RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 SETD1BQ9UPS6 1966 aaKnown RBP14.92□□□□□ -0.02
LMX1B-201ENST00000355497 METTL3Q86U44 580 aaKnown RBP14.92□□□□□ -0.02
LMX1B-201ENST00000355497 SNRNP25Q9BV90 132 aaKnown RBP14.92□□□□□ -0.02
LMX1B-201ENST00000355497 ACE2Q9BYF1 805 aaPredicted RBP14.92□□□□□ -0.02
LMX1B-201ENST00000355497 TMPRSS4Q9NRS4 437 aa14.92□□□□□ -0.02
LMX1B-201ENST00000355497 CKLFQ9UBR5 152 aa14.92□□□□□ -0.02
LMX1B-201ENST00000355497 IQGAP3Q86VI3 1631 aa14.92□□□□□ -0.02
LMX1B-201ENST00000355497 TMEM150BA6NC51 233 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 RECQL4O94761 1208 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 IFNA6P05013 189 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 MNDAP41218 407 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 CASP5P51878 434 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 IL18Q14116 193 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 ZNF554Q86TJ5 538 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 OR10H5Q8NGA6 315 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 RNF157Q96PX1 679 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 TNKS2Q9H2K2 1166 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 PCP4L1A6NKN8 68 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 SLC22A3O75751 556 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 EPHX2P34913 555 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 PPP2R2BQ00005 443 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 SUZ12Q15022 739 aaKnown RBP14.91□□□□□ -0.02
LMX1B-201ENST00000355497 RNF19BQ6ZMZ0 732 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 JAZF1Q86VZ6 243 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 C10orf107Q8IVU9 208 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 SLC34A3Q8N130 599 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 RTKNQ9BST9 563 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 SAMD4AQ9UPU9 718 aaKnown RBP14.91□□□□□ -0.02
LMX1B-201ENST00000355497 NEXMIFQ5QGS0 1516 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 TP73O15350 636 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 ROR2Q01974 943 aaKnown RBP14.91□□□□□ -0.02
LMX1B-201ENST00000355497 NTRK3Q16288 839 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 LEMD2Q8NC56 503 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 IPCEF1Q8WWN9 437 aaPredicted RBP14.91□□□□□ -0.02
LMX1B-201ENST00000355497 CCDC115Q96NT0 180 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 GORASP1Q9BQQ3 440 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 ABCG8Q9H221 673 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 TAS2R14Q9NYV8 317 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 CARNS1A5YM72 827 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 H3BNH8 94 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 CHST10O43529 356 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 TRIM3O75382 744 aaPredicted RBP14.91□□□□□ -0.02
LMX1B-201ENST00000355497 EPHA3P29320 983 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 VBP1P61758 197 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 MYBPC3Q14896 1274 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 WSCD1Q658N2 575 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 FAAH2Q6GMR7 532 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 TMPRSS11AQ6ZMR5 421 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 DENND1CQ8IV53 801 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 MCFD2Q8NI22 146 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 CYP2W1Q8TAV3 490 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 LINGO1Q96FE5 620 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 SNX15Q9NRS6 342 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 H0Y858 1186 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 CCNDBP1O95273 360 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 CDH5P33151 784 aaPredicted RBP14.91□□□□□ -0.02
LMX1B-201ENST00000355497 SDC2P34741 201 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 CHKAP35790 457 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 SLC5A9Q2M3M2 681 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 RNASE12Q5GAN4 147 aaKnown RBP14.91□□□□□ -0.02
LMX1B-201ENST00000355497 NBPF12Q5TAG4 269 aaPredicted RBP14.91□□□□□ -0.02
LMX1B-201ENST00000355497 CCDC80Q76M96 950 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 ATCAYQ86WG3 371 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 EPS8L1Q8TE68 723 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 MGAT4AQ9UM21 535 aa14.91□□□□□ -0.02
LMX1B-201ENST00000355497 RPL26L1Q9UNX3 145 aaKnown RBP14.91□□□□□ -0.02
LMX1B-201ENST00000355497 ISM1B1AKI9 464 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 MDM4O15151 490 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 GIMD1P0DJR0 217 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 CREMQ03060 361 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 SPATA6LQ8N4H0 392 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 FCRL4Q96PJ5 515 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 C3orf14Q9HBI5 128 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 KCNQ5Q9NR82 932 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 XPR1Q9UBH6 696 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 PSEN1P49768 467 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 MTTPP55157 894 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 ARF3P61204 181 aaPredicted RBP14.9□□□□□ -0.02
LMX1B-201ENST00000355497 ARF1P84077 181 aaKnown RBP14.9□□□□□ -0.02
LMX1B-201ENST00000355497 USP41Q3LFD5 358 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 POM121L1PQ3SYA9 428 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 TAPT1Q6NXT6 567 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 EBNA1BP2Q99848 306 aaKnown RBP14.9□□□□□ -0.02
LMX1B-201ENST00000355497 ZNF670Q9BS34 389 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 RPTORQ8N122 1335 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 FAM86C2PA6NEL3 165 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 WFS1O76024 890 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 HNRNPLP14866 589 aaKnown RBP eCLIP14.9□□□□□ -0.02
LMX1B-201ENST00000355497 GLRA2P23416 452 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 ALDH3A2P51648 485 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 DLG4P78352 724 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 KIAA1324Q6UXG2 1013 aaKnown RBP14.9□□□□□ -0.02
LMX1B-201ENST00000355497 BEND5Q7L4P6 421 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 ZNF563Q8TA94 476 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 SEMA3CQ99985 751 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 LRRC19Q9H756 370 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.9□□□□□ -0.02
LMX1B-201ENST00000355497 OPLAHO14841 1288 aa14.9□□□□□ -0.02
LMX1B-201ENST00000355497 TFECO14948 347 aaPredicted RBP14.9□□□□□ -0.02
LMX1B-201ENST00000355497 DRD4P21917 467 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms