RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 FAM220AQ7Z4H9 259 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 KREMEN2Q8NCW0 462 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 PIGKQ92643 395 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 VAT1Q99536 393 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 ATAD3AQ9NVI7 634 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 PCDHGC4Q9Y5F7 938 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 LOC100506127A0A0U1RQW1 187 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 C9orf64Q5T6V5 341 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 ZNF248Q8NDW4 579 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 PDZD7Q9H5P4 517 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 STMN3Q9NZ72 180 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 C2CD2Q9Y426 696 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 ZNF536O15090 1300 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 KPNA5O15131 536 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 SLC20A2Q08357 652 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 ETNPPLQ8TBG4 499 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 NELL1Q92832 810 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 PDLIM2Q96JY6 352 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 KLHL32Q96NJ5 620 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 MECRQ9BV79 373 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 EPB41L4BQ9H329 900 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 PROCP04070 461 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 ADRA1DP25100 572 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 NFATC2Q13469 925 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 FAM187BQ17R55 369 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 NAPRTQ6XQN6 538 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 HMCESQ96FZ2 354 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 HSFY1Q96LI6 401 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 COPS8Q99627 209 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 PNMA8CA0A1B0GUJ8 204 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 SPATA31C1P0DKV0 1188 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 DSC2Q02487 901 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 RSBN1Q5VWQ0 802 aaPredicted RBP20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 FCHO1O14526 889 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 CDK14O94921 469 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 CYP4B1P13584 511 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 NKAPQ8N5F7 415 aaKnown RBP20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 LRRN4CLQ8ND94 238 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 GTF2IRD1Q9UHL9 959 aa20.32■□□□□ 0.84
CDC42BPB-201ENST00000361246 CBX6O95503 412 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 LMO2P25791 158 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 NRIP1P48552 1158 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 ARMCX4Q5H9R4 360 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 NT5DC1Q5TFE4 455 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 GDPD5Q8WTR4 605 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 COQ7Q99807 217 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 ZNF304Q9HCX3 659 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 MTF2Q9Y483 593 aaPredicted RBP20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 TNPO3Q9Y5L0 923 aaKnown RBP20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 LIASO43766 372 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 PPP1R11O60927 126 aaPredicted RBP20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 ZBTB48P10074 688 aaPredicted RBP20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 SCTRP47872 440 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 CDH13P55290 713 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 RHAGQ02094 409 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 ACAP1Q15027 740 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 ZNF280BQ86YH2 543 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 PYROXD2Q8N2H3 581 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 ATL1Q8WXF7 558 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 PCED1BQ96HM7 432 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 KCTD15Q96SI1 283 aaPredicted RBP20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 MRPS7Q9Y2R9 242 aaKnown RBP20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 ULK1O75385 1050 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 TACR2P21452 398 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 FMO1Q01740 532 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 TLE2Q04725 743 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 CDK18Q07002 472 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 UBAP2LQ14157 1087 aaKnown RBP20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 OR6Y1Q8NGX8 325 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 UBE2E3Q969T4 207 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 SMG9Q9H0W8 520 aaKnown RBP20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 UTS2BQ765I0 119 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 CADM2Q8N3J6 435 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 ZFP28Q8NHY6 868 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 BDH2Q9BUT1 245 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 IRS2Q9Y4H2 1338 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 ARHGAP23Q9P227 1491 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 TMEM131LA2VDJ0 1609 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 SOWAHBA6NEL2 793 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 SLC38A8A6NNN8 435 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 RAD23AP54725 363 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 RAB10P61026 200 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 MYCBPAPQ8TBZ2 947 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 C5orf34Q96MH7 638 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 UGT2B28Q9BY64 529 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 TRIM8Q9BZR9 551 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 DNAJC28Q9NX36 388 aa20.31■□□□□ 0.84
CDC42BPB-201ENST00000361246 CARNS1A5YM72 827 aa20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 H3BM21 787 aa20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 EFNA1P20827 205 aaPredicted RBP20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 RNASE12Q5GAN4 147 aaKnown RBP20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 PAPD7Q5XG87 772 aaKnown RBP20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 WDR93Q6P2C0 686 aa20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 TSHZ1Q6ZSZ6 1077 aa20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 GPRIN3Q6ZVF9 776 aa20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 VPS35Q96QK1 796 aa20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 ADAM30Q9UKF2 790 aa20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 IDH3BO43837 385 aa20.3■□□□□ 0.84
CDC42BPB-201ENST00000361246 CCNE2O96020 404 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms