RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 SHHQ15465 462 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 FAM109BQ6ICB4 259 aaPredicted RBP17.25■□□□□ 0.35
VPS13B-201ENST00000355155 ADGRG2Q8IZP9 1017 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 MYO19Q96H55 970 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 MECRQ9BV79 373 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 TRIM55Q9BYV6 548 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 CAB39LQ9H9S4 337 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 IGSF5Q9NSI5 407 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 CATSPERZQ9NTU4 200 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 KCNK4Q9NYG8 393 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 MARCH4Q9P2E8 410 aaPredicted RBP17.25■□□□□ 0.35
VPS13B-201ENST00000355155 VPS9D1Q9Y2B5 631 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 COMMD10Q9Y6G5 202 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 DCTN3O75935 186 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 DNAJB13P59910 316 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 IRF9Q00978 393 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 STX3Q13277 289 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 ARMC12Q5T9G4 340 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 RNF187Q5TA31 235 aaPredicted RBP17.25■□□□□ 0.35
VPS13B-201ENST00000355155 HECTD2Q5U5R9 776 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 ASTLQ6HA08 431 aaPredicted RBP17.25■□□□□ 0.35
VPS13B-201ENST00000355155 C16orf46Q6P387 395 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 GLT6D1Q7Z4J2 308 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 GRASPQ7Z6J2 395 aaPredicted RBP17.25■□□□□ 0.35
VPS13B-201ENST00000355155 TMEM25Q86YD3 366 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 OR2AP1Q8NGE2 309 aa17.25■□□□□ 0.35
VPS13B-201ENST00000355155 WDR91A4D1P6 747 aa17.24■□□□□ 0.35
VPS13B-201ENST00000355155 TIAL1Q01085 375 aaKnown RBP eCLIP17.24■□□□□ 0.35
VPS13B-201ENST00000355155 DLG2Q15700 870 aa17.24■□□□□ 0.35
VPS13B-201ENST00000355155 ADGRD2Q7Z7M1 963 aa17.24■□□□□ 0.35
VPS13B-201ENST00000355155 CBARPQ8N350 705 aaPredicted RBP17.24■□□□□ 0.35
VPS13B-201ENST00000355155 OTUD6BQ8N6M0 293 aa17.24■□□□□ 0.35
VPS13B-201ENST00000355155 OR13C4Q8NGS5 318 aa17.24■□□□□ 0.35
VPS13B-201ENST00000355155 ZSWIM3Q96MP5 696 aa17.24■□□□□ 0.35
VPS13B-201ENST00000355155 SMG9Q9H0W8 520 aaKnown RBP17.24■□□□□ 0.35
VPS13B-201ENST00000355155 OXSMQ9NWU1 459 aa17.24■□□□□ 0.35
VPS13B-201ENST00000355155 IL17CQ9P0M4 197 aa17.24■□□□□ 0.35
VPS13B-201ENST00000355155 PCDHGC4Q9Y5F7 938 aa17.24■□□□□ 0.35
VPS13B-201ENST00000355155 SMAD6O43541 496 aaKnown RBP17.24■□□□□ 0.35
VPS13B-201ENST00000355155 PABPC1P11940 636 aaKnown RBP17.24■□□□□ 0.35
VPS13B-201ENST00000355155 HMGCLP35914 325 aa17.24■□□□□ 0.35
VPS13B-201ENST00000355155 SERPINB5P36952 375 aa17.24■□□□□ 0.35
VPS13B-201ENST00000355155 BNIP1Q12981 228 aa17.24■□□□□ 0.35
VPS13B-201ENST00000355155 LPCAT1Q8NF37 534 aa17.24■□□□□ 0.35
VPS13B-201ENST00000355155 EXOC2Q96KP1 924 aa17.24■□□□□ 0.35
VPS13B-201ENST00000355155 RMDN2Q96LZ7 410 aa17.24■□□□□ 0.35
VPS13B-201ENST00000355155 OLFM1Q99784 485 aa17.24■□□□□ 0.35
VPS13B-201ENST00000355155 FAM96AQ9H5X1 160 aa17.24■□□□□ 0.35
VPS13B-201ENST00000355155 FBXO6Q9NRD1 293 aaPredicted RBP17.24■□□□□ 0.35
VPS13B-201ENST00000355155 VWA7Q9Y334 891 aa17.24■□□□□ 0.35
VPS13B-201ENST00000355155 TSPAN11A1L157 253 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 GRXCR1A8MXD5 290 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 MAGEA10P43363 369 aaPredicted RBP17.23■□□□□ 0.35
VPS13B-201ENST00000355155 SNRPD1P62314 119 aaKnown RBP17.23■□□□□ 0.35
VPS13B-201ENST00000355155 TMPRSS15P98073 1019 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 XIAPP98170 497 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 SEMA3AQ14563 771 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 ZNF789Q5FWF6 425 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 DGKKQ5KSL6 1271 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 LRRC8EQ6NSJ5 796 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 C22orf39Q6P5X5 142 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 SDCCAG8Q86SQ7 713 aaPredicted RBP17.23■□□□□ 0.35
VPS13B-201ENST00000355155 ADIPOR2Q86V24 386 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 HCAR2Q8TDS4 363 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 WFIKKN2Q8TEU8 576 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 ELMO2Q96JJ3 720 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 ZNF641Q96N77 438 aaPredicted RBP17.23■□□□□ 0.35
VPS13B-201ENST00000355155 MRPL57Q9BQC6 102 aaKnown RBP17.23■□□□□ 0.35
VPS13B-201ENST00000355155 AARSD1Q9BTE6 412 aaKnown RBP17.23■□□□□ 0.35
VPS13B-201ENST00000355155 SLC27A6Q9Y2P4 619 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 ZNF711Q9Y462 761 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 A0A0J9YYE9 177 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 AURKAO14965 403 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 DNAJC8O75937 253 aaPredicted RBP17.23■□□□□ 0.35
VPS13B-201ENST00000355155 TRBC1P01850 177 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 CISD3P0C7P0 127 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 ACTN3Q08043 901 aaPredicted RBP17.23■□□□□ 0.35
VPS13B-201ENST00000355155 DLG1Q12959 904 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 ZNF549Q6P9A3 640 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 TPGS1Q6ZTW0 290 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 C10orf107Q8IVU9 208 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 AHI1Q8N157 1196 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 DTX3LQ8TDB6 740 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 LPGAT1Q92604 370 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 ATP13A3Q9H7F0 1226 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 ABCF3Q9NUQ8 709 aa17.23■□□□□ 0.35
VPS13B-201ENST00000355155 CCDC78A2IDD5 438 aa17.22■□□□□ 0.35
VPS13B-201ENST00000355155 K7ERQ8 282 aa17.22■□□□□ 0.35
VPS13B-201ENST00000355155 NTHL1P78549 312 aa17.22■□□□□ 0.35
VPS13B-201ENST00000355155 RAB30Q15771 203 aa17.22■□□□□ 0.35
VPS13B-201ENST00000355155 RBM20Q5T481 1227 aaKnown RBP17.22■□□□□ 0.35
VPS13B-201ENST00000355155 ARID3BQ8IVW6 561 aaPredicted RBP17.22■□□□□ 0.35
VPS13B-201ENST00000355155 OSCP1Q8WVF1 389 aa17.22■□□□□ 0.35
VPS13B-201ENST00000355155 RMDN1Q96DB5 314 aa17.22■□□□□ 0.35
VPS13B-201ENST00000355155 MCCC1Q96RQ3 725 aaPredicted RBP17.22■□□□□ 0.35
VPS13B-201ENST00000355155 SORT1Q99523 831 aa17.22■□□□□ 0.35
VPS13B-201ENST00000355155 MYLK2Q9H1R3 596 aa17.22■□□□□ 0.35
VPS13B-201ENST00000355155 CAPN8A6NHC0 703 aa17.22■□□□□ 0.35
VPS13B-201ENST00000355155 PFKPQ01813 784 aa17.22■□□□□ 0.35
VPS13B-201ENST00000355155 BCL2L1Q07817 233 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms