RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 TTC1Q99614 292 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 PKMYT1Q99640 499 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 YIPF3Q9GZM5 350 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 SMOC2Q9H3U7 446 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 WDCPQ9H6R7 721 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 GLOD4Q9HC38 313 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 DMAP1Q9NPF5 467 aaPredicted RBP10.85□□□□□ -0.67
RTN3-201ENST00000338850 ANLNQ9NQW6 1124 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 PAPOLBQ9NRJ5 636 aaKnown RBP10.85□□□□□ -0.67
RTN3-201ENST00000338850 VPS45Q9NRW7 570 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 CLIC5Q9NZA1 410 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 NCKIPSDQ9NZQ3 722 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 KLK14Q9P0G3 267 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 SUCOQ9UBS9 1254 aaKnown RBP10.85□□□□□ -0.67
RTN3-201ENST00000338850 OR12D3Q9UGF7 316 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 ACOT9Q9Y305 439 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 COMMD3-BMI1R4GMX3 469 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 CACNA1HO95180 2353 aa10.85□□□□□ -0.67
RTN3-201ENST00000338850 PRSS51A0A1B0GVH4 220 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 ATP9BO43861 1147 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 BCAS2O75934 225 aaPredicted RBP10.84□□□□□ -0.67
RTN3-201ENST00000338850 PIGNO95427 931 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 PDGFBP01127 241 aaPredicted RBP10.84□□□□□ -0.67
RTN3-201ENST00000338850 THP07101 528 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 ASGR2P07307 311 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 ADH1AP07327 375 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 ODC1P11926 461 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 NCAM1P13591 858 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 STMN1P16949 149 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 TFEBP19484 476 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 NCF2P19878 526 aaPredicted RBP10.84□□□□□ -0.67
RTN3-201ENST00000338850 TYMPP19971 482 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 ATP5F1P24539 256 aaPredicted RBP10.84□□□□□ -0.67
RTN3-201ENST00000338850 GRIA4P48058 902 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 CD151P48509 253 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 MAP3K7CLP57077 242 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 NFKB2Q00653 900 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 TRAP1Q12931 704 aaKnown RBP10.84□□□□□ -0.67
RTN3-201ENST00000338850 MTA1Q13330 715 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 CYLC2Q14093 348 aaPredicted RBP10.84□□□□□ -0.67
RTN3-201ENST00000338850 ADRM1Q16186 407 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 ZNF423Q2M1K9 1284 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 LSM12Q3MHD2 195 aaKnown RBP10.84□□□□□ -0.67
RTN3-201ENST00000338850 LIN52Q52LA3 116 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 RALGPS1Q5JS13 557 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 FUT10Q6P4F1 479 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 TAC4Q86UU9 113 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 ARHGAP12Q8IWW6 846 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 AHI1Q8N157 1196 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 PELI3Q8N2H9 469 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 ATPAF2Q8N5M1 289 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 POU5F2Q8N7G0 328 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 GOLM1Q8NBJ4 401 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 SLC26A7Q8TE54 656 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 DQX1Q8TE96 717 aaKnown RBP10.84□□□□□ -0.67
RTN3-201ENST00000338850 LRRN4Q8WUT4 740 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 DTNBP1Q96EV8 351 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 TSPAN17Q96FV3 270 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 LENG8Q96PV6 779 aaPredicted RBP10.84□□□□□ -0.67
RTN3-201ENST00000338850 AGAP2Q99490 1192 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 GPR62Q9BZJ7 368 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 TKTL2Q9H0I9 626 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 TASP1Q9H6P5 420 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 EFCAB1Q9HAE3 211 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 ATP13A1Q9HD20 1204 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 VCX3AQ9NNX9 186 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 MAN1C1Q9NR34 630 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 IARS2Q9NSE4 1012 aaKnown RBP10.84□□□□□ -0.67
RTN3-201ENST00000338850 LIMD1Q9UGP4 676 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 RIMKLBQ9ULI2 386 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 CHD5Q8TDI0 1954 aa10.84□□□□□ -0.67
RTN3-201ENST00000338850 FAM95CA0A1B0GW59 222 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 ENO4A6NNW6 628 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 M0QZQ0 153 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 CLDN5O00501 218 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 SKAP2O75563 359 aaPredicted RBP10.83□□□□□ -0.68
RTN3-201ENST00000338850 WISP3O95389 354 aaPredicted RBP10.83□□□□□ -0.68
RTN3-201ENST00000338850 BAG2O95816 211 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 GLUD1P00367 558 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 C8BP07358 591 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 RBP1P09455 135 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 VCLP18206 1134 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 ME2P23368 584 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 NMBRP28336 390 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 AVPR2P30518 371 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 MRPL19P49406 292 aaKnown RBP10.83□□□□□ -0.68
RTN3-201ENST00000338850 CHN2P52757 468 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 EPHB1P54762 984 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 PTPN5P54829 565 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 IRF9Q00978 393 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 PFKPQ01813 784 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 TCF15Q12870 199 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 USP4Q13107 963 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 LAMB3Q13751 1172 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 SQLEQ14534 574 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 USP10Q14694 798 aaKnown RBP10.83□□□□□ -0.68
RTN3-201ENST00000338850 RBBP5Q15291 538 aaKnown RBP10.83□□□□□ -0.68
RTN3-201ENST00000338850 SFT2D3Q587I9 215 aa10.83□□□□□ -0.68
RTN3-201ENST00000338850 ARL13AQ5H913 290 aaPredicted RBP10.83□□□□□ -0.68
RTN3-201ENST00000338850 CERCAMQ5T4B2 595 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms