RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 NUP62CLQ9H1M0 184 aa15.93■□□□□ 0.14
DDX55-202ENST00000354291 SYNCQ9H7C4 482 aa15.93■□□□□ 0.14
DDX55-202ENST00000354291 SIX2Q9NPC8 291 aa15.93■□□□□ 0.14
DDX55-202ENST00000354291 CASS4Q9NQ75 786 aa15.93■□□□□ 0.14
DDX55-202ENST00000354291 RRN3Q9NYV6 651 aa15.93■□□□□ 0.14
DDX55-202ENST00000354291 KCNMB2Q9Y691 235 aa15.93■□□□□ 0.14
DDX55-202ENST00000354291 ARHGEF17Q96PE2 2063 aaPredicted RBP15.93■□□□□ 0.14
DDX55-202ENST00000354291 ECEL1O95672 775 aa15.92■□□□□ 0.14
DDX55-202ENST00000354291 F9P00740 461 aa15.92■□□□□ 0.14
DDX55-202ENST00000354291 FGF1P05230 155 aa15.92■□□□□ 0.14
DDX55-202ENST00000354291 TNFRSF8P28908 595 aa15.92■□□□□ 0.14
DDX55-202ENST00000354291 CLCN1P35523 988 aa15.92■□□□□ 0.14
DDX55-202ENST00000354291 LIG3P49916 1009 aa15.92■□□□□ 0.14
DDX55-202ENST00000354291 GEMIN4P57678 1058 aaKnown RBP15.92■□□□□ 0.14
DDX55-202ENST00000354291 RAB15P59190 212 aa15.92■□□□□ 0.14
DDX55-202ENST00000354291 ELP6Q0PNE2 266 aa15.92■□□□□ 0.14
DDX55-202ENST00000354291 MTM1Q13496 603 aa15.92■□□□□ 0.14
DDX55-202ENST00000354291 ARTNQ5T4W7 220 aa15.92■□□□□ 0.14
DDX55-202ENST00000354291 SLC26A9Q7LBE3 791 aa15.92■□□□□ 0.14
DDX55-202ENST00000354291 TIPARPQ7Z3E1 657 aaKnown RBP15.92■□□□□ 0.14
DDX55-202ENST00000354291 FAM71AQ8IYT1 594 aa15.92■□□□□ 0.14
DDX55-202ENST00000354291 FUBP1Q96AE4 644 aaKnown RBP15.92■□□□□ 0.14
DDX55-202ENST00000354291 HMCESQ96FZ2 354 aa15.92■□□□□ 0.14
DDX55-202ENST00000354291 TBCBQ99426 244 aa15.92■□□□□ 0.14
DDX55-202ENST00000354291 ZMYND15Q9H091 742 aa15.92■□□□□ 0.14
DDX55-202ENST00000354291 CUEDC1Q9NWM3 386 aaPredicted RBP15.92■□□□□ 0.14
DDX55-202ENST00000354291 TMEM9Q9P0T7 183 aa15.92■□□□□ 0.14
DDX55-202ENST00000354291 DNAI1Q9UI46 699 aa15.92■□□□□ 0.14
DDX55-202ENST00000354291 STAP1Q9ULZ2 295 aa15.92■□□□□ 0.14
DDX55-202ENST00000354291 KCTD3Q9Y597 815 aa15.92■□□□□ 0.14
DDX55-202ENST00000354291 MRPS18BQ9Y676 258 aaKnown RBP15.92■□□□□ 0.14
DDX55-202ENST00000354291 CHD5Q8TDI0 1954 aa15.92■□□□□ 0.14
DDX55-202ENST00000354291 CSMD1Q96PZ7 3565 aa15.92■□□□□ 0.14
DDX55-202ENST00000354291 B4E171 279 aa15.91■□□□□ 0.14
DDX55-202ENST00000354291 ELAVL4P26378 380 aaKnown RBP15.91■□□□□ 0.14
DDX55-202ENST00000354291 ETFBP38117 255 aa15.91■□□□□ 0.14
DDX55-202ENST00000354291 TSPAN7P41732 249 aa15.91■□□□□ 0.14
DDX55-202ENST00000354291 MIIPQ5JXC2 388 aa15.91■□□□□ 0.14
DDX55-202ENST00000354291 ACBD5Q5T8D3 534 aaPredicted RBP15.91■□□□□ 0.14
DDX55-202ENST00000354291 CLEC17AQ6ZS10 378 aa15.91■□□□□ 0.14
DDX55-202ENST00000354291 MAMDC2Q7Z304 686 aaPredicted RBP15.91■□□□□ 0.14
DDX55-202ENST00000354291 ZNF438Q7Z4V0 828 aa15.91■□□□□ 0.14
DDX55-202ENST00000354291 SLC47A2Q86VL8 602 aa15.91■□□□□ 0.14
DDX55-202ENST00000354291 ZDHHC17Q8IUH5 632 aa15.91■□□□□ 0.14
DDX55-202ENST00000354291 RTP4Q96DX8 246 aa15.91■□□□□ 0.14
DDX55-202ENST00000354291 GDAP1L1Q96MZ0 367 aa15.91■□□□□ 0.14
DDX55-202ENST00000354291 TTYH3Q9C0H2 523 aa15.91■□□□□ 0.14
DDX55-202ENST00000354291 PCDH12Q9NPG4 1184 aa15.91■□□□□ 0.14
DDX55-202ENST00000354291 NDFIP2Q9NV92 336 aa15.91■□□□□ 0.14
DDX55-202ENST00000354291 DKK3Q9UBP4 350 aa15.91■□□□□ 0.14
DDX55-202ENST00000354291 A8MU76 341 aa15.9■□□□□ 0.14
DDX55-202ENST00000354291 PES1O00541 588 aaKnown RBP15.9■□□□□ 0.14
DDX55-202ENST00000354291 INSIG1O15503 277 aa15.9■□□□□ 0.14
DDX55-202ENST00000354291 BUB1O43683 1085 aa15.9■□□□□ 0.14
DDX55-202ENST00000354291 DDAH2O95865 285 aa15.9■□□□□ 0.14
DDX55-202ENST00000354291 THRAP10827 490 aa15.9■□□□□ 0.14
DDX55-202ENST00000354291 KELP23276 732 aa15.9■□□□□ 0.14
DDX55-202ENST00000354291 ANP32AP39687 249 aaKnown RBP15.9■□□□□ 0.14
DDX55-202ENST00000354291 GPR3P46089 330 aa15.9■□□□□ 0.14
DDX55-202ENST00000354291 ABHD18Q0P651 414 aa15.9■□□□□ 0.14
DDX55-202ENST00000354291 EIF2S3LQ2VIR3 472 aaKnown RBP15.9■□□□□ 0.14
DDX55-202ENST00000354291 SNAP47Q5SQN1 464 aa15.9■□□□□ 0.14
DDX55-202ENST00000354291 RWDD4Q6NW29 188 aaKnown RBP15.9■□□□□ 0.14
DDX55-202ENST00000354291 ZNF354CQ86Y25 554 aa15.9■□□□□ 0.14
DDX55-202ENST00000354291 C1orf131Q8NDD1 294 aaKnown RBP15.9■□□□□ 0.14
DDX55-202ENST00000354291 PATE1Q8WXA2 126 aa15.9■□□□□ 0.14
DDX55-202ENST00000354291 TEFMQ96QE5 360 aaKnown RBP15.9■□□□□ 0.14
DDX55-202ENST00000354291 SPRY4Q9C004 299 aa15.9■□□□□ 0.14
DDX55-202ENST00000354291 PDCL3Q9H2J4 239 aa15.9■□□□□ 0.14
DDX55-202ENST00000354291 AJAP1Q9UKB5 411 aaPredicted RBP15.9■□□□□ 0.14
DDX55-202ENST00000354291 PCDHB3Q9Y5E6 796 aa15.9■□□□□ 0.14
DDX55-202ENST00000354291 TNFRSF10CO14798 259 aa15.89■□□□□ 0.13
DDX55-202ENST00000354291 PPM1DO15297 605 aa15.89■□□□□ 0.13
DDX55-202ENST00000354291 TEX33O43247 280 aa15.89■□□□□ 0.13
DDX55-202ENST00000354291 TMCC1O94876 653 aa15.89■□□□□ 0.13
DDX55-202ENST00000354291 PIGNO95427 931 aa15.89■□□□□ 0.13
DDX55-202ENST00000354291 IGSF6O95976 241 aa15.89■□□□□ 0.13
DDX55-202ENST00000354291 CCNB1P14635 433 aa15.89■□□□□ 0.13
DDX55-202ENST00000354291 EEF1GP26641 437 aaKnown RBP15.89■□□□□ 0.13
DDX55-202ENST00000354291 NOP2P46087 812 aaKnown RBP15.89■□□□□ 0.13
DDX55-202ENST00000354291 SUOXP51687 545 aa15.89■□□□□ 0.13
DDX55-202ENST00000354291 KIAA1024LP59773 190 aa15.89■□□□□ 0.13
DDX55-202ENST00000354291 RHOAP61586 193 aa15.89■□□□□ 0.13
DDX55-202ENST00000354291 RAPGEF1Q13905 1077 aa15.89■□□□□ 0.13
DDX55-202ENST00000354291 ERV3-1Q14264 604 aa15.89■□□□□ 0.13
DDX55-202ENST00000354291 NR1D2Q14995 579 aa15.89■□□□□ 0.13
DDX55-202ENST00000354291 UGP2Q16851 508 aa15.89■□□□□ 0.13
DDX55-202ENST00000354291 HSP90AA4PQ58FG1 418 aa15.89■□□□□ 0.13
DDX55-202ENST00000354291 KLHDC7AQ5VTJ3 777 aa15.89■□□□□ 0.13
DDX55-202ENST00000354291 ERAP2Q6P179 960 aa15.89■□□□□ 0.13
DDX55-202ENST00000354291 C17orf82Q86X59 251 aaPredicted RBP15.89■□□□□ 0.13
DDX55-202ENST00000354291 TMEM35BQ8NCS4 154 aa15.89■□□□□ 0.13
DDX55-202ENST00000354291 ZNF397Q8NF99 534 aaPredicted RBP15.89■□□□□ 0.13
DDX55-202ENST00000354291 PGAP3Q96FM1 320 aaPredicted RBP15.89■□□□□ 0.13
DDX55-202ENST00000354291 NCAPGQ9BPX3 1015 aa15.89■□□□□ 0.13
DDX55-202ENST00000354291 LGR4Q9BXB1 951 aa15.89■□□□□ 0.13
DDX55-202ENST00000354291 CARS2Q9HA77 564 aaKnown RBP15.89■□□□□ 0.13
DDX55-202ENST00000354291 TMEM51Q9NW97 253 aa15.89■□□□□ 0.13
DDX55-202ENST00000354291 TAAR2Q9P1P5 351 aa15.89■□□□□ 0.13
DDX55-202ENST00000354291 TLK1Q9UKI8 766 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms