RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 KIAA0895Q8NCT3 520 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF248Q8NDW4 579 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 KCNJ9Q92806 393 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 PKP4Q99569 1192 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 SLC52A2Q9HAB3 445 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 MTX2O75431 263 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 SLC4A1P02730 911 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ECI1P42126 302 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 COX10Q12887 443 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 LAPTM4AQ15012 233 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ANKRD54Q6NXT1 300 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 C3orf33Q6P1S2 294 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 SMAP2Q8WU79 429 aaPredicted RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 POMGNT1Q8WZA1 660 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 C18orf8Q96DM3 657 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 CHFRQ96EP1 664 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 DPYSL5Q9BPU6 564 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ZSCAN5AQ9BUG6 496 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ATG12O94817 140 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 GH1P01241 217 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ARHGDIBP52566 201 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 LPCAT1Q8NF37 534 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF578Q96N58 590 aaPredicted RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 KLHL28Q9NXS3 571 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 SMPD3Q9NY59 655 aaPredicted RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 TMEM59LQ9UK28 342 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 PLOD2O00469 737 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 SLC6A4P31645 630 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 RIN1Q13671 783 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ANKDD1AQ495B1 522 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 MOB2Q70IA6 237 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 TMEM199Q8N511 208 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 KCNS3Q9BQ31 491 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ZCCHC2Q9C0B9 1178 aaKnown RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 PSAPP07602 524 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 EIF2S3P41091 472 aaKnown RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 SLC1A2P43004 574 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 EIF2S3LQ2VIR3 472 aaKnown RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 P2RY8Q86VZ1 359 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 TMEM203Q969S6 136 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 BARD1Q99728 777 aaKnown RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 SLC2A9Q9NRM0 540 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 CLTCL1P53675 1640 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 NSG1A0A0A6YYJ2 146 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 A0A1W2PRQ8 180 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 SERPINF2P08697 491 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 CSH1P0DML2 217 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 CSH2P0DML3 217 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 NSG1P42857 185 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 DGCR6Q14129 220 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 VMACQ2NL98 169 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 TMEM179Q6ZVK1 233 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 STT3BQ8TCJ2 826 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 MAPKAP1Q9BPZ7 522 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 MRPL4Q9BYD3 311 aaKnown RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 CKLFQ9UBR5 152 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 SLC12A8A0AV02 714 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 UGT1A9O60656 530 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 HSD17B3P37058 310 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 GRIA3P42263 894 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ELAVL2Q12926 359 aaKnown RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 PRKD1Q15139 912 aaPredicted RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 KCTD1Q719H9 257 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 SLC22A8Q8TCC7 542 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 UGT1A7Q9HAW7 530 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 UGT1A10Q9HAW8 530 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 UGT1A8Q9HAW9 530 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 RC3H2Q9HBD1 1191 aaKnown RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 NLKQ9UBE8 527 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 A8MVJ9 347 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 APOC1P02654 83 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 CERCAMQ5T4B2 595 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 CLNKQ7Z7G1 428 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 KIAA1958Q8N8K9 716 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ECSITQ9BQ95 431 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 SYT4Q9H2B2 425 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 SERHL2Q9H4I8 314 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 SERHLQ9NQF3 203 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 EMILIN3Q9NT22 766 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 PHF24Q9UPV7 400 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ACOX3O15254 700 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 SSX4O60224 188 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 DDNO94850 711 aaPredicted RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 TAL1P17542 331 aaPredicted RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 FKBP1AP62942 108 aaKnown RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 POU4F1Q01851 419 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 GJB7Q6PEY0 223 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 HEPHQ9BQS7 1158 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 MGAT4AQ9UM21 535 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 NFASCO94856 1347 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 PKNOX1P55347 436 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 TAP2Q03519 686 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 PRKCDQ05655 676 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 PDZK1Q5T2W1 519 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 IDO2Q6ZQW0 420 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ELMOD3Q96FG2 381 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ROGDIQ9GZN7 287 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 CBY1Q9Y3M2 126 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 PP2D1A8MPX8 630 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms