RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 CXCL17Q6UXB2 119 aa18.14■□□□□ 0.5
PTP4A3-202ENST00000349124 B3GNT6Q6ZMB0 384 aa18.14■□□□□ 0.5
PTP4A3-202ENST00000349124 CIR1Q86X95 450 aaPredicted RBP18.14■□□□□ 0.5
PTP4A3-202ENST00000349124 EZH1Q92800 747 aaPredicted RBP18.14■□□□□ 0.5
PTP4A3-202ENST00000349124 PSMG2Q969U7 264 aa18.14■□□□□ 0.5
PTP4A3-202ENST00000349124 TMEM79Q9BSE2 394 aa18.14■□□□□ 0.5
PTP4A3-202ENST00000349124 EML4Q9HC35 981 aaKnown RBP18.14■□□□□ 0.5
PTP4A3-202ENST00000349124 KLHL33A6NCF5 533 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 CPT1AP50416 773 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 MLLT6P55198 1093 aaPredicted RBP18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 CAPRIN1Q14444 709 aaKnown RBP18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 GRB7Q14451 532 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 UGT3A2Q3SY77 523 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 ZNF678Q5SXM1 525 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 GDF6Q6KF10 455 aaPredicted RBP18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 ANKRD23Q86SG2 305 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 B4GALNT2Q8NHY0 566 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 PTCD2Q8WV60 388 aaKnown RBP18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 RANBP9Q96S59 729 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 MRM3Q9HC36 420 aaKnown RBP18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 ABCC13Q9NSE7 274 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 TMEM181Q9P2C4 612 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 MAP10Q9P2G4 905 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 CNOT6Q9ULM6 557 aaKnown RBP18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 PDLIM1O00151 329 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 SOCS2O14508 198 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 TPST1O60507 370 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 IMPDH1P20839 514 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 ATP6V1B2P21281 511 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 ECT2LQ008S8 904 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 MAP7Q14244 749 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 ACAP2Q15057 778 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 AFMIDQ63HM1 303 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 OVOS1Q6IE37 1185 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 KLC3Q6P597 504 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 ZNF549Q6P9A3 640 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 LZTR1Q8N653 840 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 ZNF597Q96LX8 424 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 SLC25A51Q9H1U9 297 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 DNAJC15Q9Y5T4 150 aa18.14■□□□□ 0.49
PTP4A3-202ENST00000349124 TNFRSF10BO14763 440 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 FGF10O15520 208 aaPredicted RBP18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 RBP1P09455 135 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 CD52P31358 61 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 PSMD8P48556 350 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 MAP2K5Q13163 448 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 DDR2Q16832 855 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 BRMS1LQ5PSV4 323 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 METTL23Q86XA0 190 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 NUP93Q8N1F7 819 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 PGBD5Q8N414 524 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 STON2Q8WXE9 905 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 IMP4Q96G21 291 aaKnown RBP18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 OLAHQ9NV23 265 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 PTTG2Q9NZH5 202 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 SARDHQ9UL12 918 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 TCRBV3S1A0A5B6 114 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 SAC3D1A6NKF1 404 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 NR5A2O00482 541 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 GPX3P22352 226 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 APLP1P51693 650 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 CLCN5P51795 746 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 KPNA2P52292 529 aaKnown RBP18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 PRAMEP78395 509 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 TIAL1Q01085 375 aaKnown RBP eCLIP18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 KIF19Q2TAC6 998 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 SIRPB2Q5JXA9 342 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 TSPAN14Q8NG11 270 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 C19orf60Q96EN9 201 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 ZFRQ96KR1 1074 aaKnown RBP18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 PRKD2Q9BZL6 878 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 SMOC2Q9H3U7 446 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 TBC1D13Q9NVG8 400 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 POLR3BQ9NW08 1133 aaPredicted RBP18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 UXTQ9UBK9 157 aaPredicted RBP18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 AURKCQ9UQB9 309 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 ARL5AQ9Y689 179 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 CEPT1Q9Y6K0 416 aa18.13■□□□□ 0.49
PTP4A3-202ENST00000349124 hCG_2014768A0A024R1R8 64 aa18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 UBXN8O00124 270 aa18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 GNAO1P09471 354 aa18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 CYP2C18P33260 490 aa18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 PABPC1LQ4VXU2 614 aaKnown RBP18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 MORN1Q5T089 497 aa18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 TIGD7Q6NT04 549 aaPredicted RBP18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 ZBTB49Q6ZSB9 765 aa18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 KIAA0408Q6ZU52 694 aa18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 SPPL2CQ8IUH8 684 aa18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 CCT7Q99832 543 aa18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 SLC25A23Q9BV35 468 aa18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 BTRCQ9Y297 605 aa18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 ACTL7AQ9Y615 435 aa18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 M0QZ92 97 aa18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 HNRNPRO43390 633 aaKnown RBP18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 AKAP10O43572 662 aa18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 CDK14O94921 469 aa18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 SLC7A1P30825 629 aa18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 PRKCQQ04759 706 aa18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 SEMA3AQ14563 771 aa18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 PFKFB4Q16877 469 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms