RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 SCN11AQ9UI33 1791 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 OR6C75A6NL08 312 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 AMHP03971 560 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 DLDP09622 509 aaKnown RBP7.21□□□□□ -1.26
VCAN-202ENST00000342785 ALOX15P16050 662 aaPredicted RBP7.21□□□□□ -1.26
VCAN-202ENST00000342785 HDCP19113 662 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 GSSP48637 474 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 FLT3LGP49771 235 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 INHBEP58166 350 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 RPL38P63173 70 aaKnown RBP7.21□□□□□ -1.26
VCAN-202ENST00000342785 DUSP4Q13115 394 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 STARD3Q14849 445 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 MTX3Q5HYI7 312 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 ANKRD23Q86SG2 305 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 RTL3Q8N8U3 475 aaKnown RBP7.21□□□□□ -1.26
VCAN-202ENST00000342785 TERB1Q8NA31 727 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 PPP3R2Q96LZ3 170 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 PDLIM7Q9NR12 457 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 GMIPQ9P107 970 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 CYTH4Q9UIA0 394 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 CNTRLQ7Z7A1 2325 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 PRMT5O14744 637 aaPredicted RBP7.21□□□□□ -1.26
VCAN-202ENST00000342785 OR56A5P0C7T3 313 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 DEFA1P59665 94 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 DEFA3P59666 94 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 FKBP1BP68106 108 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 BTG3Q14201 252 aaPredicted RBP7.21□□□□□ -1.26
VCAN-202ENST00000342785 TRIM25Q14258 630 aaKnown RBP7.21□□□□□ -1.26
VCAN-202ENST00000342785 VPS26BQ4G0F5 336 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 ARHGAP15Q53QZ3 475 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 TPGS1Q6ZTW0 290 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 TMEM26Q6ZUK4 368 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 ZCCHC7Q8N3Z6 543 aaKnown RBP7.21□□□□□ -1.26
VCAN-202ENST00000342785 EMID1Q96A84 441 aaPredicted RBP7.21□□□□□ -1.26
VCAN-202ENST00000342785 LINGO1Q96FE5 620 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 BTBD9Q96Q07 612 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 OR52B2Q96RD2 323 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 NFKBIZQ9BYH8 718 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 NENFQ9UMX5 172 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 ATP11BQ9Y2G3 1177 aa7.21□□□□□ -1.26
VCAN-202ENST00000342785 SLC22A3O75751 556 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 NTRK1P04629 796 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 CYP2A7P20853 494 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 PBLDP30039 288 aaPredicted RBP7.2□□□□□ -1.26
VCAN-202ENST00000342785 PRDX6P30041 224 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 RAP1GDS1P52306 607 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 TRIM60Q495X7 471 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 NUDT18Q6ZVK8 323 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 TREML1Q86YW5 311 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 UTP15Q8TED0 518 aaKnown RBP7.2□□□□□ -1.26
VCAN-202ENST00000342785 FCRL5Q96RD9 977 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 HOPXQ9BPY8 73 aaPredicted RBP7.2□□□□□ -1.26
VCAN-202ENST00000342785 SLC39A8Q9C0K1 460 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 IRAK2O43187 625 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 SLC7A4O43246 635 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 RFPL1O75677 317 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 PRKAR2AP13861 404 aaKnown RBP7.2□□□□□ -1.26
VCAN-202ENST00000342785 OR1D2P34982 312 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 POLD2P49005 469 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 ZNF252P-AS1Q0IIN9 211 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 GCNT7Q6ZNI0 430 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 ANKS3Q6ZW76 656 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 ITIH5Q86UX2 942 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 TBC1D19Q8N5T2 526 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 NPY6RQ99463 290 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 FTHL17Q9BXU8 183 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 SLC25A13Q9UJS0 675 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 TMCC3Q9ULS5 477 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 ZBTB14O43829 449 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 HTR7P34969 479 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 NAA20P61599 178 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 MRPS15P82914 257 aaKnown RBP7.2□□□□□ -1.26
VCAN-202ENST00000342785 TNK2Q07912 1038 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 EPS8Q12929 822 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 OLIG2Q13516 323 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 CAMK2GQ13555 558 aaPredicted RBP7.2□□□□□ -1.26
VCAN-202ENST00000342785 SLC9B1Q4ZJI4 515 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 C11orf96Q7Z7L8 435 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 C8orf59Q8N0T1 100 aaPredicted RBP7.2□□□□□ -1.26
VCAN-202ENST00000342785 SETD9Q8NE22 299 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 C19orf60Q96EN9 201 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 DGCR6LQ9BY27 220 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 RIBC2Q9H4K1 309 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 EBF3Q9H4W6 596 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 HPS4Q9NQG7 708 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 USE1Q9NZ43 259 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 SIRPGQ9P1W8 387 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 FAM149AA5PLN7 773 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 ARL5CA6NH57 179 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 NRP1O14786 923 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 RPP40O75818 363 aaKnown RBP7.2□□□□□ -1.26
VCAN-202ENST00000342785 WDR47O94967 919 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 OTCP00480 354 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 KRT8P05787 483 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 TYMPP19971 482 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 MC4RP32245 332 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 GPC1P35052 558 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 PBX3P40426 434 aa7.2□□□□□ -1.26
VCAN-202ENST00000342785 ADARP55265 1226 aaKnown RBP7.2□□□□□ -1.26
VCAN-202ENST00000342785 IRF9Q00978 393 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms