RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 GRK2P25098 689 aa13.33□□□□□ -0.27
NFIX-201ENST00000358552 ARNTP27540 789 aa13.33□□□□□ -0.27
NFIX-201ENST00000358552 NRIP1P48552 1158 aa13.33□□□□□ -0.27
NFIX-201ENST00000358552 POLR2LP62875 67 aaKnown RBP13.33□□□□□ -0.27
NFIX-201ENST00000358552 PDE1CQ14123 709 aaPredicted RBP13.33□□□□□ -0.27
NFIX-201ENST00000358552 USP10Q14694 798 aaKnown RBP13.33□□□□□ -0.27
NFIX-201ENST00000358552 SPRED3Q2MJR0 410 aa13.33□□□□□ -0.27
NFIX-201ENST00000358552 ZDHHC20Q5W0Z9 365 aa13.33□□□□□ -0.27
NFIX-201ENST00000358552 ZNF470Q6ECI4 717 aa13.33□□□□□ -0.27
NFIX-201ENST00000358552 GLT6D1Q7Z4J2 308 aa13.33□□□□□ -0.27
NFIX-201ENST00000358552 CILP2Q8IUL8 1156 aa13.33□□□□□ -0.27
NFIX-201ENST00000358552 APCDD1Q8J025 514 aa13.33□□□□□ -0.27
NFIX-201ENST00000358552 OR4L1Q8NH43 312 aa13.33□□□□□ -0.27
NFIX-201ENST00000358552 LRIG1Q96JA1 1093 aa13.33□□□□□ -0.27
NFIX-201ENST00000358552 KLF6Q99612 283 aaPredicted RBP13.33□□□□□ -0.27
NFIX-201ENST00000358552 SIKE1Q9BRV8 207 aa13.33□□□□□ -0.27
NFIX-201ENST00000358552 CD248Q9HCU0 757 aa13.33□□□□□ -0.27
NFIX-201ENST00000358552 BATF3Q9NR55 127 aa13.33□□□□□ -0.27
NFIX-201ENST00000358552 FBXO10Q9UK96 956 aa13.33□□□□□ -0.27
NFIX-201ENST00000358552 PHTF1Q9UMS5 762 aa13.33□□□□□ -0.27
NFIX-201ENST00000358552 CCL26Q9Y258 94 aa13.33□□□□□ -0.27
NFIX-201ENST00000358552 ACOT9Q9Y305 439 aa13.33□□□□□ -0.27
NFIX-201ENST00000358552 A0A096LPK6 155 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 CCDC189A1A4V9 331 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 NEDD8-MDP1E9PL57 170 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 HOXC11O43248 304 aaPredicted RBP13.33□□□□□ -0.28
NFIX-201ENST00000358552 PGLSO95336 258 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 PRLP01236 227 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 LMNAP02545 664 aaKnown RBP13.33□□□□□ -0.28
NFIX-201ENST00000358552 SRPRAP08240 638 aaKnown RBP13.33□□□□□ -0.28
NFIX-201ENST00000358552 POLR2EP19388 210 aaKnown RBP13.33□□□□□ -0.28
NFIX-201ENST00000358552 FSHRP23945 695 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 HLA-FP30511 346 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 CD70P32970 193 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 RECQLP46063 649 aaPredicted RBP13.33□□□□□ -0.28
NFIX-201ENST00000358552 RAB10P61026 200 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 ECT2LQ008S8 904 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 ASPHQ12797 758 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 PDGFRLQ15198 375 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 ASRGL1Q7L266 308 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 GPR149Q86SP6 731 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 TMEM25Q86YD3 366 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 NUDCD3Q8IVD9 361 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 KDM1BQ8NB78 822 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 TTC16Q8NEE8 873 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 BPIFB1Q8TDL5 484 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 HCAR2Q8TDS4 363 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 SMARCD2Q92925 531 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 HDAC10Q969S8 669 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.33□□□□□ -0.281e-6■■■□□ 17.7
NFIX-201ENST00000358552 CDKN2AIPNLQ96HQ2 116 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 FAM96AQ9H5X1 160 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 ZNF576Q9H609 170 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 POPDC3Q9HBV1 291 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 DUS2Q9NX74 493 aaKnown RBP13.33□□□□□ -0.28
NFIX-201ENST00000358552 LMCD1Q9NZU5 365 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 MCM8Q9UJA3 840 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 SLC27A6Q9Y2P4 619 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 PKP3Q9Y446 797 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 COMMD10Q9Y6G5 202 aa13.33□□□□□ -0.28
NFIX-201ENST00000358552 STX7O15400 261 aaKnown RBP13.32□□□□□ -0.28
NFIX-201ENST00000358552 CD3EAPO15446 510 aaKnown RBP13.32□□□□□ -0.28
NFIX-201ENST00000358552 C2P06681 752 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 CEBPBP17676 345 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 PMLP29590 882 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 HMGCLP35914 325 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 SLC1A2P43004 574 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 RGRP47804 291 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 PPARDQ03181 441 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 GALNT3Q14435 633 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 IHHQ14623 411 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 ZKSCAN8Q15776 578 aaPredicted RBP13.32□□□□□ -0.28
NFIX-201ENST00000358552 FASTKD1Q53R41 847 aaKnown RBP13.32□□□□□ -0.28
NFIX-201ENST00000358552 LY6G5CQ5SRR4 150 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 FAM45BPQ6NSW5 357 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 LINGO4Q6UY18 593 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 CERS6Q6ZMG9 384 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 RAPH1Q70E73 1250 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 STK40Q8N2I9 435 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 FITM2Q8N6M3 262 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 LPCAT1Q8NF37 534 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 TTC8Q8TAM2 541 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 FAM45AQ8TCE6 357 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 WFDC5Q8TCV5 224 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 MYO19Q96H55 970 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 LYSMD1Q96S90 227 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 SMG9Q9H0W8 520 aaKnown RBP13.32□□□□□ -0.28
NFIX-201ENST00000358552 LRMDAQ9H2I8 198 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 NSUN3Q9H649 340 aaKnown RBP13.32□□□□□ -0.28
NFIX-201ENST00000358552 EBF2Q9HAK2 575 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 MLXIPLQ9NP71 852 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 CATSPERZQ9NTU4 200 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 SIRPGQ9P1W8 387 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 SLC17A7Q9P2U7 560 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 SLC39A10Q9ULF5 831 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 MTO1Q9Y2Z2 717 aaKnown RBP13.32□□□□□ -0.28
NFIX-201ENST00000358552 FCF1Q9Y324 198 aaKnown RBP13.32□□□□□ -0.28
NFIX-201ENST00000358552 PCDHGC4Q9Y5F7 938 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 C2orf16Q68DN1 1984 aa13.32□□□□□ -0.28
NFIX-201ENST00000358552 FAM95CA0A1B0GW59 222 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms