RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 FAM96AQ9H5X1 160 aa13.92□□□□□ -0.18
PMS1-201ENST00000342075 CD320Q9NPF0 282 aa13.92□□□□□ -0.18
PMS1-201ENST00000342075 SERGEFQ9UGK8 458 aa13.92□□□□□ -0.18
PMS1-201ENST00000342075 SLC8A2Q9UPR5 921 aa13.92□□□□□ -0.18
PMS1-201ENST00000342075 ZNF711Q9Y462 761 aa13.92□□□□□ -0.18
PMS1-201ENST00000342075 EDDM13A0A1B0GTR0 161 aa13.92□□□□□ -0.18
PMS1-201ENST00000342075 SOCS5O75159 536 aa13.92□□□□□ -0.18
PMS1-201ENST00000342075 ZNF140P52738 457 aaPredicted RBP13.92□□□□□ -0.18
PMS1-201ENST00000342075 MPP1Q00013 466 aa13.92□□□□□ -0.18
PMS1-201ENST00000342075 TTC30BQ8N4P2 665 aa13.92□□□□□ -0.18
PMS1-201ENST00000342075 RPLP0P6Q8NHW5 317 aa13.92□□□□□ -0.18
PMS1-201ENST00000342075 FAM3CQ92520 227 aa13.92□□□□□ -0.18
PMS1-201ENST00000342075 KLF6Q99612 283 aaPredicted RBP13.92□□□□□ -0.18
PMS1-201ENST00000342075 B4GALT6Q9UBX8 382 aa13.92□□□□□ -0.18
PMS1-201ENST00000342075 CD84Q9UIB8 345 aa13.92□□□□□ -0.18
PMS1-201ENST00000342075 FKBPLQ9UIM3 349 aa13.92□□□□□ -0.18
PMS1-201ENST00000342075 ARIH1Q9Y4X5 557 aaPredicted RBP13.92□□□□□ -0.18
PMS1-201ENST00000342075 TTC28Q96AY4 2481 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 KRBA1A5PL33 1030 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 FAM159BA6NKW6 160 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 C16orf96A6NNT2 1141 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 TIMM44O43615 452 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 ALDH1A2O94788 518 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 ALADP13716 330 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 GRIA4P48058 902 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 SEMA3AQ14563 771 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 SLC14A2Q15849 920 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 CDKN3Q16667 212 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 UGP2Q16851 508 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 SPANXN3Q5MJ09 141 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 LRRC66Q68CR7 880 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 CRTC1Q6UUV9 634 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 LRIG3Q6UXM1 1119 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 OR6P1Q8NGX9 317 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 CYTH2Q99418 400 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 ABCG8Q9H221 673 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 TMBIM4Q9HC24 238 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 EURLQ9NYK6 297 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 PRKAG3Q9UGI9 489 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 PPM1HQ9ULR3 514 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 STARD13Q9Y3M8 1113 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 SPINT1O43278 529 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 TIMP2P16035 220 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 STX2P32856 288 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 TMEM31Q5JXX7 168 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 TTC7BQ86TV6 843 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 ADHFE1Q8IWW8 467 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 TUBGCP5Q96RT8 1024 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 GPR63Q9BZJ6 419 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 PCDH12Q9NPG4 1184 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 ZFATQ9P243 1243 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 VPS18Q9P253 973 aa13.91□□□□□ -0.18
PMS1-201ENST00000342075 CXorf51AA0A1B0GTR3 108 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 A0A1W2PPM1 405 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 HMX2A2RU54 273 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 CCDC162PA2VCL2 907 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 CAPN8A6NHC0 703 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 MYZAPP0CAP1 466 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 MAPK8P45983 427 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 RAD51Q06609 339 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 ELAVL3Q14576 367 aaKnown RBP13.9□□□□□ -0.18
PMS1-201ENST00000342075 STAT4Q14765 748 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 RALGPS1Q5JS13 557 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 DNASE1L2Q92874 299 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 WRAP53Q9BUR4 548 aaKnown RBP13.9□□□□□ -0.18
PMS1-201ENST00000342075 FOXQ1Q9C009 403 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 TRPV5Q9NQA5 729 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 NOVA2Q9UNW9 492 aaKnown RBP13.9□□□□□ -0.18
PMS1-201ENST00000342075 GON4LQ3T8J9 2241 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 GOLGA8RI6L899 631 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 MID1O15344 667 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 GOT2P00505 430 aaKnown RBP13.9□□□□□ -0.18
PMS1-201ENST00000342075 GABRB3P28472 473 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 SLC1A2P43004 574 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 GRSF1Q12849 480 aaKnown RBP eCLIP13.9□□□□□ -0.18
PMS1-201ENST00000342075 CCINQ13939 588 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 ZNF805Q5CZA5 627 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 TEDDM1Q5T9Z0 273 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 ZNF470Q6ECI4 717 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 KDM7AQ6ZMT4 941 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 OR8D1Q8WZ84 308 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 DUSP12Q9UNI6 340 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 COQ6Q9Y2Z9 468 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 A0A1W2PQF6 199 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 ATP8B1O43520 1251 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 CA4P22748 312 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 OAS2P29728 719 aaKnown RBP13.9□□□□□ -0.18
PMS1-201ENST00000342075 LRRC6Q86X45 466 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 SLC44A1Q8WWI5 657 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 ZNF641Q96N77 438 aaPredicted RBP13.9□□□□□ -0.18
PMS1-201ENST00000342075 RANBP9Q96S59 729 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 THEGQ9P2T0 379 aa13.9□□□□□ -0.18
PMS1-201ENST00000342075 SPEGQ15772 3267 aa13.9□□□□□ -0.19
PMS1-201ENST00000342075 TOP3BO95985 862 aaKnown RBP13.89□□□□□ -0.19
PMS1-201ENST00000342075 TNFRSF4P43489 277 aa13.89□□□□□ -0.19
PMS1-201ENST00000342075 COPAP53621 1224 aa13.89□□□□□ -0.19
PMS1-201ENST00000342075 PTSQ03393 145 aa13.89□□□□□ -0.19
PMS1-201ENST00000342075 MGAT5Q09328 741 aa13.89□□□□□ -0.19
PMS1-201ENST00000342075 ENPP2Q13822 863 aa13.89□□□□□ -0.19
PMS1-201ENST00000342075 TAF1AQ15573 450 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms