RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 MRGBPQ9NV56 204 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 NFKBIL1Q9UBC1 381 aaPredicted RBP7.39□□□□□ -1.23
ZNF540-202ENST00000343599 GTF3C4Q9UKN8 822 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 HCN2Q9UL51 889 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 PCDHGA6Q9Y5G7 932 aa7.39□□□□□ -1.23
ZNF540-202ENST00000343599 A6NCN8 305 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 NOTOA8MTQ0 251 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 ADAMTS3O15072 1205 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 POLR2DO15514 142 aaKnown RBP7.38□□□□□ -1.23
ZNF540-202ENST00000343599 CHMP2AO43633 222 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 KCNJ13O60928 360 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 GSRP00390 522 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 ASS1P00966 412 aaKnown RBP7.38□□□□□ -1.23
ZNF540-202ENST00000343599 ATP5BP06576 529 aaKnown RBP7.38□□□□□ -1.23
ZNF540-202ENST00000343599 ANKRD34CP0C6C1 535 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 ZNF12P17014 697 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 MAN1A1P33908 653 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 RPS14P62263 151 aaKnown RBP7.38□□□□□ -1.23
ZNF540-202ENST00000343599 WASHC5Q12768 1159 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 PTK2BQ14289 1009 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 CYTH1Q15438 398 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 RFWD3Q6PCD5 774 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 FAM47EQ6ZV65 393 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 GRAMD1CQ8IYS0 662 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 CHPFQ8IZ52 775 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 ZNF843Q8N446 348 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 B3GALNT2Q8NCR0 500 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 DUSP16Q9BY84 665 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 CHRNA10Q9GZZ6 450 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 RAB33BQ9H082 229 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 PLK2Q9NYY3 685 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 SATB2Q9UPW6 733 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 DOCK4Q8N1I0 1966 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 ARHGAP10A1A4S6 786 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 RGS16O15492 202 aaPredicted RBP7.38□□□□□ -1.23
ZNF540-202ENST00000343599 CNOT3O75175 753 aaKnown RBP7.38□□□□□ -1.23
ZNF540-202ENST00000343599 TRMUO75648 421 aaKnown RBP7.38□□□□□ -1.23
ZNF540-202ENST00000343599 AGR2O95994 175 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 HOXB2P14652 356 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 DGKGP49619 791 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 IFI35P80217 286 aaPredicted RBP7.38□□□□□ -1.23
ZNF540-202ENST00000343599 ZACNQ401N2 412 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 SETMARQ53H47 684 aaPredicted RBP7.38□□□□□ -1.23
ZNF540-202ENST00000343599 DCAF6Q58WW2 860 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 TTC23LQ6PF05 361 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 TMEM92Q6UXU6 159 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 IZUMO2Q6UXV1 221 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 TAOK1Q7L7X3 1001 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 LRRTM3Q86VH5 581 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 ATCAYQ86WG3 371 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 VSIG1Q86XK7 387 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 PLPP7Q8NBV4 271 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 MYLPFQ96A32 169 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 SNF8Q96H20 258 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 NOX5Q96PH1 765 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 CTRCQ99895 268 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 POLR1BQ9H9Y6 1135 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 NLRC4Q9NPP4 1024 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 CRTAC1Q9NQ79 661 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 ABCC13Q9NSE7 274 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 KLHL3Q9UH77 587 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 CYTH4Q9UIA0 394 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 KLK13Q9UKR3 277 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 STRIP2Q9ULQ0 834 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 NPHP3-ACAD11A0A0J9YXS1 232 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 SMIM23A6NLE4 172 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 WASH4PA8MWX3 477 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 A8MXQ7 604 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 GPR89AB7ZAQ6 455 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 H3BM21 787 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 RHOBTB3O94955 611 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 GPR89BP0CG08 455 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 CXCL8P10145 99 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 FOSL1P15407 271 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 GJA1P17302 382 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 VIPR2P41587 438 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 GSSP48637 474 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 EPHA4P54764 986 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 SF3A2Q15428 464 aaKnown RBP7.38□□□□□ -1.23
ZNF540-202ENST00000343599 PHKG1Q16816 387 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 GRAMD1BQ3KR37 738 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 FIGNQ5HY92 759 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 NIPAL1Q6NVV3 410 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 SV2BQ7L1I2 683 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 SCARF2Q96GP6 870 aaPredicted RBP7.38□□□□□ -1.23
ZNF540-202ENST00000343599 TMEM74Q96NL1 305 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 ELF4Q99607 663 aaPredicted RBP7.38□□□□□ -1.23
ZNF540-202ENST00000343599 REEP2Q9BRK0 252 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 AASDHPPTQ9NRN7 309 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 PKD2L1Q9P0L9 805 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 LUZP4Q9P127 313 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 FBXO2Q9UK22 296 aaPredicted RBP7.38□□□□□ -1.23
ZNF540-202ENST00000343599 FAF1Q9UNN5 650 aaPredicted RBP7.38□□□□□ -1.23
ZNF540-202ENST00000343599 CTNND2Q9UQB3 1225 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 CHKBQ9Y259 395 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 UTP11Q9Y3A2 253 aaKnown RBP7.38□□□□□ -1.23
ZNF540-202ENST00000343599 STON1Q9Y6Q2 735 aa7.38□□□□□ -1.23
ZNF540-202ENST00000343599 GTPBP10A4D1E9 387 aaKnown RBP7.37□□□□□ -1.23
ZNF540-202ENST00000343599 DCTN3O75935 186 aa7.37□□□□□ -1.23
ZNF540-202ENST00000343599 PRKACBP22694 351 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms