RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 RIN3Q8TB24 985 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 PTCD2Q8WV60 388 aaKnown RBP15.63■□□□□ 0.09
CCDC40-202ENST00000374876 ELSPBP1Q96BH3 223 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 NACA2Q9H009 215 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 C1orf21Q9H246 121 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 YY1AP1Q9H869 796 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 TRPV4Q9HBA0 871 aa15.63■□□□□ 0.09
CCDC40-202ENST00000374876 SOBPA7XYQ1 873 aa15.62■□□□□ 0.09
CCDC40-202ENST00000374876 CIB2O75838 187 aa15.62■□□□□ 0.09
CCDC40-202ENST00000374876 TM7SF2O76062 418 aa15.62■□□□□ 0.09
CCDC40-202ENST00000374876 PSMG1O95456 288 aa15.62■□□□□ 0.09
CCDC40-202ENST00000374876 AHSGP02765 367 aa15.62■□□□□ 0.09
CCDC40-202ENST00000374876 SLC2A3P11169 496 aa15.62■□□□□ 0.09
CCDC40-202ENST00000374876 MBL2P11226 248 aaPredicted RBP15.62■□□□□ 0.09
CCDC40-202ENST00000374876 MLLT6P55198 1093 aaPredicted RBP15.62■□□□□ 0.09
CCDC40-202ENST00000374876 NRG1Q02297 640 aaPredicted RBP15.62■□□□□ 0.09
CCDC40-202ENST00000374876 THOC5Q13769 683 aaKnown RBP15.62■□□□□ 0.09
CCDC40-202ENST00000374876 VWA5B1Q5TIE3 1220 aa15.62■□□□□ 0.09
CCDC40-202ENST00000374876 AFMIDQ63HM1 303 aa15.62■□□□□ 0.09
CCDC40-202ENST00000374876 DENND5AQ6IQ26 1287 aa15.62■□□□□ 0.09
CCDC40-202ENST00000374876 NAPRTQ6XQN6 538 aa15.62■□□□□ 0.09
CCDC40-202ENST00000374876 CCDC117Q8IWD4 279 aaPredicted RBP15.62■□□□□ 0.09
CCDC40-202ENST00000374876 RDH11Q8TC12 318 aa15.62■□□□□ 0.09
CCDC40-202ENST00000374876 C1orf74Q96LT6 269 aa15.62■□□□□ 0.09
CCDC40-202ENST00000374876 THTPAQ9BU02 230 aa15.62■□□□□ 0.09
CCDC40-202ENST00000374876 ACE2Q9BYF1 805 aaPredicted RBP15.62■□□□□ 0.09
CCDC40-202ENST00000374876 GKN1Q9NS71 199 aa15.62■□□□□ 0.09
CCDC40-202ENST00000374876 IPO11Q9UI26 975 aaKnown RBP15.62■□□□□ 0.09
CCDC40-202ENST00000374876 ZMYM5Q9UJ78 669 aa15.62■□□□□ 0.09
CCDC40-202ENST00000374876 PLA2G4CQ9UP65 541 aa15.62■□□□□ 0.09
CCDC40-202ENST00000374876 TLR6Q9Y2C9 796 aa15.62■□□□□ 0.09
CCDC40-202ENST00000374876 TCAF1Q9Y4C2 921 aa15.62■□□□□ 0.09
CCDC40-202ENST00000374876 CPQQ9Y646 472 aa15.62■□□□□ 0.09
CCDC40-202ENST00000374876 ZNF195O14628 629 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 PHGDHO43175 533 aaKnown RBP15.61■□□□□ 0.09
CCDC40-202ENST00000374876 ECI2O75521 394 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 KRT36O76013 467 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 OLFM2O95897 454 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 PAMP19021 973 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 ADRA1AP35348 466 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 ATP5C1P36542 298 aaKnown RBP15.61■□□□□ 0.09
CCDC40-202ENST00000374876 PSEN1P49768 467 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 SESN3P58005 492 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 USP4Q13107 963 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 TDGQ13569 410 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 SLC12A1Q13621 1099 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 C10orf120Q5SQS8 335 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 ARTNQ5T4W7 220 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 ESRP1Q6NXG1 681 aaKnown RBP15.61■□□□□ 0.09
CCDC40-202ENST00000374876 KDELC2Q7Z4H8 507 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 LCA5Q86VQ0 697 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 CNTN4Q8IWV2 1026 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 ULK2Q8IYT8 1036 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 CELF5Q8N6W0 485 aaKnown RBP15.61■□□□□ 0.09
CCDC40-202ENST00000374876 ZNF781Q8N8C0 355 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 SCYL1Q96KG9 808 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 CDH19Q9H159 772 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 OXSMQ9NWU1 459 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 CLIC5Q9NZA1 410 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 LRRC42Q9Y546 428 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.61■□□□□ 0.09
CCDC40-202ENST00000374876 SCAMP3O14828 347 aaKnown RBP15.61■□□□□ 0.09
CCDC40-202ENST00000374876 NCF2P19878 526 aaPredicted RBP15.61■□□□□ 0.09
CCDC40-202ENST00000374876 WEE1P30291 646 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 TBX4P57082 545 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 CTBP1Q13363 440 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 PIK3R6Q5UE93 754 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 ZYG11AQ6WRX3 759 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 NET1Q7Z628 596 aaPredicted RBP15.61■□□□□ 0.09
CCDC40-202ENST00000374876 SLC41A1Q8IVJ1 513 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 MFSD6LQ8IWD5 586 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 DENND6AQ8IWF6 608 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 ARHGAP18Q8N392 663 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 GPATCH11Q8N954 259 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 SH3RF2Q8TEC5 729 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 NXPE3Q969Y0 559 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 ZFYVE19Q96K21 471 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 COG4Q9H9E3 785 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 MRM3Q9HC36 420 aaKnown RBP15.61■□□□□ 0.09
CCDC40-202ENST00000374876 RUVBL2Q9Y230 463 aaKnown RBP15.61■□□□□ 0.09
CCDC40-202ENST00000374876 TRIOO75962 3097 aa15.61■□□□□ 0.09
CCDC40-202ENST00000374876 MEI4A8MW99 385 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 WASH4PA8MWX3 477 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 F8W8V4 182 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 TK2O00142 265 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 SLC35E2BP0CK96 405 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 PSMC3P17980 439 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 GABRB3P28472 473 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 ARCN1P48444 511 aaKnown RBP15.6■□□□□ 0.09
CCDC40-202ENST00000374876 POLD2P49005 469 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 CSRP3P50461 194 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 COPAP53621 1224 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 SLC7A9P82251 487 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 MPP1Q00013 466 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 EFEMP1Q12805 493 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 SEPT6Q14141 434 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 MIB1Q86YT6 1006 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 NAF1Q96HR8 494 aaKnown RBP15.6■□□□□ 0.09
CCDC40-202ENST00000374876 MRGPRX2Q96LB1 330 aa15.6■□□□□ 0.09
CCDC40-202ENST00000374876 MYCBPQ99417 103 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms