RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 PHF21BQ96EK2 531 aa26.43■■□□□ 1.82
CUEDC1-201ENST00000360238 MYEOVQ96EZ4 313 aa26.43■■□□□ 1.82
CUEDC1-201ENST00000360238 RETREG1Q9H6L5 497 aa26.43■■□□□ 1.82
CUEDC1-201ENST00000360238 TRPC7Q9HCX4 862 aa26.43■■□□□ 1.82
CUEDC1-201ENST00000360238 SPATS2LQ9NUQ6 558 aaKnown RBP26.43■■□□□ 1.82
CUEDC1-201ENST00000360238 FIS1Q9Y3D6 152 aa26.43■■□□□ 1.82
CUEDC1-201ENST00000360238 GBF1Q92538 1859 aa26.42■■□□□ 1.82
CUEDC1-201ENST00000360238 CD3EAPO15446 510 aaKnown RBP26.42■■□□□ 1.82
CUEDC1-201ENST00000360238 TLR5O60602 858 aa26.42■■□□□ 1.82
CUEDC1-201ENST00000360238 GOT2P00505 430 aaKnown RBP26.42■■□□□ 1.82
CUEDC1-201ENST00000360238 OGNP20774 298 aaKnown RBP26.42■■□□□ 1.82
CUEDC1-201ENST00000360238 SUOXP51687 545 aa26.42■■□□□ 1.82
CUEDC1-201ENST00000360238 C1QTNF8P60827 252 aa26.42■■□□□ 1.82
CUEDC1-201ENST00000360238 LRRC36Q1X8D7 754 aa26.42■■□□□ 1.82
CUEDC1-201ENST00000360238 BLOC1S5Q8TDH9 187 aa26.42■■□□□ 1.82
CUEDC1-201ENST00000360238 C2orf15Q8WU43 125 aaKnown RBP26.42■■□□□ 1.82
CUEDC1-201ENST00000360238 DNAJC1Q96KC8 554 aaKnown RBP26.42■■□□□ 1.82
CUEDC1-201ENST00000360238 CCSER2Q9H7U1 834 aa26.42■■□□□ 1.82
CUEDC1-201ENST00000360238 TNFRSF12AQ9NP84 129 aa26.42■■□□□ 1.82
CUEDC1-201ENST00000360238 PACSIN3Q9UKS6 424 aa26.42■■□□□ 1.82
CUEDC1-201ENST00000360238 CEP350Q5VT06 3117 aa26.42■■□□□ 1.82
CUEDC1-201ENST00000360238 UQCRBP14927 111 aa26.41■■□□□ 1.82
CUEDC1-201ENST00000360238 DPP6P42658 865 aa26.41■■□□□ 1.82
CUEDC1-201ENST00000360238 ZNF678Q5SXM1 525 aa26.41■■□□□ 1.82
CUEDC1-201ENST00000360238 RNF19BQ6ZMZ0 732 aa26.41■■□□□ 1.82
CUEDC1-201ENST00000360238 PIM3Q86V86 326 aa26.41■■□□□ 1.82
CUEDC1-201ENST00000360238 PNPLA1Q8N8W4 532 aa26.41■■□□□ 1.82
CUEDC1-201ENST00000360238 SLC43A3Q8NBI5 491 aa26.41■■□□□ 1.82
CUEDC1-201ENST00000360238 MRPL1Q9BYD6 325 aaKnown RBP26.41■■□□□ 1.82
CUEDC1-201ENST00000360238 ARL5AQ9Y689 179 aa26.41■■□□□ 1.82
CUEDC1-201ENST00000360238 UBDO15205 165 aa26.41■■□□□ 1.82
CUEDC1-201ENST00000360238 CFLARO15519 480 aa26.41■■□□□ 1.82
CUEDC1-201ENST00000360238 TBC1D4O60343 1298 aa26.41■■□□□ 1.82
CUEDC1-201ENST00000360238 GJB3O75712 270 aa26.41■■□□□ 1.82
CUEDC1-201ENST00000360238 SERPINF2P08697 491 aa26.41■■□□□ 1.82
CUEDC1-201ENST00000360238 UBTFL6P0CB48 400 aaPredicted RBP26.41■■□□□ 1.82
CUEDC1-201ENST00000360238 AQP4P55087 323 aa26.41■■□□□ 1.82
CUEDC1-201ENST00000360238 STX5Q13190 355 aa26.41■■□□□ 1.82
CUEDC1-201ENST00000360238 BBS5Q8N3I7 341 aa26.41■■□□□ 1.82
CUEDC1-201ENST00000360238 CDK5RAP1Q96SZ6 601 aaKnown RBP26.41■■□□□ 1.82
CUEDC1-201ENST00000360238 TSEN34Q9BSV6 310 aaKnown RBP26.41■■□□□ 1.82
CUEDC1-201ENST00000360238 CRYL1Q9Y2S2 319 aa26.41■■□□□ 1.82
CUEDC1-201ENST00000360238 ASB3Q9Y575 518 aa26.41■■□□□ 1.82
CUEDC1-201ENST00000360238 SMIM24O75264 130 aa26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 CD1DP15813 335 aa26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 PKNOX1P55347 436 aa26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 FUT10Q6P4F1 479 aa26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 ZNF549Q6P9A3 640 aa26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 GK5Q6ZS86 529 aa26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 LGI2Q8N0V4 545 aa26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 BTBD9Q96Q07 612 aa26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 NPAS2Q99743 824 aa26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 MAGEH1Q9H213 219 aa26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 TRAF6Q9Y4K3 522 aa26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 CCDC162PA2VCL2 907 aa26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 H7C4K7 107 aa26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 BCAS2O75934 225 aaPredicted RBP26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 UPP2O95045 317 aa26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 PSMD8P48556 350 aa26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 HERVK_113P63132 956 aa26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 ELAVL2Q12926 359 aaKnown RBP26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 PTK2BQ14289 1009 aa26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 GALNT3Q14435 633 aa26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 RSPO2Q6UXX9 243 aaPredicted RBP26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 LRRC8DQ7L1W4 858 aa26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 SPNS2Q8IVW8 549 aa26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 PTERQ96BW5 349 aa26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 CASD1Q96PB1 797 aa26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 MGME1Q9BQP7 344 aa26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 ERVK-6Q9BXR3 956 aa26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 CATSPERZQ9NTU4 200 aa26.4■■□□□ 1.82
CUEDC1-201ENST00000360238 NDST3O95803 873 aa26.39■■□□□ 1.82
CUEDC1-201ENST00000360238 ALDH2P05091 517 aa26.39■■□□□ 1.82
CUEDC1-201ENST00000360238 HOXD9P28356 352 aaPredicted RBP26.39■■□□□ 1.82
CUEDC1-201ENST00000360238 MED21Q13503 144 aa26.39■■□□□ 1.82
CUEDC1-201ENST00000360238 RPS27LQ71UM5 84 aaKnown RBP26.39■■□□□ 1.82
CUEDC1-201ENST00000360238 HMGCLL1Q8TB92 370 aa26.39■■□□□ 1.82
CUEDC1-201ENST00000360238 USP13Q92995 863 aaPredicted RBP26.39■■□□□ 1.82
CUEDC1-201ENST00000360238 ASB2Q96Q27 587 aa26.39■■□□□ 1.82
CUEDC1-201ENST00000360238 TRIB3Q96RU7 358 aa26.39■■□□□ 1.82
CUEDC1-201ENST00000360238 TTLL2Q9BWV7 592 aa26.39■■□□□ 1.82
CUEDC1-201ENST00000360238 MRPL40Q9NQ50 206 aaKnown RBP26.39■■□□□ 1.82
CUEDC1-201ENST00000360238 PCDHB7Q9Y5E2 793 aa26.39■■□□□ 1.82
CUEDC1-201ENST00000360238 ALDH1A3P47895 512 aa26.39■■□□□ 1.81
CUEDC1-201ENST00000360238 KCNC1P48547 511 aa26.39■■□□□ 1.81
CUEDC1-201ENST00000360238 SLC11A1P49279 550 aa26.39■■□□□ 1.81
CUEDC1-201ENST00000360238 FASTKQ14296 549 aaKnown RBP26.39■■□□□ 1.81
CUEDC1-201ENST00000360238 TYSND1Q2T9J0 566 aa26.39■■□□□ 1.81
CUEDC1-201ENST00000360238 OR4L1Q8NH43 312 aa26.39■■□□□ 1.81
CUEDC1-201ENST00000360238 TMA16Q96EY4 203 aaKnown RBP26.39■■□□□ 1.81
CUEDC1-201ENST00000360238 POLR3BQ9NW08 1133 aaPredicted RBP26.39■■□□□ 1.81
CUEDC1-201ENST00000360238 ABT1Q9ULW3 272 aaKnown RBP26.39■■□□□ 1.81
CUEDC1-201ENST00000360238 A0A1W2PQ45 241 aaPredicted RBP26.38■■□□□ 1.81
CUEDC1-201ENST00000360238 A0A1W2PQY0 241 aa26.38■■□□□ 1.81
CUEDC1-201ENST00000360238 PSMD12O00232 456 aaPredicted RBP26.38■■□□□ 1.81
CUEDC1-201ENST00000360238 TRIM38O00635 465 aa26.38■■□□□ 1.81
CUEDC1-201ENST00000360238 UBFD1O14562 309 aaKnown RBP26.38■■□□□ 1.81
CUEDC1-201ENST00000360238 RNASEH1O60930 286 aaKnown RBP26.38■■□□□ 1.81
CUEDC1-201ENST00000360238 SUPT7LO94864 414 aa26.38■■□□□ 1.81
CUEDC1-201ENST00000360238 SLC4A1P02730 911 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms