RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 SLC7A4O43246 635 aa10.64□□□□□ -0.71
PGK1-201ENST00000373316 IL1BP01584 269 aa10.64□□□□□ -0.71
PGK1-201ENST00000373316 ASMTP46597 345 aa10.64□□□□□ -0.71
PGK1-201ENST00000373316 WNT7BP56706 349 aa10.64□□□□□ -0.71
PGK1-201ENST00000373316 RPL7AP62424 266 aaKnown RBP10.64□□□□□ -0.71
PGK1-201ENST00000373316 DAB2P98082 770 aa10.64□□□□□ -0.71
PGK1-201ENST00000373316 TRAF3Q13114 568 aa10.64□□□□□ -0.71
PGK1-201ENST00000373316 C15orf59Q2T9L4 293 aaPredicted RBP10.64□□□□□ -0.71
PGK1-201ENST00000373316 CMPK2Q5EBM0 449 aa10.64□□□□□ -0.71
PGK1-201ENST00000373316 FAM228AQ86W67 206 aa10.64□□□□□ -0.71
PGK1-201ENST00000373316 ZCCHC7Q8N3Z6 543 aaKnown RBP10.64□□□□□ -0.71
PGK1-201ENST00000373316 PTGR2Q8N8N7 351 aaPredicted RBP10.64□□□□□ -0.71
PGK1-201ENST00000373316 RFWD2Q8NHY2 731 aa10.64□□□□□ -0.71
PGK1-201ENST00000373316 ACOX2Q99424 681 aa10.64□□□□□ -0.71
PGK1-201ENST00000373316 RNPEPQ9H4A4 650 aa10.64□□□□□ -0.71
PGK1-201ENST00000373316 LCTP09848 1927 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 CBX4O00257 560 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 CCNDBP1O95273 360 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 GUCA1CO95843 209 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 USP17L7P0C7H9 530 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 MLH1P40692 756 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 MBTD1Q05BQ5 628 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 ECHDC2Q86YB7 292 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 CMASQ8NFW8 434 aaPredicted RBP10.63□□□□□ -0.71
PGK1-201ENST00000373316 OR4L1Q8NH43 312 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 B4GALNT2Q8NHY0 566 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 BORCS5Q969J3 196 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 MYLPFQ96A32 169 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 POLE3Q9NRF9 147 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 DHRS12A0PJE2 317 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 PRR23D1E9PI22 279 aaPredicted RBP10.63□□□□□ -0.71
PGK1-201ENST00000373316 PLK4O00444 970 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 SCELO95171 688 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 CCDC166P0CW27 439 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 PRR23D2P0DMB1 279 aaPredicted RBP10.63□□□□□ -0.71
PGK1-201ENST00000373316 COL6A1P12109 1028 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 RAB14P61106 215 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 ACSM2AQ08AH3 577 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 LAPTM5Q13571 262 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 LSM12Q3MHD2 195 aaKnown RBP10.63□□□□□ -0.71
PGK1-201ENST00000373316 ACSM2BQ68CK6 577 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 CDCA2Q69YH5 1023 aaPredicted RBP10.63□□□□□ -0.71
PGK1-201ENST00000373316 ZDHHC24Q6UX98 284 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 FUBP3Q96I24 572 aaKnown RBP eCLIP10.63□□□□□ -0.717e-6■■■□□ 15.7
PGK1-201ENST00000373316 TEFMQ96QE5 360 aaKnown RBP10.63□□□□□ -0.71
PGK1-201ENST00000373316 ARHGAP39Q9C0H5 1083 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 PDZD7Q9H5P4 517 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 EXOSC4Q9NPD3 245 aaKnown RBP10.63□□□□□ -0.71
PGK1-201ENST00000373316 CD320Q9NPF0 282 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 SPG21Q9NZD8 308 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 LIMD1Q9UGP4 676 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 XIRP2A4UGR9 3374 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 MATN3O15232 486 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 NRP2O60462 931 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 ZBTB48P10074 688 aaPredicted RBP10.63□□□□□ -0.71
PGK1-201ENST00000373316 TFEBP19484 476 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 NAGLUP54802 743 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 WSCD1Q658N2 575 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 PLEKHO2Q8TD55 490 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 HAPLN3Q96S86 360 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 MAGEH1Q9H213 219 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 PALMDQ9NP74 551 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 DIABLOQ9NR28 239 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.63□□□□□ -0.716e-7■□□□□ 10.2
PGK1-201ENST00000373316 GSTK1Q9Y2Q3 226 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 GNG14A0A1W2PPG7 69 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 PEX1O43933 1283 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 GSTT1P30711 240 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 PLK1P53350 603 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 SGO1Q5FBB7 561 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 NOMO2Q5JPE7 1267 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 TCHHL1Q5QJ38 904 aaPredicted RBP10.63□□□□□ -0.71
PGK1-201ENST00000373316 PROX1Q92786 737 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 TDRD1Q9BXT4 1180 aaKnown RBP10.63□□□□□ -0.71
PGK1-201ENST00000373316 EPB41L4BQ9H329 900 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 VPS4AQ9UN37 437 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 MYH11P35749 1972 aa10.63□□□□□ -0.71
PGK1-201ENST00000373316 RBBP6Q7Z6E9 1792 aaKnown RBP10.62□□□□□ -0.71
PGK1-201ENST00000373316 PLIN3O60664 434 aa10.62□□□□□ -0.71
PGK1-201ENST00000373316 ZNF682O95780 498 aa10.62□□□□□ -0.71
PGK1-201ENST00000373316 CKBP12277 381 aa10.62□□□□□ -0.71
PGK1-201ENST00000373316 HGFP14210 728 aa10.62□□□□□ -0.71
PGK1-201ENST00000373316 GRK4P32298 578 aa10.62□□□□□ -0.71
PGK1-201ENST00000373316 GPC1P35052 558 aa10.62□□□□□ -0.71
PGK1-201ENST00000373316 SCNN1GP51170 649 aa10.62□□□□□ -0.71
PGK1-201ENST00000373316 ADARP55265 1226 aaKnown RBP10.62□□□□□ -0.71
PGK1-201ENST00000373316 RAB25P57735 213 aa10.62□□□□□ -0.71
PGK1-201ENST00000373316 TCEA2Q15560 299 aa10.62□□□□□ -0.71
PGK1-201ENST00000373316 DPY19L1Q2PZI1 675 aa10.62□□□□□ -0.71
PGK1-201ENST00000373316 AADACL2Q6P093 401 aa10.62□□□□□ -0.71
PGK1-201ENST00000373316 IKBIPQ70UQ0 350 aa10.62□□□□□ -0.71
PGK1-201ENST00000373316 ADCK2Q7Z695 626 aa10.62□□□□□ -0.71
PGK1-201ENST00000373316 SLC41A1Q8IVJ1 513 aa10.62□□□□□ -0.71
PGK1-201ENST00000373316 OR2T34Q8NGX1 318 aa10.62□□□□□ -0.71
PGK1-201ENST00000373316 OR2T3Q8NH03 318 aa10.62□□□□□ -0.71
PGK1-201ENST00000373316 CELF6Q96J87 481 aaKnown RBP10.62□□□□□ -0.71
PGK1-201ENST00000373316 FANCEQ9HB96 536 aa10.62□□□□□ -0.71
PGK1-201ENST00000373316 FZD10Q9ULW2 581 aa10.62□□□□□ -0.71
PGK1-201ENST00000373316 TCAF1Q9Y4C2 921 aa10.62□□□□□ -0.71
PGK1-201ENST00000373316 CASTOR2A6NHX0 329 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms