RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 SORDQ00796 357 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 ALG11Q2TAA5 492 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 KIF19Q2TAC6 998 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 COL28A1Q2UY09 1125 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 EIF2S3LQ2VIR3 472 aaKnown RBP3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 AMZ1Q400G9 498 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 PPP6R3Q5H9R7 873 aaPredicted RBP3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 INO80CQ6PI98 192 aaPredicted RBP3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 QSOX2Q6ZRP7 698 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 HAPLN4Q86UW8 402 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 ARMC8Q8IUR7 673 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 CNTROBQ8N137 903 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 TSPYL6Q8N831 410 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 WDR26Q9H7D7 661 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 BRF2Q9HAW0 419 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 PREBQ9HCU5 417 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 TINAGQ9UJW2 476 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 RCOR1Q9UKL0 485 aa3.24□□□□□ -1.89
RNU4-48P-201ENST00000365559 CNTNAP2Q9UHC6 1331 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 EME2A4GXA9 379 aaPredicted RBP3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 IFITM10A6NMD0 228 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 PRR23D1E9PI22 279 aaPredicted RBP3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 TGFB1I1O43294 461 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 PLRG1O43660 514 aaKnown RBP3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 GAGE7O76087 117 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 PMS2P2O95744 297 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 GAGE12FP0CL80 117 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 GAGE12GP0CL81 117 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 GAGE12IP0CL82 117 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 PRR23D2P0DMB1 279 aaPredicted RBP3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 DAOP14920 347 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 ICAM3P32942 547 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 CPOXP36551 454 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 GABRB2P47870 512 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 CTCFP49711 727 aaPredicted RBP3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 GAS1P54826 345 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 CASP6P55212 293 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 ERVFC1-1P60608 527 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 GAGE1Q13065 139 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 GAGE4Q13068 117 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 SNTA1Q13424 505 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 FGFBP1Q14512 234 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 OASLQ15646 514 aaKnown RBP3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 CALCRLQ16602 461 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 ALFQ53S48 1182 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 SLC45A4Q5BKX6 768 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 WDR73Q6P4I2 378 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 SPSB3Q6PJ21 355 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 MMS22LQ6ZRQ5 1243 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 MTBPQ96DY7 904 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 SAAL1Q96ER3 474 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 IGSF21Q96ID5 467 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 C3orf30Q96M34 536 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 OR1F2PQ96R84 312 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 SEC62Q99442 399 aaKnown RBP3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 SPRY4Q9C004 299 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 ZNF556Q9HAH1 456 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 GPR108Q9NPR9 543 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 CNGB3Q9NQW8 809 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 PLSCR4Q9NRQ2 329 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 INTS6Q9UL03 887 aaKnown RBP3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 MKLN1Q9UL63 735 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 CAPN7Q9Y6W3 813 aa3.23□□□□□ -1.89
RNU4-48P-201ENST00000365559 NOTCH4Q99466 2003 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 ATXN2Q99700 1313 aaKnown RBP3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 MAGEA13PA6NCF6 341 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 LRRC53A6NM62 1247 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 USP17L23D6RBM5 183 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 MID1O15344 667 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 SLC16A5O15375 505 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 FTCDO95954 541 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 SNRNP70P08621 437 aaKnown RBP3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 LINC00271P0C7V0 271 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 UBL4AP11441 157 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 MAOAP21397 527 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 CDAP32320 146 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 DDIT3P35638 169 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 ARL1P40616 181 aaPredicted RBP3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 METAP2P50579 478 aaKnown RBP eCLIP3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 RPL36AP83881 106 aaKnown RBP3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 ZNF155Q12901 538 aaPredicted RBP3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 G3BP1Q13283 466 aaKnown RBP eCLIP3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 NAE1Q13564 534 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 GSTA3Q16772 222 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 ATP13A5Q4VNC0 1218 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 HSP90AB4PQ58FF6 505 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 INTS11Q5TA45 600 aaKnown RBP3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 SLC36A4Q6YBV0 504 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 TAOK1Q7L7X3 1001 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 R3HCC1LQ7Z5L2 792 aaKnown RBP3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 DSELQ8IZU8 1212 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 SPATA6LQ8N4H0 392 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 SPATA22Q8NHS9 363 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 TANKQ92844 425 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 BICD1Q96G01 975 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 SLC41A2Q96JW4 573 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 DUX5Q96PT3 197 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 SLITRK1Q96PX8 696 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 PIP5K1AQ99755 562 aa3.22□□□□□ -1.89
RNU4-48P-201ENST00000365559 FAM110AQ9BQ89 295 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms