RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 SLC5A3P53794 718 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 ZNF280AP59817 542 aaPredicted RBP16.39■□□□□ 0.21
SHTN1-202ENST00000355371 PDZK1Q5T2W1 519 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 RNASEH2BQ5TBB1 312 aaKnown RBP16.39■□□□□ 0.21
SHTN1-202ENST00000355371 ABRAXAS1Q6UWZ7 409 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 MARK2Q7KZI7 788 aaKnown RBP16.39■□□□□ 0.21
SHTN1-202ENST00000355371 HOPXQ9BPY8 73 aaPredicted RBP16.39■□□□□ 0.21
SHTN1-202ENST00000355371 PADI3Q9ULW8 664 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 NTRK1P04629 796 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 LINC00032P0C843 101 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 DUSP4Q13115 394 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 NPY5RQ15761 445 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 FNBP1LQ5T0N5 605 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 KLHL25Q9H0H3 589 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 GMIPQ9P107 970 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 LGALS13Q9UHV8 139 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 HBS1LQ9Y450 684 aaKnown RBP16.39■□□□□ 0.21
SHTN1-202ENST00000355371 KNDC1Q76NI1 1749 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 A0A1W2PQ67 120 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 URADA6NGE7 173 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 WARSP23381 471 aaKnown RBP16.39■□□□□ 0.21
SHTN1-202ENST00000355371 MPPE1Q53F39 396 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 HECTD2Q5U5R9 776 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 REM2Q8IYK8 340 aaPredicted RBP16.39■□□□□ 0.21
SHTN1-202ENST00000355371 DCUN1D5Q9BTE7 237 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 CCDC28BQ9BUN5 200 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 PAIP1Q9H074 479 aaKnown RBP16.39■□□□□ 0.21
SHTN1-202ENST00000355371 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.39■□□□□ 0.21
SHTN1-202ENST00000355371 SLC22A3O75751 556 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 ADH1CP00326 375 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 TSPAN8P19075 237 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 TCEA2Q15560 299 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 ZNHIT3Q15649 155 aaPredicted RBP16.39■□□□□ 0.21
SHTN1-202ENST00000355371 FAM151BQ6UXP7 276 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 DQX1Q8TE96 717 aaKnown RBP16.39■□□□□ 0.21
SHTN1-202ENST00000355371 OR8D1Q8WZ84 308 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 TCF12Q99081 682 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 MRPS26Q9BYN8 205 aaKnown RBP16.39■□□□□ 0.21
SHTN1-202ENST00000355371 NDOR1Q9UHB4 597 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 DAPK2Q9UIK4 370 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 MSRAQ9UJ68 235 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 COQ4Q9Y3A0 265 aa16.39■□□□□ 0.21
SHTN1-202ENST00000355371 ZNF541Q9H0D2 1346 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 TCRBV7S2A1N4TA0A589 114 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 SOWAHBA6NEL2 793 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 SCAMP3O14828 347 aaKnown RBP16.38■□□□□ 0.21
SHTN1-202ENST00000355371 SYN3O14994 580 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 NDST3O95803 873 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 GABRR2P28476 465 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 PDK3Q15120 406 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 BROXQ5VW32 411 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 RSBN1Q5VWQ0 802 aaPredicted RBP16.38■□□□□ 0.21
SHTN1-202ENST00000355371 TDRPQ86YL5 185 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 GPR152Q8TDT2 470 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 DNAJC28Q9NX36 388 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 GLUD1P00367 558 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 CHRNB2P17787 502 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 FECHP22830 423 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 SPANXN2Q5MJ10 180 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 CNSTQ6PJW8 725 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 GATAD2AQ86YP4 633 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 CXorf40BQ96DE9 158 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 Q96MT0 163 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 OSBPL11Q9BXB4 747 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 EFCAB10A6NFE3 127 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 NOL9Q5SY16 702 aaKnown RBP16.38■□□□□ 0.21
SHTN1-202ENST00000355371 DEPDC4Q8N2C3 294 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 OLFM1Q99784 485 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 C1orf50Q9BV19 199 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 SLITRK2Q9H156 845 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 GLTPD2A6NH11 291 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 PRMT5O14744 637 aaPredicted RBP16.38■□□□□ 0.21
SHTN1-202ENST00000355371 NDUFB5O43674 189 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 IPO13O94829 963 aaKnown RBP16.38■□□□□ 0.21
SHTN1-202ENST00000355371 ADSSP30520 456 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 GSTM5P46439 218 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 ABRQ12979 859 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 B3GNT6Q6ZMB0 384 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 NEK10Q6ZWH5 1172 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 TSPAN14Q8NG11 270 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 GRIP2Q9C0E4 1043 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 ARHGEF4Q9NR80 690 aa16.38■□□□□ 0.21
SHTN1-202ENST00000355371 A0A0G2JLL6 359 aaPredicted RBP16.37■□□□□ 0.21
SHTN1-202ENST00000355371 DHRS12A0PJE2 317 aa16.37■□□□□ 0.21
SHTN1-202ENST00000355371 C2CD4BA6NLJ0 364 aa16.37■□□□□ 0.21
SHTN1-202ENST00000355371 IL1BP01584 269 aa16.37■□□□□ 0.21
SHTN1-202ENST00000355371 RFX4Q33E94 735 aa16.37■□□□□ 0.21
SHTN1-202ENST00000355371 LSM12Q3MHD2 195 aaKnown RBP16.37■□□□□ 0.21
SHTN1-202ENST00000355371 MACC1Q6ZN28 852 aa16.37■□□□□ 0.21
SHTN1-202ENST00000355371 PRRT2Q7Z6L0 340 aaPredicted RBP16.37■□□□□ 0.21
SHTN1-202ENST00000355371 STYXQ8WUJ0 223 aa16.37■□□□□ 0.21
SHTN1-202ENST00000355371 HDHD2Q9H0R4 259 aa16.37■□□□□ 0.21
SHTN1-202ENST00000355371 ZFYVE1Q9HBF4 777 aa16.37■□□□□ 0.21
SHTN1-202ENST00000355371 PCDH12Q9NPG4 1184 aa16.37■□□□□ 0.21
SHTN1-202ENST00000355371 SALL4Q9UJQ4 1053 aa16.37■□□□□ 0.21
SHTN1-202ENST00000355371 CXCL14O95715 111 aa16.37■□□□□ 0.21
SHTN1-202ENST00000355371 PKMP14618 531 aaKnown RBP16.37■□□□□ 0.21
SHTN1-202ENST00000355371 EPORP19235 508 aa16.37■□□□□ 0.21
SHTN1-202ENST00000355371 COX10Q12887 443 aa16.37■□□□□ 0.21
SHTN1-202ENST00000355371 C16orf72Q14CZ0 275 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms