RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 IFIH1Q9BYX4 1025 aaKnown RBP5.05□□□□□ -1.6
RPL39-201ENST00000361575 HRH4Q9H3N8 390 aa5.05□□□□□ -1.6
RPL39-201ENST00000361575 KLHL31Q9H511 634 aa5.05□□□□□ -1.6
RPL39-201ENST00000361575 MYRFQ9Y2G1 1151 aa5.05□□□□□ -1.6
RPL39-201ENST00000361575 CMAHPQ9Y471 501 aa5.05□□□□□ -1.6
RPL39-201ENST00000361575 NFE2L3Q9Y4A8 694 aa5.05□□□□□ -1.6
RPL39-201ENST00000361575 INSL6Q9Y581 213 aa5.05□□□□□ -1.6
RPL39-201ENST00000361575 TRPV2Q9Y5S1 764 aa5.05□□□□□ -1.6
RPL39-201ENST00000361575 TTBK1Q5TCY1 1321 aaPredicted RBP5.04□□□□□ -1.6
RPL39-201ENST00000361575 ZNF335Q9H4Z2 1342 aaPredicted RBP5.04□□□□□ -1.6
RPL39-201ENST00000361575 A0A1B0GVM2 712 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 CHL1O00533 1208 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 TLX3O43711 291 aaPredicted RBP5.04□□□□□ -1.6
RPL39-201ENST00000361575 KIF1CO43896 1103 aaKnown RBP5.04□□□□□ -1.6
RPL39-201ENST00000361575 RGS11O94810 467 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 C22orf31O95567 290 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 CHRNB1P11230 501 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 MMP9P14780 707 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 RAD23AP54725 363 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 TAS2R40P59535 323 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 SORDQ00796 357 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 NAE1Q13564 534 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 KRT24Q2M2I5 525 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 PLEKHA7Q6IQ23 1121 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 FAM47EQ6ZV65 393 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 MTSS1LQ765P7 747 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 LINGO2Q7L985 606 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 WDR63Q8IWG1 891 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 FAM217AQ8IXS0 508 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 RNF168Q8IYW5 571 aaPredicted RBP5.04□□□□□ -1.6
RPL39-201ENST00000361575 FAM185AQ8N0U4 392 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 SYT2Q8N9I0 419 aaPredicted RBP5.04□□□□□ -1.6
RPL39-201ENST00000361575 AVL9Q8NBF6 648 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 POGLUT1Q8NBL1 392 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 BEST2Q8NFU1 509 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 ERGIC1Q969X5 290 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 RRNAD1Q96FB5 475 aaKnown RBP5.04□□□□□ -1.6
RPL39-201ENST00000361575 DGAT2Q96PD7 388 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 SIGLEC11Q96RL6 698 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 AGAP2Q99490 1192 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 NCAPGQ9BPX3 1015 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 KCNN2Q9H2S1 579 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 R3HDMLQ9H3Y0 253 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 ST6GALNAC4Q9H4F1 302 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 ESRP2Q9H6T0 727 aaKnown RBP5.04□□□□□ -1.6
RPL39-201ENST00000361575 SLC28A3Q9HAS3 691 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 TMEM184CQ9NVA4 438 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 TAB2Q9NYJ8 693 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 MSRB1Q9NZV6 116 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 CPSF2Q9P2I0 782 aaKnown RBP5.04□□□□□ -1.6
RPL39-201ENST00000361575 ING1Q9UK53 422 aaPredicted RBP5.04□□□□□ -1.6
RPL39-201ENST00000361575 PLAGL1Q9UM63 463 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 RAI2Q9Y5P3 530 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 DMRT1Q9Y5R6 373 aa5.04□□□□□ -1.6
RPL39-201ENST00000361575 hCG_1809904A0A1W2PP81 198 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 A0A1W2PPE2 198 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 A0A1W2PR64 198 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 ZNF814B7Z6K7 855 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 PLRG1O43660 514 aaKnown RBP5.03□□□□□ -1.6
RPL39-201ENST00000361575 BCAR3O75815 825 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 ANXA7P20073 488 aaKnown RBP5.03□□□□□ -1.6
RPL39-201ENST00000361575 HOXD9P28356 352 aaPredicted RBP5.03□□□□□ -1.6
RPL39-201ENST00000361575 COPB2P35606 906 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 STAT2P52630 851 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 ARHGEF6Q15052 776 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 NAB2Q15742 525 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 ZNF628Q5EBL2 1059 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 C6orf10Q5SRN2 563 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 PQLC2Q6ZP29 291 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 MMP21Q8N119 569 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 MINDY1Q8N5J2 469 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 BOLLQ8N9W6 283 aaKnown RBP5.03□□□□□ -1.6
RPL39-201ENST00000361575 HASPINQ8TF76 798 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 ZNF622Q969S3 477 aaKnown RBP eCLIP5.03□□□□□ -1.6
RPL39-201ENST00000361575 TMEM18Q96B42 140 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 CCDC34Q96HJ3 373 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 EGLN2Q96KS0 407 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 CEP295NLQ96MC4 621 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 TTC14Q96N46 770 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 WDR77Q9BQA1 342 aaPredicted RBP5.03□□□□□ -1.6
RPL39-201ENST00000361575 TUBB6Q9BUF5 446 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 KRTAP9-2Q9BYQ4 174 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 RABEP2Q9H5N1 569 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 MKKSQ9NPJ1 570 aaPredicted RBP5.03□□□□□ -1.6
RPL39-201ENST00000361575 SLC35C2Q9NQQ7 365 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 CYSLTR2Q9NS75 346 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 MTMR10Q9NXD2 777 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 CISD1Q9NZ45 108 aaKnown RBP5.03□□□□□ -1.6
RPL39-201ENST00000361575 ANAPC2Q9UJX6 822 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 R3HDM2Q9Y2K5 976 aaKnown RBP5.03□□□□□ -1.6
RPL39-201ENST00000361575 CLIC4Q9Y696 253 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 SLC4A4Q9Y6R1 1079 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 MAU2Q9Y6X3 613 aa5.03□□□□□ -1.6
RPL39-201ENST00000361575 SMIM35A0A1B0GVV1 85 aa5.02□□□□□ -1.61
RPL39-201ENST00000361575 LNP1A1A4G5 178 aa5.02□□□□□ -1.61
RPL39-201ENST00000361575 URADA6NGE7 173 aa5.02□□□□□ -1.61
RPL39-201ENST00000361575 STMND1H3BQB6 276 aa5.02□□□□□ -1.61
RPL39-201ENST00000361575 VCYO14598 125 aa5.02□□□□□ -1.61
RPL39-201ENST00000361575 ATP2A1O14983 1001 aa5.02□□□□□ -1.61
RPL39-201ENST00000361575 PRPF4O43172 522 aaKnown RBP eCLIP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms