RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 GSRP00390 522 aa12.28□□□□□ -0.44
CAPN9-203ENST00000366666 APODP05090 189 aa12.28□□□□□ -0.44
CAPN9-203ENST00000366666 UGT2B4P06133 528 aa12.28□□□□□ -0.44
CAPN9-203ENST00000366666 NEFHP12036 1026 aa12.28□□□□□ -0.44
CAPN9-203ENST00000366666 TIE1P35590 1138 aa12.28□□□□□ -0.44
CAPN9-203ENST00000366666 NNMTP40261 264 aa12.28□□□□□ -0.44
CAPN9-203ENST00000366666 KIR2DL1P43626 348 aaPredicted RBP12.28□□□□□ -0.44
CAPN9-203ENST00000366666 CSNK1DP48730 415 aa12.28□□□□□ -0.44
CAPN9-203ENST00000366666 NPY2RP49146 381 aa12.28□□□□□ -0.44
CAPN9-203ENST00000366666 NCALDP61601 193 aa12.28□□□□□ -0.44
CAPN9-203ENST00000366666 BCL2L1Q07817 233 aa12.28□□□□□ -0.44
CAPN9-203ENST00000366666 EIF4HQ15056 248 aaKnown RBP12.28□□□□□ -0.44
CAPN9-203ENST00000366666 PDCD2Q16342 344 aaPredicted RBP12.28□□□□□ -0.44
CAPN9-203ENST00000366666 LONRF1Q17RB8 773 aa12.28□□□□□ -0.44
CAPN9-203ENST00000366666 FSTL4Q6MZW2 842 aa12.28□□□□□ -0.44
CAPN9-203ENST00000366666 METTL3Q86U44 580 aaKnown RBP12.28□□□□□ -0.44
CAPN9-203ENST00000366666 PNPLA1Q8N8W4 532 aa12.28□□□□□ -0.44
CAPN9-203ENST00000366666 MDGA1Q8NFP4 955 aa12.28□□□□□ -0.44
CAPN9-203ENST00000366666 BLOC1S5Q8TDH9 187 aa12.28□□□□□ -0.44
CAPN9-203ENST00000366666 FBF1Q8TES7 1133 aa12.28□□□□□ -0.44
CAPN9-203ENST00000366666 PIH1D2Q8WWB5 315 aa12.28□□□□□ -0.44
CAPN9-203ENST00000366666 LRRC39Q96DD0 335 aa12.28□□□□□ -0.44
CAPN9-203ENST00000366666 MRRFQ96E11 262 aaKnown RBP12.28□□□□□ -0.44
CAPN9-203ENST00000366666 PPP1R2P1Q96PQ5 205 aa12.28□□□□□ -0.44
CAPN9-203ENST00000366666 SMYD2Q9NRG4 433 aa12.28□□□□□ -0.44
CAPN9-203ENST00000366666 ABCF3Q9NUQ8 709 aa12.28□□□□□ -0.44
CAPN9-203ENST00000366666 CTNNAL1Q9UBT7 734 aa12.28□□□□□ -0.44
CAPN9-203ENST00000366666 RABGEF1Q9UJ41 708 aa12.28□□□□□ -0.44
CAPN9-203ENST00000366666 ARL5AQ9Y689 179 aa12.28□□□□□ -0.44
CAPN9-203ENST00000366666 SCN8AQ9UQD0 1980 aa12.27□□□□□ -0.44
CAPN9-203ENST00000366666 ZCWPW2A0A1B0GU75 182 aa12.27□□□□□ -0.45
CAPN9-203ENST00000366666 A8MX80 341 aa12.27□□□□□ -0.45
CAPN9-203ENST00000366666 CXorf49A8MYA2 514 aaPredicted RBP12.27□□□□□ -0.45
CAPN9-203ENST00000366666 FOXO6A8MYZ6 492 aa12.27□□□□□ -0.45
CAPN9-203ENST00000366666 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.27□□□□□ -0.45
CAPN9-203ENST00000366666 TCP11X1B4DZS4 312 aa12.27□□□□□ -0.45
CAPN9-203ENST00000366666 ANKRD66B4E2M5 251 aa12.27□□□□□ -0.45
CAPN9-203ENST00000366666 HTRA2O43464 458 aaPredicted RBP12.27□□□□□ -0.45
CAPN9-203ENST00000366666 LEFTY1O75610 366 aa12.27□□□□□ -0.45
CAPN9-203ENST00000366666 PGLSO95336 258 aa12.27□□□□□ -0.45
CAPN9-203ENST00000366666 EPOP01588 193 aa12.27□□□□□ -0.45
CAPN9-203ENST00000366666 CES1P23141 567 aa12.27□□□□□ -0.45
CAPN9-203ENST00000366666 CCND1P24385 295 aa12.27□□□□□ -0.45
CAPN9-203ENST00000366666 ST8SIA6P61647 398 aa12.27□□□□□ -0.45
CAPN9-203ENST00000366666 SEPT6Q14141 434 aa12.27□□□□□ -0.45
CAPN9-203ENST00000366666 SLC14A2Q15849 920 aa12.27□□□□□ -0.45
CAPN9-203ENST00000366666 C2orf27AQ580R0 203 aa12.27□□□□□ -0.45
CAPN9-203ENST00000366666 ARSIQ5FYB1 569 aa12.27□□□□□ -0.45
CAPN9-203ENST00000366666 C9orf64Q5T6V5 341 aa12.27□□□□□ -0.45
CAPN9-203ENST00000366666 SERPINA13PQ6UXR4 307 aa12.27□□□□□ -0.45
CAPN9-203ENST00000366666 TMEM135Q86UB9 458 aa12.27□□□□□ -0.45
CAPN9-203ENST00000366666 STK40Q8N2I9 435 aa12.27□□□□□ -0.45
CAPN9-203ENST00000366666 ZNF669Q96BR6 464 aaPredicted RBP12.27□□□□□ -0.45
CAPN9-203ENST00000366666 GRAMD1AQ96CP6 724 aa12.27□□□□□ -0.45
CAPN9-203ENST00000366666 IL22Q9GZX6 179 aa12.27□□□□□ -0.45
CAPN9-203ENST00000366666 TRPV5Q9NQA5 729 aa12.27□□□□□ -0.45
CAPN9-203ENST00000366666 POLR3BQ9NW08 1133 aaPredicted RBP12.27□□□□□ -0.45
CAPN9-203ENST00000366666 THAP10Q9P2Z0 257 aaPredicted RBP12.27□□□□□ -0.45
CAPN9-203ENST00000366666 RPS6KL1Q9Y6S9 549 aa12.27□□□□□ -0.45
CAPN9-203ENST00000366666 TMEM120BA0PK00 339 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 GOLGA8TH3BQL2 631 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 TIMM44O43615 452 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 LDB2O43679 373 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 UGT1A9O60656 530 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 POP4O95707 220 aaKnown RBP12.26□□□□□ -0.45
CAPN9-203ENST00000366666 SLC4A1P02730 911 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 FGF1P05230 155 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 HLA-DPA1P20036 260 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 GCAP28676 217 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 SKIV2L2P42285 1042 aaKnown RBP12.26□□□□□ -0.45
CAPN9-203ENST00000366666 ABL2P42684 1182 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 TDGQ13569 410 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 NAA25Q14CX7 972 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 HNRNPA1L2Q32P51 320 aaKnown RBP12.26□□□□□ -0.45
CAPN9-203ENST00000366666 ESRP1Q6NXG1 681 aaKnown RBP12.26□□□□□ -0.45
CAPN9-203ENST00000366666 SPATA21Q7Z572 469 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 ZNF513Q8N8E2 541 aaPredicted RBP12.26□□□□□ -0.45
CAPN9-203ENST00000366666 EID2BQ96D98 161 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 KLHL32Q96NJ5 620 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 ATP13A3Q9H7F0 1226 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 UGT1A7Q9HAW7 530 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 UGT1A10Q9HAW8 530 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 UGT1A8Q9HAW9 530 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 ARHGEF3Q9NR81 526 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 NOP53Q9NZM5 478 aaKnown RBP12.26□□□□□ -0.45
CAPN9-203ENST00000366666 PRKAG3Q9UGI9 489 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 SOX13Q9UN79 622 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 EPHX1P07099 455 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 PGAM1P18669 254 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 VASPP50552 380 aaPredicted RBP12.26□□□□□ -0.45
CAPN9-203ENST00000366666 ZP2Q05996 745 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 CNGA3Q16281 694 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 LRRK1Q38SD2 2015 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 KBTBD12Q3ZCT8 623 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 ANKRD20A4Q4UJ75 823 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 TMEM196Q5HYL7 178 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 RALGPS1Q5JS13 557 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 PCID2Q5JVF3 399 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 ARMC12Q5T9G4 340 aa12.26□□□□□ -0.45
CAPN9-203ENST00000366666 STEAP4Q687X5 459 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms