RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 HMGB4Q8WW32 186 aa20.64■□□□□ 0.89
SYNC-201ENST00000373484 PTPRN2Q92932 1015 aa20.64■□□□□ 0.89
SYNC-201ENST00000373484 OSBPL1AQ9BXW6 950 aa20.64■□□□□ 0.89
SYNC-201ENST00000373484 MTO1Q9Y2Z2 717 aaKnown RBP20.64■□□□□ 0.89
SYNC-201ENST00000373484 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.64■□□□□ 0.89
SYNC-201ENST00000373484 hCG_1818297A0A087WSY0 165 aa20.63■□□□□ 0.89
SYNC-201ENST00000373484 ARHGAP42A6NI28 874 aa20.63■□□□□ 0.89
SYNC-201ENST00000373484 K7ERQ8 282 aa20.63■□□□□ 0.89
SYNC-201ENST00000373484 NDUFV2P19404 249 aa20.63■□□□□ 0.89
SYNC-201ENST00000373484 OCRLQ01968 901 aa20.63■□□□□ 0.89
SYNC-201ENST00000373484 DLG2Q15700 870 aa20.63■□□□□ 0.89
SYNC-201ENST00000373484 C11orf91Q3C1V1 193 aa20.63■□□□□ 0.89
SYNC-201ENST00000373484 C9orf64Q5T6V5 341 aa20.63■□□□□ 0.89
SYNC-201ENST00000373484 LVRNQ6Q4G3 990 aa20.63■□□□□ 0.89
SYNC-201ENST00000373484 RNF157Q96PX1 679 aa20.63■□□□□ 0.89
SYNC-201ENST00000373484 MKRN2Q9H000 416 aaKnown RBP20.63■□□□□ 0.89
SYNC-201ENST00000373484 FBRSQ9HAH7 460 aa20.63■□□□□ 0.89
SYNC-201ENST00000373484 SPATS2LQ9NUQ6 558 aaKnown RBP20.63■□□□□ 0.89
SYNC-201ENST00000373484 RABGEF1Q9UJ41 708 aa20.63■□□□□ 0.89
SYNC-201ENST00000373484 AXIN1O15169 862 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 SMAD6O43541 496 aaKnown RBP20.62■□□□□ 0.89
SYNC-201ENST00000373484 SIN3BO75182 1162 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 C7P10643 843 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 VAV1P15498 845 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 GM2AP17900 193 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 PAPOLAP51003 745 aaKnown RBP20.62■□□□□ 0.89
SYNC-201ENST00000373484 PAFAH1B3Q15102 231 aaKnown RBP20.62■□□□□ 0.89
SYNC-201ENST00000373484 TAF1BQ53T94 588 aaPredicted RBP20.62■□□□□ 0.89
SYNC-201ENST00000373484 NCBP2-AS2Q69YL0 99 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 MFSD7Q6UXD7 560 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 TP53INP2Q8IXH6 220 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 ZBED8Q8IZ13 594 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 KIRREL3Q8IZU9 778 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 PQLC3Q8N755 202 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 NETO2Q8NC67 525 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 OR2T3Q8NH03 318 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 DNAJC9Q8WXX5 260 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 MRGPRX1Q96LB2 322 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 BTBD10Q9BSF8 475 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 TRIM55Q9BYV6 548 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 DENND2DQ9H6A0 471 aaPredicted RBP20.62■□□□□ 0.89
SYNC-201ENST00000373484 PCDHGA2Q9Y5H1 932 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 ACTL7AQ9Y615 435 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 ZBTB24O43167 697 aaPredicted RBP20.62■□□□□ 0.89
SYNC-201ENST00000373484 FESP07332 822 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 VHLP40337 213 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 PDIA2Q13087 525 aaKnown RBP20.62■□□□□ 0.89
SYNC-201ENST00000373484 SEPT7Q16181 437 aaKnown RBP20.62■□□□□ 0.89
SYNC-201ENST00000373484 TAZQ16635 292 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 IRGCQ6NXR0 463 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 BANPQ8N9N5 519 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 MZB1Q8WU39 189 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 MAK16Q9BXY0 300 aaKnown RBP20.62■□□□□ 0.89
SYNC-201ENST00000373484 TPSD1Q9BZJ3 242 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 RAPGEFL1Q9UHV5 662 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 VPS13AQ96RL7 3174 aa20.62■□□□□ 0.89
SYNC-201ENST00000373484 SPAG17Q6Q759 2223 aa20.61■□□□□ 0.89
SYNC-201ENST00000373484 DFFAO00273 331 aa20.61■□□□□ 0.89
SYNC-201ENST00000373484 AHCYL1O43865 530 aa20.61■□□□□ 0.89
SYNC-201ENST00000373484 KRT4P19013 534 aa20.61■□□□□ 0.89
SYNC-201ENST00000373484 CDKN2BP42772 138 aa20.61■□□□□ 0.89
SYNC-201ENST00000373484 PTDSS1P48651 473 aaKnown RBP20.61■□□□□ 0.89
SYNC-201ENST00000373484 KLC1Q07866 573 aa20.61■□□□□ 0.89
SYNC-201ENST00000373484 C22orf39Q6P5X5 142 aa20.61■□□□□ 0.89
SYNC-201ENST00000373484 Q6ZVU0 165 aa20.61■□□□□ 0.89
SYNC-201ENST00000373484 TMPRSS6Q8IU80 811 aa20.61■□□□□ 0.89
SYNC-201ENST00000373484 C4orf33Q8N1A6 199 aa20.61■□□□□ 0.89
SYNC-201ENST00000373484 PGBD3Q8N328 593 aa20.61■□□□□ 0.89
SYNC-201ENST00000373484 SPOCK2Q92563 424 aa20.61■□□□□ 0.89
SYNC-201ENST00000373484 CEP44Q9C0F1 390 aa20.61■□□□□ 0.89
SYNC-201ENST00000373484 SLC6A17Q9H1V8 727 aa20.61■□□□□ 0.89
SYNC-201ENST00000373484 PDFQ9HBH1 243 aa20.61■□□□□ 0.89
SYNC-201ENST00000373484 ARIH1Q9Y4X5 557 aaPredicted RBP20.61■□□□□ 0.89
SYNC-201ENST00000373484 CEP192Q8TEP8 1941 aa20.61■□□□□ 0.89
SYNC-201ENST00000373484 KLF11O14901 512 aa20.6■□□□□ 0.89
SYNC-201ENST00000373484 MFSD11O43934 449 aa20.6■□□□□ 0.89
SYNC-201ENST00000373484 PRAMEF11O60813 436 aa20.6■□□□□ 0.89
SYNC-201ENST00000373484 LILRB5O75023 590 aa20.6■□□□□ 0.89
SYNC-201ENST00000373484 ZNF821O75541 412 aaPredicted RBP20.6■□□□□ 0.89
SYNC-201ENST00000373484 SPAG6O75602 509 aa20.6■□□□□ 0.89
SYNC-201ENST00000373484 DHRS4L1P0CG22 281 aa20.6■□□□□ 0.89
SYNC-201ENST00000373484 CCNHP51946 323 aaPredicted RBP20.6■□□□□ 0.89
SYNC-201ENST00000373484 GPX6P59796 221 aa20.6■□□□□ 0.89
SYNC-201ENST00000373484 CDK18Q07002 472 aa20.6■□□□□ 0.89
SYNC-201ENST00000373484 PRUNE1Q86TP1 453 aa20.6■□□□□ 0.89
SYNC-201ENST00000373484 ARHGAP24Q8N264 748 aa20.6■□□□□ 0.89
SYNC-201ENST00000373484 ZNF483Q8TF39 744 aaPredicted RBP20.6■□□□□ 0.89
SYNC-201ENST00000373484 PYROXD1Q8WU10 500 aa20.6■□□□□ 0.89
SYNC-201ENST00000373484 PTCD3Q96EY7 689 aaKnown RBP20.6■□□□□ 0.89
SYNC-201ENST00000373484 NSL1Q96IY1 281 aa20.6■□□□□ 0.89
SYNC-201ENST00000373484 RSPH9Q9H1X1 276 aaPredicted RBP20.6■□□□□ 0.89
SYNC-201ENST00000373484 PRDM16Q9HAZ2 1276 aa20.6■□□□□ 0.89
SYNC-201ENST00000373484 LRCH1Q9Y2L9 728 aa20.6■□□□□ 0.89
SYNC-201ENST00000373484 J3KR12 359 aa20.6■□□□□ 0.89
SYNC-201ENST00000373484 HAUS5O94927 633 aa20.6■□□□□ 0.89
SYNC-201ENST00000373484 LINGO3P0C6S8 592 aa20.6■□□□□ 0.89
SYNC-201ENST00000373484 FASTKD3Q14CZ7 662 aaKnown RBP20.6■□□□□ 0.89
SYNC-201ENST00000373484 INO80DQ53TQ3 878 aaPredicted RBP20.6■□□□□ 0.89
SYNC-201ENST00000373484 SLC9A4Q6AI14 798 aa20.6■□□□□ 0.89
SYNC-201ENST00000373484 ZC3H14Q6PJT7 736 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms