RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 ADCY4Q8NFM4 1077 aa19.61■□□□□ 0.73
COL13A1-201ENST00000354547 SUSD3Q96L08 255 aa19.61■□□□□ 0.73
COL13A1-201ENST00000354547 UBXN10Q96LJ8 280 aa19.61■□□□□ 0.73
COL13A1-201ENST00000354547 TRMT13Q9NUP7 481 aaKnown RBP19.61■□□□□ 0.73
COL13A1-201ENST00000354547 SLC27A5Q9Y2P5 690 aa19.61■□□□□ 0.73
COL13A1-201ENST00000354547 Q9Y3F1 56 aa19.61■□□□□ 0.73
COL13A1-201ENST00000354547 UBA6A0AVT1 1052 aaPredicted RBP19.6■□□□□ 0.73
COL13A1-201ENST00000354547 UBXN8O00124 270 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 CALRP27797 417 aaKnown RBP19.6■□□□□ 0.73
COL13A1-201ENST00000354547 ZNF157P51786 506 aaPredicted RBP19.6■□□□□ 0.73
COL13A1-201ENST00000354547 SLC7A2P52569 658 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 SATB1Q01826 763 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 FBXL22Q6P050 247 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 CFAP52Q8N1V2 620 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 PTGR2Q8N8N7 351 aaPredicted RBP19.6■□□□□ 0.73
COL13A1-201ENST00000354547 TMEM102Q8N9M5 508 aaPredicted RBP19.6■□□□□ 0.73
COL13A1-201ENST00000354547 ASB9Q96DX5 294 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 CCDC126Q96EE4 140 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 CIB1Q99828 191 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 NR5A2O00482 541 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 KIF3CO14782 793 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 RAB27AP51159 221 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 RFTN1Q14699 578 aaPredicted RBP19.6■□□□□ 0.73
COL13A1-201ENST00000354547 MGAT5BQ3V5L5 792 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 DLG3Q92796 817 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 UNC93B1Q9H1C4 597 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 NOL11Q9H8H0 719 aaKnown RBP19.6■□□□□ 0.73
COL13A1-201ENST00000354547 MID1IP1Q9NPA3 183 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 RAB26Q9ULW5 256 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 BTRCQ9Y297 605 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 ZNF839A8K0R7 811 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 TFAP2AP05549 437 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 CTGFP29279 349 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 FOXA1P55317 472 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 SH3BP2P78314 561 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 MGAT3Q09327 533 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 POLD3Q15054 466 aaPredicted RBP19.6■□□□□ 0.73
COL13A1-201ENST00000354547 MAP7D1Q3KQU3 841 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 C10orf120Q5SQS8 335 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 CYHR1Q6ZMK1 362 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 CHSY3Q70JA7 882 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 NUP93Q8N1F7 819 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 MYO1HQ8N1T3 1032 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 METTL25Q8N6Q8 603 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 KLHDC9Q8NEP7 349 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 MYEOVQ96EZ4 313 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 SPAG4Q9NPE6 437 aa19.6■□□□□ 0.73
COL13A1-201ENST00000354547 NRP2O60462 931 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 GOT2P00505 430 aaKnown RBP19.59■□□□□ 0.73
COL13A1-201ENST00000354547 ASGR1P07306 291 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 HSPA1AP0DMV8 641 aaKnown RBP19.59■□□□□ 0.73
COL13A1-201ENST00000354547 HSPA1BP0DMV9 641 aaKnown RBP19.59■□□□□ 0.73
COL13A1-201ENST00000354547 SLC2A3P11169 496 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 IMPDH1P20839 514 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 DNAJB1P25685 340 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 NADK2Q4G0N4 442 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 UNC50Q53HI1 259 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 MTX3Q5HYI7 312 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 ZNF678Q5SXM1 525 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 MON1AQ86VX9 555 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 HERC6Q8IVU3 1022 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 ZFAND2BQ8WV99 257 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 C19orf60Q96EN9 201 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 CROTQ9UKG9 612 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 FAM50BQ9Y247 325 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 TLR6Q9Y2C9 796 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 ZNF623O75123 536 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 TIPRLO75663 272 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 ALDOCP09972 364 aaKnown RBP19.59■□□□□ 0.73
COL13A1-201ENST00000354547 OR1E1P30953 314 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 STX1BP61266 288 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 SEMA3AQ14563 771 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 VPS26BQ4G0F5 336 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 ZNF549Q6P9A3 640 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 CCDC117Q8IWD4 279 aaPredicted RBP19.59■□□□□ 0.73
COL13A1-201ENST00000354547 SCML4Q8N228 414 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 CATSPER1Q8NEC5 780 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 GABPB2Q8TAK5 448 aaPredicted RBP19.59■□□□□ 0.73
COL13A1-201ENST00000354547 DIS3LQ8TF46 1054 aaKnown RBP19.59■□□□□ 0.73
COL13A1-201ENST00000354547 FAR2Q96K12 515 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 SMIM14Q96QK8 99 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 AKTIPQ9H8T0 292 aa19.59■□□□□ 0.73
COL13A1-201ENST00000354547 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.59■□□□□ 0.73
COL13A1-201ENST00000354547 C7orf72A4D263 438 aa19.58■□□□□ 0.73
COL13A1-201ENST00000354547 NCF1BA6NI72 391 aaPredicted RBP19.58■□□□□ 0.73
COL13A1-201ENST00000354547 NCF1CA8MVU1 366 aaPredicted RBP19.58■□□□□ 0.73
COL13A1-201ENST00000354547 MUSKO15146 869 aa19.58■□□□□ 0.73
COL13A1-201ENST00000354547 TPST1O60507 370 aa19.58■□□□□ 0.73
COL13A1-201ENST00000354547 SRP72O76094 671 aaKnown RBP19.58■□□□□ 0.73
COL13A1-201ENST00000354547 NCF1P14598 390 aaPredicted RBP19.58■□□□□ 0.73
COL13A1-201ENST00000354547 RHOQP17081 205 aa19.58■□□□□ 0.73
COL13A1-201ENST00000354547 ECT2LQ008S8 904 aa19.58■□□□□ 0.73
COL13A1-201ENST00000354547 MAPRE2Q15555 327 aa19.58■□□□□ 0.73
COL13A1-201ENST00000354547 TICAM1Q8IUC6 712 aa19.58■□□□□ 0.73
COL13A1-201ENST00000354547 UMODL1-AS1Q8N2C9 162 aa19.58■□□□□ 0.73
COL13A1-201ENST00000354547 TRPC4APQ8TEL6 797 aa19.58■□□□□ 0.73
COL13A1-201ENST00000354547 EXOC2Q96KP1 924 aa19.58■□□□□ 0.73
COL13A1-201ENST00000354547 PPP1R2P1Q96PQ5 205 aa19.58■□□□□ 0.73
COL13A1-201ENST00000354547 ARHGAP39Q9C0H5 1083 aa19.58■□□□□ 0.73
COL13A1-201ENST00000354547 SPC25Q9HBM1 224 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms