RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 PSMD13Q9UNM6 376 aa12.27□□□□□ -0.44
UBR4-203ENST00000375225 ARIH1Q9Y4X5 557 aaPredicted RBP12.27□□□□□ -0.44
UBR4-203ENST00000375225 CEP350Q5VT06 3117 aa12.27□□□□□ -0.44
UBR4-203ENST00000375225 ALPK3Q96L96 1907 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 CASQ2O14958 399 aaPredicted RBP12.27□□□□□ -0.45
UBR4-203ENST00000375225 PRAMEF11O60813 436 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 RPP40O75818 363 aaKnown RBP12.27□□□□□ -0.45
UBR4-203ENST00000375225 IGLV3-27P01718 113 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 EN2P19622 333 aaPredicted RBP12.27□□□□□ -0.45
UBR4-203ENST00000375225 IMPDH1P20839 514 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 FGFR3P22607 806 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 ITGB8P26012 769 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 GMPRP36959 345 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 ETFBP38117 255 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 CHRNA4P43681 627 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 SLC11A2P49281 568 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 SH3BGRP55822 239 aaPredicted RBP12.27□□□□□ -0.45
UBR4-203ENST00000375225 DSC2Q02487 901 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 ACVR1Q04771 509 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 NSUN2Q08J23 767 aaKnown RBP eCLIP12.27□□□□□ -0.45
UBR4-203ENST00000375225 SLC10A7Q0GE19 358 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 CDC16Q13042 620 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 GPR17Q13304 367 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 MED21Q13503 144 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 MRPL58Q14197 206 aaKnown RBP12.27□□□□□ -0.45
UBR4-203ENST00000375225 FLOT2Q14254 428 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 MGAT5BQ3V5L5 792 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 MMEL1Q495T6 779 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 SIRPB2Q5JXA9 342 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 ATG14Q6ZNE5 492 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 ANKS3Q6ZW76 656 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 KDELC2Q7Z4H8 507 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 UBE2Q1Q7Z7E8 422 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 CMTR2Q8IYT2 770 aaKnown RBP12.27□□□□□ -0.45
UBR4-203ENST00000375225 ST13P4Q8IZP2 240 aaPredicted RBP12.27□□□□□ -0.45
UBR4-203ENST00000375225 LSMEM2Q8N112 164 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 TXNDC5Q8NBS9 432 aaKnown RBP12.27□□□□□ -0.45
UBR4-203ENST00000375225 BRSK1Q8TDC3 778 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 PYDC1Q8WXC3 89 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 OVCA2Q8WZ82 227 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 HDAC10Q969S8 669 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 PSMG2Q969U7 264 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 L3HYPDHQ96EM0 354 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 LRGUKQ96M69 825 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 TRAPPC9Q96Q05 1148 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 DDX50Q9BQ39 737 aaKnown RBP12.27□□□□□ -0.45
UBR4-203ENST00000375225 SHCBP1LQ9BZQ2 653 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 CCDC68Q9H2F9 335 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 ATXN3LQ9H3M9 355 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 WDR41Q9HAD4 459 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 SYTL2Q9HCH5 934 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.27□□□□□ -0.45
UBR4-203ENST00000375225 DLGAP2Q9P1A6 1054 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 SEPT3Q9UH03 358 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 PPM1HQ9ULR3 514 aa12.27□□□□□ -0.45
UBR4-203ENST00000375225 A8MT66 165 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 J3KR12 359 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 UBDO15205 165 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 VPS4BO75351 444 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 HAPLN1P10915 354 aaPredicted RBP12.26□□□□□ -0.45
UBR4-203ENST00000375225 ENO3P13929 434 aaPredicted RBP12.26□□□□□ -0.45
UBR4-203ENST00000375225 LAG3P18627 525 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 TACR2P21452 398 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 PMLP29590 882 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 INHBCP55103 352 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 FPGSQ05932 587 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 DLG1Q12959 904 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 TAF10Q12962 218 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 ZNF460Q14592 562 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 TCHHL1Q5QJ38 904 aaPredicted RBP12.26□□□□□ -0.45
UBR4-203ENST00000375225 EFL1Q7Z2Z2 1120 aaKnown RBP12.26□□□□□ -0.45
UBR4-203ENST00000375225 PTAR1Q7Z6K3 402 aaPredicted RBP12.26□□□□□ -0.45
UBR4-203ENST00000375225 CUZD1Q86UP6 607 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 KBTBD6Q86V97 674 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 PDSS2Q86YH6 399 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 MIB1Q86YT6 1006 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 HPS6Q86YV9 775 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 RNF135Q8IUD6 432 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 OR13J1Q8NGT2 312 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 GDPD5Q8WTR4 605 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 ZNF689Q96CS4 500 aaPredicted RBP12.26□□□□□ -0.45
UBR4-203ENST00000375225 RCN3Q96D15 328 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 VWCEQ96DN2 955 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 UBXN10Q96LJ8 280 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 ZNF558Q96NG5 402 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 GBP5Q96PP8 586 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 CDRT15Q96T59 188 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 SEMA3CQ99985 751 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 TTPALQ9BTX7 342 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 SLC25A23Q9BV35 468 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 GPR62Q9BZJ7 368 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 NACA2Q9H009 215 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 CWH43Q9H720 699 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 CATSPERZQ9NTU4 200 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 HCSTQ9UBK5 93 aa12.26□□□□□ -0.45
UBR4-203ENST00000375225 COPG1Q9Y678 874 aaKnown RBP12.26□□□□□ -0.45
UBR4-203ENST00000375225 MYLKQ15746 1914 aa12.25□□□□□ -0.45
UBR4-203ENST00000375225 COL4A6Q14031 1691 aa12.25□□□□□ -0.45
UBR4-203ENST00000375225 GOLGA8CPA6NN73 597 aa12.25□□□□□ -0.45
UBR4-203ENST00000375225 ZBBXA8MT70 800 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms