RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 ZFP14Q9HCL3 533 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 ACP6Q9NPH0 428 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 DHRS7Q9Y394 339 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 OR6A2O95222 327 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 METTL18O95568 372 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 PSEN1P49768 467 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 OR2B6P58173 313 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 UBR7Q8N806 425 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 RNASE11Q8TAA1 199 aaKnown RBP12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 MLXQ9UH92 298 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 VPS51Q9UID3 782 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 FBXO5Q9UKT4 447 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 M0QX08 132 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 EML1O00423 815 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 GPR182O15218 404 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 MPZL2O60487 215 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 MBL2P11226 248 aaPredicted RBP12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 NIPAL1Q6NVV3 410 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 ZZZ3Q8IYH5 903 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 ZNF655Q8N720 491 aaPredicted RBP12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 LRRC57Q8N9N7 239 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 COQ10BQ9H8M1 238 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.74□□□□□ -0.373e-6■■□□□ 11.8
SYNCRIP-201ENST00000355238 MFHAS1Q9Y4C4 1052 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 CNTNAP2Q9UHC6 1331 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 C17orf102A2RUQ5 167 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 ZNF99A8MXY4 864 aaPredicted RBP12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 DHX15O43143 795 aaKnown RBP12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 ENDOD1O94919 500 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 UPP2O95045 317 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 ASLP04424 464 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 PTPN5P54829 565 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 APTXQ7Z2E3 356 aaKnown RBP12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 CMC1Q7Z7K0 106 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 ATL1Q8WXF7 558 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 S100A13Q99584 98 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 C1QTNF1Q9BXJ1 281 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 DSN1Q9H410 356 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 ATP13A1Q9HD20 1204 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 KCNU1A8MYU2 1149 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 TBX10O75333 385 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 PPM1LQ5SGD2 360 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 OVOS1Q6IE37 1185 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 LLGL2Q6P1M3 1020 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 POTEHQ6S545 545 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 FAM183BPQ6ZVS7 135 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 UNC93AQ86WB7 457 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 SLC2A14Q8TDB8 520 aa12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 C11orf24Q96F05 449 aaPredicted RBP12.74□□□□□ -0.37
SYNCRIP-201ENST00000355238 UGT1A9O60656 530 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 AP2A2O94973 939 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 C2P06681 752 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 ADRB2P07550 413 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 UGT1A6P19224 532 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 UGT1A1P22309 533 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 UGT1A4P22310 534 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 UGT1A3P35503 534 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 UGT1A5P35504 534 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 SUZ12Q15022 739 aaKnown RBP12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 PGM5Q15124 567 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 IL17AQ16552 155 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 ZNF570Q96NI8 536 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 ERMAPQ96PL5 475 aaPredicted RBP12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 TMEM134Q9H6X4 195 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 UGT1A7Q9HAW7 530 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 UGT1A10Q9HAW8 530 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 UGT1A8Q9HAW9 530 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 A0A0X1KG70 313 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 RPLP0P05388 317 aaKnown RBP12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 BMP7P18075 431 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 TSPAN8P19075 237 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 CAP2P40123 477 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 PTP4A2Q12974 167 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 ARHGAP15Q53QZ3 475 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 SULT1C3Q6IMI6 304 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 POMGNT2Q8NAT1 580 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 NKD2Q969F2 451 aaPredicted RBP12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 FDXACB1Q9BRP7 624 aaPredicted RBP12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 FNDC11Q9BVV2 318 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 MAGEE1Q9HCI5 957 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 RAD18Q9NS91 495 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 PDP1Q9P0J1 537 aaPredicted RBP12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 VTNP04004 478 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 RPN2P04844 631 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 AP3S2P59780 193 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 NOMO1Q15155 1222 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 METTL7BQ6UX53 244 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 BRINP3Q76B58 766 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 CHPFQ8IZ52 775 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 ZFP28Q8NHY6 868 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 CYP2W1Q8TAV3 490 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 ACER1Q8TDN7 264 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 LENG9Q96B70 501 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 LRRC42Q9Y546 428 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 FAM172BPA6NC97 362 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 LACTBL1A8MY62 500 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 FTH1P02794 183 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 YES1P07947 543 aa12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 POLR2JP52435 117 aaKnown RBP12.73□□□□□ -0.37
SYNCRIP-201ENST00000355238 SIM2Q14190 667 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms