RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 NUP93Q8N1F7 819 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 TRPC4APQ8TEL6 797 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 CANT1Q8WVQ1 401 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 C19orf60Q96EN9 201 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 ZNF512Q96ME7 567 aaPredicted RBP12.37□□□□□ -0.43
PTPN7-202ENST00000367279 ACBD6Q9BR61 282 aa12.37□□□□□ -0.43
PTPN7-202ENST00000367279 MRPL40Q9NQ50 206 aaKnown RBP12.37□□□□□ -0.43
PTPN7-202ENST00000367279 CNOT6Q9ULM6 557 aaKnown RBP12.37□□□□□ -0.43
PTPN7-202ENST00000367279 UBXN8O00124 270 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 ANGPT2O15123 496 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 LINC00032P0C843 101 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 CYP2C18P33260 490 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 RENBPP51606 427 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 LRP8Q14114 963 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 RFTN1Q14699 578 aaPredicted RBP12.36□□□□□ -0.43
PTPN7-202ENST00000367279 FUT11Q495W5 492 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 BRMS1LQ5PSV4 323 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 SCIMPQ6UWF3 145 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 SPPL2CQ8IUH8 684 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 PELI3Q8N2H9 469 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 MAELQ96JY0 434 aaKnown RBP12.36□□□□□ -0.43
PTPN7-202ENST00000367279 CSNK1G1Q9HCP0 422 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 MYLKQ15746 1914 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 A0A0J9YYE9 177 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 RNF103-CHMP3A0A140T963 221 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 ARHGAP10A1A4S6 786 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 PDLIM1O00151 329 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 CHRM3P20309 590 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 DNAJB13P59910 316 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 RPL26P61254 145 aaKnown RBP12.36□□□□□ -0.43
PTPN7-202ENST00000367279 RHDQ02161 417 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 IKBKEQ14164 716 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 ALFQ53S48 1182 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 SAMD4BQ5PRF9 694 aaKnown RBP12.36□□□□□ -0.43
PTPN7-202ENST00000367279 TBCELQ5QJ74 424 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 RAP1GAP2Q684P5 730 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 RAB44Q7Z6P3 723 aaPredicted RBP12.36□□□□□ -0.43
PTPN7-202ENST00000367279 SLC22A9Q8IVM8 553 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 NCSTNQ92542 709 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 DPF3Q92784 378 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 TMIGD2Q96BF3 282 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 NSUN5Q96P11 429 aaKnown RBP12.36□□□□□ -0.43
PTPN7-202ENST00000367279 SLC25A51Q9H1U9 297 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 MEAF6Q9HAF1 191 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 SUCOQ9UBS9 1254 aaKnown RBP12.36□□□□□ -0.43
PTPN7-202ENST00000367279 FAM50BQ9Y247 325 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 ARL5AQ9Y689 179 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 SUPT3HB4E1H0 165 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 SUPT3HO75486 399 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 PRSS56P0CW18 603 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 GRK4P32298 578 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 CSRP3P50461 194 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 ACAP2Q15057 778 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 GDF6Q6KF10 455 aaPredicted RBP12.36□□□□□ -0.43
PTPN7-202ENST00000367279 TAF2Q6P1X5 1199 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 TMEM207Q6UWW9 146 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 ANKRD23Q86SG2 305 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 SCD5Q86SK9 330 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 CILP2Q8IUL8 1156 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 PCYOX1LQ8NBM8 494 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 ZC3H15Q8WU90 426 aaKnown RBP12.36□□□□□ -0.43
PTPN7-202ENST00000367279 PTCD2Q8WV60 388 aaKnown RBP12.36□□□□□ -0.43
PTPN7-202ENST00000367279 RPL10LQ96L21 214 aaKnown RBP12.36□□□□□ -0.43
PTPN7-202ENST00000367279 GSTO2Q9H4Y5 243 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 AKTIPQ9H8T0 292 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 SEMA4BQ9NPR2 832 aaPredicted RBP12.36□□□□□ -0.43
PTPN7-202ENST00000367279 UTP6Q9NYH9 597 aaKnown RBP12.36□□□□□ -0.43
PTPN7-202ENST00000367279 NEU3Q9UQ49 428 aa12.36□□□□□ -0.43
PTPN7-202ENST00000367279 HAS3O00219 553 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 PIP5K1BO14986 540 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 ZNF26P17031 533 aaPredicted RBP12.35□□□□□ -0.43
PTPN7-202ENST00000367279 POLD2P49005 469 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 TBX4P57082 545 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 PURAQ00577 322 aaKnown RBP12.35□□□□□ -0.43
PTPN7-202ENST00000367279 ECT2LQ008S8 904 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 YWHAHQ04917 246 aaPredicted RBP12.35□□□□□ -0.43
PTPN7-202ENST00000367279 SIRPB2Q5JXA9 342 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 PIK3R6Q5UE93 754 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 ZNF786Q8N393 782 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 FAM47BQ8NA70 645 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 OR13J1Q8NGT2 312 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 EZH1Q92800 747 aaPredicted RBP12.35□□□□□ -0.43
PTPN7-202ENST00000367279 PTERQ96BW5 349 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 TRIM62Q9BVG3 475 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 PTTG2Q9NZH5 202 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 TBC1D30Q9Y2I9 924 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 PRG3Q9Y2Y8 225 aaPredicted RBP12.35□□□□□ -0.43
PTPN7-202ENST00000367279 PLOD2O00469 737 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 CACNG3O60359 315 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 SOAT2O75908 522 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 CHRNA1P02708 482 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 MT-ND1P03886 318 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 SLC2A3P11169 496 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 IMPDH1P20839 514 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 CES1P23141 567 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 RPL9P32969 192 aaKnown RBP12.35□□□□□ -0.43
PTPN7-202ENST00000367279 NR1H2P55055 460 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 FOXA1P55317 472 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 GRB7Q14451 532 aa12.35□□□□□ -0.43
PTPN7-202ENST00000367279 TICAM1Q8IUC6 712 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms