RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 RAB10P61026 200 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 ECT2LQ008S8 904 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 IRF8Q02556 426 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 ACAP2Q15057 778 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 HECTD3Q5T447 861 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 KCNT2Q6UVM3 1135 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 FAM83AQ86UY5 434 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 HPS6Q86YV9 775 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 SVOPLQ8N434 492 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 AIFM2Q9BRQ8 373 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 UNKQ9C0B0 810 aaKnown RBP12.88□□□□□ -0.35
SMC4-202ENST00000357388 ALG9Q9H6U8 611 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 BCKDKO14874 412 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 ULK1O75385 1050 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 GATBO75879 557 aaKnown RBP12.88□□□□□ -0.35
SMC4-202ENST00000357388 POMCP01189 267 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 FTH1P02794 183 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 CCNYL3P0C7X3 344 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 FMO4P31512 558 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 RPL26P61254 145 aaKnown RBP12.88□□□□□ -0.35
SMC4-202ENST00000357388 TUBB3Q13509 450 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 GRB14Q14449 540 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 CCNYL2Q5T2Q4 361 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 SLC34A3Q8N130 599 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 TMEM86AQ8N2M4 240 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 TAMM41Q96BW9 452 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 C1GALT1C1Q96EU7 318 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 SETD4Q9NVD3 440 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 NUP50Q9UKX7 468 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 FAM86C2PA6NEL3 165 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 MAGEB3O15480 346 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 SHBGP04278 402 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 IFNA16P05015 189 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 KDELR1P24390 212 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 INHBEP58166 350 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 MYBPC1Q00872 1141 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 SLC6A3Q01959 620 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 PFKFB4Q16877 469 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 CXorf40AQ8TE69 158 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 BHLHE41Q9C0J9 482 aaPredicted RBP12.88□□□□□ -0.35
SMC4-202ENST00000357388 TRPS1Q9UHF7 1281 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 GNEQ9Y223 722 aaKnown RBP12.88□□□□□ -0.35
SMC4-202ENST00000357388 MEMO1Q9Y316 297 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 SPATA31A5Q5VU36 1347 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 SPATA31A7Q8IWB4 1347 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 C1QTNF3-AMACRE9PGA6 284 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 RGL2O15211 777 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 LIASO43766 372 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 INSRRP14616 1297 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 RPL4P36578 427 aaKnown RBP12.88□□□□□ -0.35
SMC4-202ENST00000357388 TUBP50607 506 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 AFTPHQ6ULP2 937 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 TMEM199Q8N511 208 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 ZSWIM2Q8NEG5 633 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 ACER1Q8TDN7 264 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 PRMT6Q96LA8 375 aaPredicted RBP12.88□□□□□ -0.35
SMC4-202ENST00000357388 CST11Q9H112 138 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 KCNN2Q9H2S1 579 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 IGFLR1Q9H665 355 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 PTPRHQ9HD43 1115 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 CHST7Q9NS84 486 aa12.88□□□□□ -0.35
SMC4-202ENST00000357388 GPN3Q9UHW5 284 aaPredicted RBP12.88□□□□□ -0.35
SMC4-202ENST00000357388 DPPA5A6NC42 116 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 TBC1D3BA6NDS4 549 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 KMOO15229 486 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 TULP3O75386 442 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 CYP1A2P05177 515 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 GPIP06744 558 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 PTX3P26022 381 aaPredicted RBP12.87□□□□□ -0.35
SMC4-202ENST00000357388 ORC1Q13415 861 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 RFTN2Q52LD8 501 aaPredicted RBP12.87□□□□□ -0.35
SMC4-202ENST00000357388 DUPD1Q68J44 220 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 TNFAIP8L1Q8WVP5 186 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 POLR1EQ9GZS1 481 aaKnown RBP12.87□□□□□ -0.35
SMC4-202ENST00000357388 RNF208Q9H0X6 261 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 MRPL17Q9NRX2 175 aaKnown RBP12.87□□□□□ -0.35
SMC4-202ENST00000357388 NFASCO94856 1347 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 HGFP14210 728 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 ACADVLP49748 655 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 PTPN5P54829 565 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 BNIP1Q12981 228 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 METTL21CQ5VZV1 264 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 USP43Q70EL4 1123 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 ZZZ3Q8IYH5 903 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 LGI2Q8N0V4 545 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 TTC29Q8NA56 475 aaPredicted RBP12.87□□□□□ -0.35
SMC4-202ENST00000357388 PDCD2LQ9BRP1 358 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 AGO4Q9HCK5 861 aaKnown RBP12.87□□□□□ -0.35
SMC4-202ENST00000357388 GPRC5CQ9NQ84 441 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 SNTG2Q9NY99 539 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 PLK2Q9NYY3 685 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 RBMX2Q9Y388 322 aaKnown RBP12.87□□□□□ -0.35
SMC4-202ENST00000357388 AZIN1O14977 448 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 SPTLC1O15269 473 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 ERBB2P04626 1255 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 NR2F1P10589 423 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 RALGDSQ12967 914 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 ZBTB6Q15916 424 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 MTX3Q5HYI7 312 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 BEND5Q7L4P6 421 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms