RNA–Protein interactions for RNA: ENST00000342895.7

LRRC39-201, Transcript of leucine rich repeat containing 39, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRC39, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-201ENST00000342895 ABCB1P08183 1280 aaPredicted RBP3.39□□□□□ -1.87
LRRC39-201ENST00000342895 ACTN1P12814 892 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 ATP1A3P13637 1013 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 IL6STP40189 918 aaPredicted RBP3.39□□□□□ -1.87
LRRC39-201ENST00000342895 CETN2P41208 172 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 CBX5P45973 191 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 WDR5P61964 334 aaKnown RBP3.39□□□□□ -1.87
LRRC39-201ENST00000342895 RPS13P62277 151 aaKnown RBP3.39□□□□□ -1.87
LRRC39-201ENST00000342895 POLR2GP62487 172 aaKnown RBP eCLIP3.39□□□□□ -1.87
LRRC39-201ENST00000342895 KDSRQ06136 332 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 NIPAL4Q0D2K0 466 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 C17orf67Q0P5P2 114 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 DHX34Q14147 1143 aaKnown RBP3.39□□□□□ -1.87
LRRC39-201ENST00000342895 BCL2A1Q16548 175 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 CCDC40Q4G0X9 1142 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 FAM209BQ5JX69 171 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 C10orf25Q5T742 122 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 RAP1GAP2Q684P5 730 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 GPR139Q6DWJ6 353 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 TMEM154Q6P9G4 183 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 ZYG11AQ6WRX3 759 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 NUP93Q8N1F7 819 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 AVL9Q8NBF6 648 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 PCYOX1LQ8NBM8 494 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 DEPTORQ8TB45 409 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 LZICQ8WZA0 190 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 KIFAP3Q92845 792 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 PEX13Q92968 403 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 LRRC59Q96AG4 307 aaKnown RBP3.39□□□□□ -1.87
LRRC39-201ENST00000342895 SPATA17Q96L03 361 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 ZNF48Q96MX3 618 aaPredicted RBP3.39□□□□□ -1.87
LRRC39-201ENST00000342895 YME1L1Q96TA2 773 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 HNRNPABQ99729 332 aaKnown RBP3.39□□□□□ -1.87
LRRC39-201ENST00000342895 SLF1Q9BQI6 1058 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 LLPHQ9BRT6 129 aaKnown RBP3.39□□□□□ -1.87
LRRC39-201ENST00000342895 FAM129AQ9BZQ8 928 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 WDR12Q9GZL7 423 aaKnown RBP3.39□□□□□ -1.87
LRRC39-201ENST00000342895 NYXQ9GZU5 481 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.39□□□□□ -1.87
LRRC39-201ENST00000342895 ADNPQ9H2P0 1102 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 DENND2DQ9H6A0 471 aaPredicted RBP3.39□□□□□ -1.87
LRRC39-201ENST00000342895 PANK3Q9H999 370 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 UCK1Q9HA47 277 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 NECTIN3Q9NQS3 549 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 ABHD10Q9NUJ1 306 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 EHD2Q9NZN4 543 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 HMGXB4Q9UGU5 601 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 EXOC7Q9UPT5 735 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 MAN2B2Q9Y2E5 1009 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 BZW2Q9Y6E2 419 aaKnown RBP3.39□□□□□ -1.87
LRRC39-201ENST00000342895 SIRT4Q9Y6E7 314 aaPredicted RBP3.39□□□□□ -1.87
LRRC39-201ENST00000342895 AP1M2Q9Y6Q5 423 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 ROCK2O75116 1388 aaKnown RBP3.39□□□□□ -1.87
LRRC39-201ENST00000342895 NCAPD3P42695 1498 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 FLT1P17948 1338 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 GOLGA6L7A0A1B0GV03 622 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 RGSL1A5PLK6 1076 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 ACOD1A6NK06 481 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 E9PMD0 336 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 GOLGA8MH3BSY2 632 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 DHHO43323 396 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 TLR2O60603 784 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 VIPP01282 170 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 TNFSF4P23510 183 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 GDI1P31150 447 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 OR1G1P47890 313 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 SSTP61278 116 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 ROR2Q01974 943 aaKnown RBP3.39□□□□□ -1.87
LRRC39-201ENST00000342895 RNASELQ05823 741 aaKnown RBP3.39□□□□□ -1.87
LRRC39-201ENST00000342895 CBX3Q13185 183 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 ITGA7Q13683 1181 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 DOC2AQ14183 400 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 RFTN1Q14699 578 aaPredicted RBP3.39□□□□□ -1.87
LRRC39-201ENST00000342895 SPCS2Q15005 226 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 STK38Q15208 465 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 MOGQ16653 247 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 SLC35G1Q2M3R5 365 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 XKR3Q5GH77 459 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 STXBP5Q5T5C0 1151 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 IZUMO3Q5VZ72 239 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 ARL6IP4Q66PJ3 421 aaKnown RBP3.39□□□□□ -1.87
LRRC39-201ENST00000342895 OLFM4Q6UX06 510 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 TMTC1Q8IUR5 882 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 SLC22A9Q8IVM8 553 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 CADM3Q8N126 398 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 OR2C3Q8N628 320 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 ANKRD52Q8NB46 1076 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 OR56B2PQ8NGI1 322 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 GTF3C6Q969F1 213 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 TMIGD2Q96BF3 282 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 TUBGCP3Q96CW5 907 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 HDAC11Q96DB2 347 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 C11orf24Q96F05 449 aaPredicted RBP3.39□□□□□ -1.87
LRRC39-201ENST00000342895 PRR11Q96HE9 360 aaPredicted RBP3.39□□□□□ -1.87
LRRC39-201ENST00000342895 RIPOR3Q96MK2 946 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 ALS2CR12Q96Q35 445 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 TREX2Q9BQ50 279 aaPredicted RBP3.39□□□□□ -1.87
LRRC39-201ENST00000342895 NTMT1Q9BV86 223 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 ACAT2Q9BWD1 397 aa3.39□□□□□ -1.87
LRRC39-201ENST00000342895 PDE7BQ9NP56 450 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms