RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 HDAC10Q969S8 669 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 CLPTM1LQ96KA5 538 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 PURBQ96QR8 312 aaKnown RBP14.88□□□□□ -0.03
CHD4-201ENST00000357008 RHOBTB2Q9BYZ6 727 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 RACGAP1Q9H0H5 632 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 TMEM138Q9NPI0 162 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 RWDD3Q9Y3V2 267 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 DIP2BQ9P265 1576 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.88□□□□□ -0.03
CHD4-201ENST00000357008 MGRN1O60291 552 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 MTAPQ13126 283 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 OR4L1Q8NH43 312 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 P2RX7Q99572 595 aaKnown RBP14.88□□□□□ -0.03
CHD4-201ENST00000357008 ADGRE2Q9UHX3 823 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 PCDHB12Q9Y5F1 795 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 NR2F1P10589 423 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 PCBP1Q15365 356 aaKnown RBP eCLIP14.88□□□□□ -0.034e-12■■■■□ 25.3
CHD4-201ENST00000357008 CRTC3Q6UUV7 619 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 THAP5Q7Z6K1 395 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 KIAA0319LQ8IZA0 1049 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 PDPRQ8NCN5 879 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 NKD2Q969F2 451 aaPredicted RBP14.88□□□□□ -0.03
CHD4-201ENST00000357008 TLCD1Q96CP7 247 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 QSOX1O00391 747 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 FARP2O94887 1054 aaPredicted RBP14.88□□□□□ -0.03
CHD4-201ENST00000357008 ZBTB11O95625 1053 aaPredicted RBP14.88□□□□□ -0.03
CHD4-201ENST00000357008 FGF1P05230 155 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 PSEN1P49768 467 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 BICRALQ6AI39 1079 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 CNTD1Q8N815 330 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 C4orf32Q8N8J7 132 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 TEFMQ96QE5 360 aaKnown RBP14.88□□□□□ -0.03
CHD4-201ENST00000357008 OSBPL7Q9BZF2 842 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 RPTORQ8N122 1335 aa14.88□□□□□ -0.03
CHD4-201ENST00000357008 CHRNGP07510 517 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 PRDX6P30041 224 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 MRPS5P82675 430 aaKnown RBP14.87□□□□□ -0.03
CHD4-201ENST00000357008 C5orf22Q49AR2 442 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 ARSHQ5FYA8 562 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 CELF3Q5SZQ8 465 aaKnown RBP14.87□□□□□ -0.03
CHD4-201ENST00000357008 EGFLAMQ63HQ2 1017 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 GALNT18Q6P9A2 607 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 CPSF7Q8N684 471 aaKnown RBP14.87□□□□□ -0.03
CHD4-201ENST00000357008 JOSD2Q8TAC2 188 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 LRRN4Q8WUT4 740 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 KREMEN1Q96MU8 473 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 AREL1O15033 823 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 SERPINB7O75635 380 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 BMP7P18075 431 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 TLX1P31314 330 aaPredicted RBP14.87□□□□□ -0.03
CHD4-201ENST00000357008 TGFBR2P37173 567 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 SNRPD1P62314 119 aaKnown RBP14.87□□□□□ -0.03
CHD4-201ENST00000357008 CDK18Q07002 472 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 TDRD1Q9BXT4 1180 aaKnown RBP14.87□□□□□ -0.03
CHD4-201ENST00000357008 GALNT8Q9NY28 637 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 ZNF180Q9UJW8 692 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 DHX15O43143 795 aaKnown RBP14.87□□□□□ -0.03
CHD4-201ENST00000357008 ACADMP11310 421 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 PTCHD4Q6ZW05 846 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 FNDC11Q9BVV2 318 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 SLC39A8Q9C0K1 460 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 GRIN3BO60391 1043 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 S100A1P23297 94 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 ADORA2AP29274 412 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 GALNT3Q14435 633 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 CPSF6Q16630 551 aaKnown RBP eCLIP14.87□□□□□ -0.037e-10■□□□□ 10.9
CHD4-201ENST00000357008 XKR6Q5GH73 641 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 ZFPM1Q8IX07 1006 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 HELQQ8TDG4 1101 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 FAR1Q8WVX9 515 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 LINGO1Q96FE5 620 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 ZDHHC6Q9H6R6 413 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 MOXD2PA6NHM9 499 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 CYP4B1P13584 511 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 WNT3AP56704 352 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 IQSEC1Q6DN90 963 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 PARP8Q8N3A8 854 aa14.87□□□□□ -0.03
CHD4-201ENST00000357008 C2orf71A6NGG8 1288 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 ENO2P09104 434 aaPredicted RBP14.86□□□□□ -0.03
CHD4-201ENST00000357008 CCR4P51679 360 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 DACT2Q5SW24 774 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 C6orf52Q5T4I8 152 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 GLYATQ6IB77 296 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 DOK6Q6PKX4 331 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 SPPL2CQ8IUH8 684 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 PTCH2Q9Y6C5 1203 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 PIK3C2BO00750 1634 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 EME2A4GXA9 379 aaPredicted RBP14.86□□□□□ -0.03
CHD4-201ENST00000357008 PLOD3O60568 738 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 TSPAN9O75954 239 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 IPO13O94829 963 aaKnown RBP14.86□□□□□ -0.03
CHD4-201ENST00000357008 CES1P23141 567 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 SLC6A2P23975 617 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 ECM1Q16610 540 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 PABPC1LQ4VXU2 614 aaKnown RBP14.86□□□□□ -0.03
CHD4-201ENST00000357008 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.86□□□□□ -0.03
CHD4-201ENST00000357008 STRADAQ7RTN6 431 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 TEX47Q8TBZ9 253 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 BPIFA1Q9NP55 256 aa14.86□□□□□ -0.03
CHD4-201ENST00000357008 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.86□□□□□ -0.036e-7■■□□□ 11.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms