RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 TNNI3P19429 210 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 PEX2P28328 305 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 BRSK2Q8IWQ3 736 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 CLPTM1LQ96KA5 538 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 PANX1Q96RD7 426 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 TP73O15350 636 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 VDRP11473 427 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 ACTR3P61158 418 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 MXD1Q05195 221 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 RPA4Q13156 261 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 MARC1Q5VT66 337 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 HLA-DQA1Q5Y7H0 255 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 OXR1Q8N573 874 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 RXFP2Q8WXD0 754 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 PLD2O14939 933 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 BAG6P46379 1132 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 RPS9P46781 194 aaKnown RBP15.3■□□□□ 0.04
COL5A1-201ENST00000371817 RBM15BQ8NDT2 890 aaKnown RBP15.3■□□□□ 0.04
COL5A1-201ENST00000371817 DNAJC18Q9H819 358 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 HSPB11Q9Y547 144 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 CACNA1CQ13936 2221 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 PNPLA7Q6ZV29 1317 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 SLC22A3O75751 556 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 IPO13O94829 963 aaKnown RBP15.3■□□□□ 0.04
COL5A1-201ENST00000371817 NUDT7P0C024 238 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 DRG2P55039 364 aaKnown RBP15.3■□□□□ 0.04
COL5A1-201ENST00000371817 LIPEQ05469 1076 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 ZNF431Q8TF32 576 aaPredicted RBP15.3■□□□□ 0.04
COL5A1-201ENST00000371817 HSPBAP1Q96EW2 488 aa15.3■□□□□ 0.04
COL5A1-201ENST00000371817 PIH1D1Q9NWS0 290 aaKnown RBP15.3■□□□□ 0.04
COL5A1-201ENST00000371817 LOC102724428A0A0B4J2F2 783 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 PDPK1O15530 556 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 GJA1P17302 382 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 SIK1P57059 783 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 MADCAM1Q13477 382 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 GPR162Q16538 588 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 AMHR2Q16671 573 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 KAT8Q9H7Z6 458 aaKnown RBP15.29■□□□□ 0.04
COL5A1-201ENST00000371817 TAS2R3Q9NYW6 316 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 ZNF609O15014 1411 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 ITGAVP06756 1048 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 OR56A5P0C7T3 313 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 SLC15A1P46059 708 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 SLC10A7Q0GE19 358 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 DCP1BQ8IZD4 617 aaKnown RBP15.29■□□□□ 0.04
COL5A1-201ENST00000371817 SEC14L1Q92503 715 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 PCDH10Q9P2E7 1040 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 ZNF335Q9H4Z2 1342 aaPredicted RBP15.29■□□□□ 0.04
COL5A1-201ENST00000371817 MAGEC1O60732 1142 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 RPS6KA4O75676 772 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 GNA12Q03113 381 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 LAPTM4BQ86VI4 370 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 ZFAND2BQ8WV99 257 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 EBF3Q9H4W6 596 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 TRIP11Q15643 1979 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 TRIM64A6NGJ6 449 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 TRIM64BA6NI03 449 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 ACSL4O60488 711 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 PCID2Q5JVF3 399 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 ATCAYQ86WG3 371 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 NUDT15Q9NV35 164 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 LCN1P31025 176 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 CBLBQ13191 982 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 DPYSL3Q14195 570 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 OSGEPL1Q9H4B0 414 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 PDP1Q9P0J1 537 aaPredicted RBP15.29■□□□□ 0.04
COL5A1-201ENST00000371817 KLHL33A6NCF5 533 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 CLCA1A8K7I4 914 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 DNAJA2O60884 412 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 CCR1P32246 355 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 LINGO2Q7L985 606 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 ZNF354BQ96LW1 612 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 ETNK2Q9NVF9 386 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 GMIPQ9P107 970 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 OVOS2A0A0G2JMS6 1433 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 FBXO21O94952 628 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 ILF3Q12906 894 aaKnown RBP eCLIP15.29■□□□□ 0.04
COL5A1-201ENST00000371817 BOP1Q14137 746 aaKnown RBP15.29■□□□□ 0.04
COL5A1-201ENST00000371817 SLC22A16Q86VW1 577 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 BPIFB1Q8TDL5 484 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 UBE2E3Q969T4 207 aa15.29■□□□□ 0.04
COL5A1-201ENST00000371817 DENND2DQ9H6A0 471 aaPredicted RBP15.29■□□□□ 0.04
COL5A1-201ENST00000371817 ZNF214Q9UL59 606 aaPredicted RBP15.29■□□□□ 0.04
COL5A1-201ENST00000371817 SHOX2O60902 331 aaPredicted RBP15.28■□□□□ 0.04
COL5A1-201ENST00000371817 GADD45AP24522 165 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 TAF6P49848 677 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 ACVR2BQ13705 512 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 ZNF248Q8NDW4 579 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 NCOA3Q9Y6Q9 1424 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 APOC4-APOC2K7ER74 178 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 APOC2P02655 101 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 PPIBP23284 216 aaKnown RBP15.28■□□□□ 0.04
COL5A1-201ENST00000371817 ADNP2Q6IQ32 1131 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 SLC41A1Q8IVJ1 513 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 MCOLN2Q8IZK6 566 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 CBR4Q8N4T8 237 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 ABI2Q9NYB9 513 aaPredicted RBP15.28■□□□□ 0.04
COL5A1-201ENST00000371817 SPATA31E1Q6ZUB1 1445 aa15.28■□□□□ 0.04
COL5A1-201ENST00000371817 PLA2G4EQ3MJ16 856 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms