RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 TAAR2Q9P1P5 351 aa17.76■□□□□ 0.43
MUC1-204ENST00000343256 KCTD3Q9Y597 815 aa17.76■□□□□ 0.43
MUC1-204ENST00000343256 TNRC6AQ8NDV7 1962 aaKnown RBP17.76■□□□□ 0.43
MUC1-204ENST00000343256 C2CD3Q4AC94 2353 aa17.75■□□□□ 0.43
MUC1-204ENST00000343256 PRSS38A1L453 326 aa17.75■□□□□ 0.43
MUC1-204ENST00000343256 TNFRSF10CO14798 259 aa17.75■□□□□ 0.43
MUC1-204ENST00000343256 ZW10O43264 779 aa17.75■□□□□ 0.43
MUC1-204ENST00000343256 FURINP09958 794 aa17.75■□□□□ 0.43
MUC1-204ENST00000343256 BMP6P22004 513 aa17.75■□□□□ 0.43
MUC1-204ENST00000343256 FLT3P36888 993 aa17.75■□□□□ 0.43
MUC1-204ENST00000343256 COPB1P53618 953 aaKnown RBP17.75■□□□□ 0.43
MUC1-204ENST00000343256 APBA1Q02410 837 aa17.75■□□□□ 0.43
MUC1-204ENST00000343256 RAB6CQ53S08 254 aa17.75■□□□□ 0.43
MUC1-204ENST00000343256 ACBD5Q5T8D3 534 aaPredicted RBP17.75■□□□□ 0.43
MUC1-204ENST00000343256 SLC30A9Q6PML9 568 aa17.75■□□□□ 0.43
MUC1-204ENST00000343256 MAMDC2Q7Z304 686 aaPredicted RBP17.75■□□□□ 0.43
MUC1-204ENST00000343256 TMEM135Q86UB9 458 aa17.75■□□□□ 0.43
MUC1-204ENST00000343256 ZSWIM9Q86XI8 627 aa17.75■□□□□ 0.43
MUC1-204ENST00000343256 ZNF761Q86XN6 746 aaPredicted RBP17.75■□□□□ 0.43
MUC1-204ENST00000343256 TICAM1Q8IUC6 712 aa17.75■□□□□ 0.43
MUC1-204ENST00000343256 CFAP57Q96MR6 1250 aa17.75■□□□□ 0.43
MUC1-204ENST00000343256 SCAND2PQ9GZW5 306 aaPredicted RBP17.75■□□□□ 0.43
MUC1-204ENST00000343256 KLC2Q9H0B6 622 aa17.75■□□□□ 0.43
MUC1-204ENST00000343256 RAB6CQ9H0N0 254 aa17.75■□□□□ 0.43
MUC1-204ENST00000343256 MAGEH1Q9H213 219 aa17.75■□□□□ 0.43
MUC1-204ENST00000343256 CUEDC1Q9NWM3 386 aaPredicted RBP17.75■□□□□ 0.43
MUC1-204ENST00000343256 TLK1Q9UKI8 766 aa17.75■□□□□ 0.43
MUC1-204ENST00000343256 MFHAS1Q9Y4C4 1052 aa17.75■□□□□ 0.43
MUC1-204ENST00000343256 CELSR2Q9HCU4 2923 aa17.75■□□□□ 0.43
MUC1-204ENST00000343256 SHANK1Q9Y566 2161 aa17.74■□□□□ 0.43
MUC1-204ENST00000343256 TEX33O43247 280 aa17.74■□□□□ 0.43
MUC1-204ENST00000343256 KDELR3O43731 214 aa17.74■□□□□ 0.43
MUC1-204ENST00000343256 RAMP2O60895 175 aa17.74■□□□□ 0.43
MUC1-204ENST00000343256 RECQL5O94762 991 aaPredicted RBP17.74■□□□□ 0.43
MUC1-204ENST00000343256 STK17BO94768 372 aa17.74■□□□□ 0.43
MUC1-204ENST00000343256 KELP23276 732 aa17.74■□□□□ 0.43
MUC1-204ENST00000343256 MMP12P39900 470 aa17.74■□□□□ 0.43
MUC1-204ENST00000343256 GPR3P46089 330 aa17.74■□□□□ 0.43
MUC1-204ENST00000343256 MAPKAPK2P49137 400 aa17.74■□□□□ 0.43
MUC1-204ENST00000343256 PPM1FP49593 454 aaPredicted RBP17.74■□□□□ 0.43
MUC1-204ENST00000343256 RIPPLY3P57055 190 aa17.74■□□□□ 0.43
MUC1-204ENST00000343256 ERV3-1Q14264 604 aa17.74■□□□□ 0.43
MUC1-204ENST00000343256 EIF2S3LQ2VIR3 472 aaKnown RBP17.74■□□□□ 0.43
MUC1-204ENST00000343256 FAM102AQ5T9C2 384 aaPredicted RBP17.74■□□□□ 0.43
MUC1-204ENST00000343256 ERAP2Q6P179 960 aa17.74■□□□□ 0.43
MUC1-204ENST00000343256 TMEM71Q6P5X7 295 aa17.74■□□□□ 0.43
MUC1-204ENST00000343256 NAGSQ8N159 534 aa17.74■□□□□ 0.43
MUC1-204ENST00000343256 PTCD2Q8WV60 388 aaKnown RBP17.74■□□□□ 0.43
MUC1-204ENST00000343256 TEFMQ96QE5 360 aaKnown RBP17.74■□□□□ 0.43
MUC1-204ENST00000343256 GSDMCQ9BYG8 508 aa17.74■□□□□ 0.43
MUC1-204ENST00000343256 CRYBG3Q68DQ2 2970 aa17.73■□□□□ 0.43
MUC1-204ENST00000343256 FAM72CH0Y354 149 aa17.73■□□□□ 0.43
MUC1-204ENST00000343256 FUCA1P04066 466 aa17.73■□□□□ 0.43
MUC1-204ENST00000343256 RHOQP17081 205 aa17.73■□□□□ 0.43
MUC1-204ENST00000343256 STAT1P42224 750 aa17.73■□□□□ 0.43
MUC1-204ENST00000343256 SUOXP51687 545 aa17.73■□□□□ 0.43
MUC1-204ENST00000343256 SNX16P57768 344 aa17.73■□□□□ 0.43
MUC1-204ENST00000343256 MC2RQ01718 297 aa17.73■□□□□ 0.43
MUC1-204ENST00000343256 CRTC2Q53ET0 693 aaPredicted RBP17.73■□□□□ 0.43
MUC1-204ENST00000343256 C2CD6Q53TS8 623 aa17.73■□□□□ 0.43
MUC1-204ENST00000343256 FAM72AQ5TYM5 149 aa17.73■□□□□ 0.43
MUC1-204ENST00000343256 MANEALQ5VSG8 457 aa17.73■□□□□ 0.43
MUC1-204ENST00000343256 ISM2Q6H9L7 571 aa17.73■□□□□ 0.43
MUC1-204ENST00000343256 FAM72DQ6L9T8 149 aa17.73■□□□□ 0.43
MUC1-204ENST00000343256 PHLDB2Q86SQ0 1253 aa17.73■□□□□ 0.43
MUC1-204ENST00000343256 FAM72BQ86X60 149 aa17.73■□□□□ 0.43
MUC1-204ENST00000343256 CRACR2AQ9BSW2 395 aa17.73■□□□□ 0.43
MUC1-204ENST00000343256 SUV39H2Q9H5I1 410 aa17.73■□□□□ 0.43
MUC1-204ENST00000343256 WDR26Q9H7D7 661 aa17.73■□□□□ 0.43
MUC1-204ENST00000343256 TMEM248Q9NWD8 314 aa17.73■□□□□ 0.43
MUC1-204ENST00000343256 LHX3Q9UBR4 397 aa17.73■□□□□ 0.43
MUC1-204ENST00000343256 OR12D3Q9UGF7 316 aa17.73■□□□□ 0.43
MUC1-204ENST00000343256 ATP8A1Q9Y2Q0 1164 aa17.73■□□□□ 0.43
MUC1-204ENST00000343256 ST14Q9Y5Y6 855 aa17.73■□□□□ 0.43
MUC1-204ENST00000343256 ZNF106Q9H2Y7 1883 aaKnown RBP17.73■□□□□ 0.43
MUC1-204ENST00000343256 FBN2P35556 2912 aa17.72■□□□□ 0.43
MUC1-204ENST00000343256 TSPAN11A1L157 253 aa17.72■□□□□ 0.43
MUC1-204ENST00000343256 RFPL1O75677 317 aa17.72■□□□□ 0.43
MUC1-204ENST00000343256 CD44P16070 742 aaKnown RBP17.72■□□□□ 0.43
MUC1-204ENST00000343256 KRT9P35527 623 aa17.72■□□□□ 0.43
MUC1-204ENST00000343256 TRIM23P36406 574 aa17.72■□□□□ 0.43
MUC1-204ENST00000343256 STAT5AP42229 794 aa17.72■□□□□ 0.43
MUC1-204ENST00000343256 GNPDA1P46926 289 aa17.72■□□□□ 0.43
MUC1-204ENST00000343256 ILF3Q12906 894 aaKnown RBP eCLIP17.72■□□□□ 0.43
MUC1-204ENST00000343256 RALGDSQ12967 914 aa17.72■□□□□ 0.43
MUC1-204ENST00000343256 TSR1Q2NL82 804 aaKnown RBP17.72■□□□□ 0.43
MUC1-204ENST00000343256 CEACAM20Q6UY09 585 aa17.72■□□□□ 0.43
MUC1-204ENST00000343256 ENOSF1Q7L5Y1 443 aa17.72■□□□□ 0.43
MUC1-204ENST00000343256 BNIPLQ7Z465 357 aa17.72■□□□□ 0.43
MUC1-204ENST00000343256 ZDHHC17Q8IUH5 632 aa17.72■□□□□ 0.43
MUC1-204ENST00000343256 TRIM59Q8IWR1 403 aa17.72■□□□□ 0.43
MUC1-204ENST00000343256 NEU3Q9UQ49 428 aa17.72■□□□□ 0.43
MUC1-204ENST00000343256 TMEM184BQ9Y519 407 aaPredicted RBP17.72■□□□□ 0.43
MUC1-204ENST00000343256 RPS6KL1Q9Y6S9 549 aa17.72■□□□□ 0.43
MUC1-204ENST00000343256 HIVEP3Q5T1R4 2406 aa17.71■□□□□ 0.43
MUC1-204ENST00000343256 GOLGA8SH3BPF8 625 aa17.71■□□□□ 0.43
MUC1-204ENST00000343256 BUB1BO60566 1050 aaPredicted RBP17.71■□□□□ 0.43
MUC1-204ENST00000343256 DNAJB5O75953 348 aa17.71■□□□□ 0.43
MUC1-204ENST00000343256 DDAH2O95865 285 aa17.71■□□□□ 0.43
MUC1-204ENST00000343256 DLGAP3O95886 979 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms