RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 HMGCLP35914 325 aa18.08■□□□□ 0.49
CCDC7-203ENST00000362006 HADHAP40939 763 aa18.08■□□□□ 0.49
CCDC7-203ENST00000362006 ZP2Q05996 745 aa18.08■□□□□ 0.49
CCDC7-203ENST00000362006 CAMK2GQ13555 558 aaPredicted RBP18.08■□□□□ 0.49
CCDC7-203ENST00000362006 UGP2Q16851 508 aa18.08■□□□□ 0.49
CCDC7-203ENST00000362006 LGSNQ5TDP6 509 aa18.08■□□□□ 0.49
CCDC7-203ENST00000362006 AGBL2Q5U5Z8 902 aa18.08■□□□□ 0.49
CCDC7-203ENST00000362006 FAM46CQ5VWP2 391 aa18.08■□□□□ 0.49
CCDC7-203ENST00000362006 ADGRD1Q6QNK2 874 aa18.08■□□□□ 0.49
CCDC7-203ENST00000362006 MARK2Q7KZI7 788 aaKnown RBP18.08■□□□□ 0.49
CCDC7-203ENST00000362006 RASSF3Q86WH2 238 aa18.08■□□□□ 0.49
CCDC7-203ENST00000362006 TTC30BQ8N4P2 665 aa18.08■□□□□ 0.49
CCDC7-203ENST00000362006 PPM1NQ8N819 430 aa18.08■□□□□ 0.49
CCDC7-203ENST00000362006 ZNF180Q9UJW8 692 aa18.08■□□□□ 0.49
CCDC7-203ENST00000362006 SORCS3Q9UPU3 1222 aa18.08■□□□□ 0.49
CCDC7-203ENST00000362006 TCF20Q9UGU0 1960 aaKnown RBP18.08■□□□□ 0.49
CCDC7-203ENST00000362006 STX7O15400 261 aaKnown RBP18.08■□□□□ 0.48
CCDC7-203ENST00000362006 SYNCRIPO60506 623 aaKnown RBP18.08■□□□□ 0.48
CCDC7-203ENST00000362006 RNASEH1O60930 286 aaKnown RBP18.08■□□□□ 0.48
CCDC7-203ENST00000362006 RPP40O75818 363 aaKnown RBP18.08■□□□□ 0.48
CCDC7-203ENST00000362006 VAPBO95292 243 aa18.08■□□□□ 0.48
CCDC7-203ENST00000362006 SYF2O95926 243 aaKnown RBP18.08■□□□□ 0.48
CCDC7-203ENST00000362006 PRKCGP05129 697 aa18.08■□□□□ 0.48
CCDC7-203ENST00000362006 CTPS1P17812 591 aa18.08■□□□□ 0.48
CCDC7-203ENST00000362006 XPAP23025 273 aaPredicted RBP18.08■□□□□ 0.48
CCDC7-203ENST00000362006 ITGB7P26010 798 aa18.08■□□□□ 0.48
CCDC7-203ENST00000362006 ARCN1P48444 511 aaKnown RBP18.08■□□□□ 0.48
CCDC7-203ENST00000362006 ZNF140P52738 457 aaPredicted RBP18.08■□□□□ 0.48
CCDC7-203ENST00000362006 SEC13P55735 322 aa18.08■□□□□ 0.48
CCDC7-203ENST00000362006 THOC5Q13769 683 aaKnown RBP18.08■□□□□ 0.48
CCDC7-203ENST00000362006 ZSWIM9Q86XI8 627 aa18.08■□□□□ 0.48
CCDC7-203ENST00000362006 OR13J1Q8NGT2 312 aa18.08■□□□□ 0.48
CCDC7-203ENST00000362006 PIP4K2CQ8TBX8 421 aa18.08■□□□□ 0.48
CCDC7-203ENST00000362006 GABRG3Q99928 467 aa18.08■□□□□ 0.48
CCDC7-203ENST00000362006 FAM167BQ9BTA0 163 aa18.08■□□□□ 0.48
CCDC7-203ENST00000362006 ZFYVE1Q9HBF4 777 aa18.08■□□□□ 0.48
CCDC7-203ENST00000362006 PRDM6Q9NQX0 595 aa18.08■□□□□ 0.48
CCDC7-203ENST00000362006 SLC2A6Q9UGQ3 507 aa18.08■□□□□ 0.48
CCDC7-203ENST00000362006 PKP3Q9Y446 797 aa18.08■□□□□ 0.48
CCDC7-203ENST00000362006 SMIM23A6NLE4 172 aa18.07■□□□□ 0.48
CCDC7-203ENST00000362006 UPK3BL1B0FP48 263 aa18.07■□□□□ 0.48
CCDC7-203ENST00000362006 UPK3BL2E5RIL1 263 aa18.07■□□□□ 0.48
CCDC7-203ENST00000362006 ERVK-10P10266 1014 aa18.07■□□□□ 0.48
CCDC7-203ENST00000362006 GCAP28676 217 aa18.07■□□□□ 0.48
CCDC7-203ENST00000362006 SLCO1A2P46721 670 aa18.07■□□□□ 0.48
CCDC7-203ENST00000362006 SERPINB9P50453 376 aa18.07■□□□□ 0.48
CCDC7-203ENST00000362006 PRAMEP78395 509 aa18.07■□□□□ 0.48
CCDC7-203ENST00000362006 PRKCQQ04759 706 aa18.07■□□□□ 0.48
CCDC7-203ENST00000362006 STARD3Q14849 445 aa18.07■□□□□ 0.48
CCDC7-203ENST00000362006 MLF2Q15773 248 aaPredicted RBP18.07■□□□□ 0.48
CCDC7-203ENST00000362006 CENPHQ9H3R5 247 aa18.07■□□□□ 0.48
CCDC7-203ENST00000362006 FAM53CQ9NYF3 392 aa18.07■□□□□ 0.48
CCDC7-203ENST00000362006 TXNDC16Q9P2K2 825 aa18.07■□□□□ 0.48
CCDC7-203ENST00000362006 CKAP5Q14008 2032 aa18.07■□□□□ 0.48
CCDC7-203ENST00000362006 CCDC78A2IDD5 438 aa18.07■□□□□ 0.48
CCDC7-203ENST00000362006 C16orf96A6NNT2 1141 aa18.07■□□□□ 0.48
CCDC7-203ENST00000362006 HMGB1P1B2RPK0 211 aaPredicted RBP18.07■□□□□ 0.48
CCDC7-203ENST00000362006 KPNA3O00505 521 aaPredicted RBP18.07■□□□□ 0.48
CCDC7-203ENST00000362006 ALPIP09923 528 aa18.07■□□□□ 0.48
CCDC7-203ENST00000362006 ILF2Q12905 390 aaKnown RBP18.07■□□□□ 0.48
CCDC7-203ENST00000362006 HSP90AA5PQ58FG0 334 aa18.07■□□□□ 0.48
CCDC7-203ENST00000362006 TEDDM1Q5T9Z0 273 aa18.07■□□□□ 0.48
CCDC7-203ENST00000362006 UNC5BQ8IZJ1 945 aa18.07■□□□□ 0.48
CCDC7-203ENST00000362006 MFSD1Q9H3U5 465 aa18.07■□□□□ 0.48
CCDC7-203ENST00000362006 DYRK4Q9NR20 520 aa18.07■□□□□ 0.48
CCDC7-203ENST00000362006 SMYD2Q9NRG4 433 aa18.07■□□□□ 0.48
CCDC7-203ENST00000362006 KCTD3Q9Y597 815 aa18.07■□□□□ 0.48
CCDC7-203ENST00000362006 C1orf232A0A0U1RR37 186 aa18.06■□□□□ 0.48
CCDC7-203ENST00000362006 CXorf49A8MYA2 514 aaPredicted RBP18.06■□□□□ 0.48
CCDC7-203ENST00000362006 CHRM1P11229 460 aaPredicted RBP18.06■□□□□ 0.48
CCDC7-203ENST00000362006 TIMP2P16035 220 aa18.06■□□□□ 0.48
CCDC7-203ENST00000362006 ZNF30P17039 623 aa18.06■□□□□ 0.48
CCDC7-203ENST00000362006 CNTFP26441 200 aa18.06■□□□□ 0.48
CCDC7-203ENST00000362006 PTPN5P54829 565 aa18.06■□□□□ 0.48
CCDC7-203ENST00000362006 EFTUD2Q15029 972 aaKnown RBP eCLIP18.06■□□□□ 0.48
CCDC7-203ENST00000362006 CDKN3Q16667 212 aa18.06■□□□□ 0.48
CCDC7-203ENST00000362006 ZNF852Q6ZMS4 543 aa18.06■□□□□ 0.48
CCDC7-203ENST00000362006 TAOK1Q7L7X3 1001 aa18.06■□□□□ 0.48
CCDC7-203ENST00000362006 TTC7BQ86TV6 843 aa18.06■□□□□ 0.48
CCDC7-203ENST00000362006 CNTN4Q8IWV2 1026 aa18.06■□□□□ 0.48
CCDC7-203ENST00000362006 OR4K2Q8NGD2 314 aa18.06■□□□□ 0.48
CCDC7-203ENST00000362006 DCAKDQ8WVC6 231 aa18.06■□□□□ 0.48
CCDC7-203ENST00000362006 HDAC10Q969S8 669 aa18.06■□□□□ 0.48
CCDC7-203ENST00000362006 CDKN2AIPNLQ96HQ2 116 aa18.06■□□□□ 0.48
CCDC7-203ENST00000362006 SGSM3Q96HU1 749 aa18.06■□□□□ 0.48
CCDC7-203ENST00000362006 DNAJC1Q96KC8 554 aaKnown RBP18.06■□□□□ 0.48
CCDC7-203ENST00000362006 ATP6V1G3Q96LB4 118 aa18.06■□□□□ 0.48
CCDC7-203ENST00000362006 CPNE1Q99829 537 aa18.06■□□□□ 0.48
CCDC7-203ENST00000362006 RSPH9Q9H1X1 276 aaPredicted RBP18.06■□□□□ 0.48
CCDC7-203ENST00000362006 EURLQ9NYK6 297 aa18.06■□□□□ 0.48
CCDC7-203ENST00000362006 IL17CQ9P0M4 197 aa18.06■□□□□ 0.48
CCDC7-203ENST00000362006 IQANK1A0A1B0GTG1 560 aa18.05■□□□□ 0.48
CCDC7-203ENST00000362006 C19orf67A6NJJ6 358 aa18.05■□□□□ 0.48
CCDC7-203ENST00000362006 AURKAO14965 403 aa18.05■□□□□ 0.48
CCDC7-203ENST00000362006 IL1BP01584 269 aa18.05■□□□□ 0.48
CCDC7-203ENST00000362006 CCDC15Q0P6D6 951 aa18.05■□□□□ 0.48
CCDC7-203ENST00000362006 C2orf27AQ580R0 203 aa18.05■□□□□ 0.48
CCDC7-203ENST00000362006 NEPROQ6NW34 567 aa18.05■□□□□ 0.48
CCDC7-203ENST00000362006 ERAP2Q6P179 960 aa18.05■□□□□ 0.48
CCDC7-203ENST00000362006 LYSMD3Q7Z3D4 306 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms