RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 FSCN1Q16658 493 aaKnown RBP9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 MEP1AQ16819 746 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 EFL1Q7Z2Z2 1120 aaKnown RBP9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 TFAP2DQ7Z6R9 452 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 RHOT1Q8IXI2 618 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 ZNF366Q8N895 744 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 AKAP1Q92667 903 aaKnown RBP eCLIP9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 TRMT61AQ96FX7 289 aaKnown RBP9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 IARS2Q9NSE4 1012 aaKnown RBP9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 EIF3KQ9UBQ5 218 aaKnown RBP9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 SLC23A1Q9UHI7 598 aa9.69□□□□□ -0.86
PTCHD4-201ENST00000339488 TCAF2A6NFQ2 919 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 PLA2G6O60733 806 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 CYP7B1O75881 506 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 FGF18O76093 207 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 C1QAP02745 245 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 RALBP11234 206 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 GLDCP23378 1020 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 GGT5P36269 586 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 ARCN1P48444 511 aaKnown RBP9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 PGGT1BP53609 377 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 ERVK-21P61565 698 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 SP2Q02086 613 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 GALNT3Q14435 633 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 ACOX1Q15067 660 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 TMEM81Q6P7N7 255 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 NLRP8Q86W28 1048 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 UBE2J2Q8N2K1 259 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 AADATQ8N5Z0 425 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 MFSD2AQ8NA29 543 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 ST13P5Q8NFI4 369 aaPredicted RBP9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 UBASH3BQ8TF42 649 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 SLITRK1Q96PX8 696 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 TEX13BQ9BXU2 312 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 ADAMTS10Q9H324 1103 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 SLC52A2Q9HAB3 445 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 PLAC1Q9HBJ0 212 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 NFIBO00712 420 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 TPP1O14773 563 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 USP2O75604 605 aaPredicted RBP9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 PPM1BO75688 479 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 RGS20O76081 388 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 PTTG1O95997 202 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 UQCRFS1P1P0C7P4 283 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 INCA1Q0VD86 236 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 TCEAL1Q15170 157 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 PAMR1Q6UXH9 720 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 ZNF704Q6ZNC4 412 aaPredicted RBP9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 FAM35AQ86V20 835 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 TTLL6Q8N841 843 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 ACTL9Q8TC94 416 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 URGCPQ8TCY9 931 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 PBXIP1Q96AQ6 731 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 C12orf57Q99622 126 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 SLIRPQ9GZT3 109 aaKnown RBP9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 SMOC2Q9H3U7 446 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 INTS7Q9NVH2 962 aaKnown RBP9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 PIH1D1Q9NWS0 290 aaKnown RBP9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 SMPD3Q9NY59 655 aaPredicted RBP9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 ADGRE2Q9UHX3 823 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 USP21Q9UK80 565 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 ZNF652Q9Y2D9 606 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 PCDHGB3Q9Y5G1 929 aa9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 PCDHGA9Q9Y5G4 932 aaKnown RBP9.68□□□□□ -0.86
PTCHD4-201ENST00000339488 SHANK3Q9BYB0 1731 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 A0A0U1RQS6 177 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 TCRBV3S1A0A5B6 114 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 TRPC5OSA6NMA1 111 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 TMEM233B4DJY2 109 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 ZBTB5O15062 677 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 PAPSS1O43252 624 aaPredicted RBP9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 PROSCO94903 275 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 EGFRP00533 1210 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 KCNA5P22460 613 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 CRHR1P34998 444 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 DDOSTP39656 456 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 SRP54P61011 504 aaKnown RBP9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 YBX1P67809 324 aaKnown RBP9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 TFDP2Q14188 446 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 POU4F3Q15319 338 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 STXBP2Q15833 593 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 ACAD10Q6JQN1 1059 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 RSBN1LQ6PCB5 846 aaPredicted RBP9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 SLFN12Q8IYM2 578 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 MICU2Q8IYU8 434 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 RP9Q8TA86 221 aaKnown RBP9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 DYNC2LI1Q8TCX1 351 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 CDKL2Q92772 493 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 CDCA5Q96FF9 252 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 EFCAB1Q9HAE3 211 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 RAB20Q9NX57 234 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 ERVK13-1Q9NX77 482 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 SYBUQ9NX95 663 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 PRKAG2Q9UGJ0 569 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 JAG2Q9Y219 1238 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 HSPB11Q9Y547 144 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 HEATR9A2RTY3 570 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 C9JVG2 144 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 WWP2O00308 870 aa9.67□□□□□ -0.86
PTCHD4-201ENST00000339488 POLRMTO00411 1230 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms