RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 MYOCOSA0A1B0GUC4 107 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 DPPA5A6NC42 116 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 CD3EAPO15446 510 aaKnown RBP8.87□□□□□ -0.99
SNCA-201ENST00000336904 MAGEC1O60732 1142 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 FGFR3P22607 806 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 ALDH7A1P49419 539 aaKnown RBP8.87□□□□□ -0.99
SNCA-201ENST00000336904 PSEN1P49768 467 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 AGTR2P50052 363 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 RAP1GDS1P52306 607 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 MS4A2Q01362 244 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 GNA12Q03113 381 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 GPR17Q13304 367 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 FAM83EQ2M2I3 478 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 TSNAXIP1Q2TAA8 658 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 C18orf21Q32NC0 220 aaPredicted RBP8.87□□□□□ -0.99
SNCA-201ENST00000336904 RNF219Q5W0B1 726 aaPredicted RBP8.87□□□□□ -0.99
SNCA-201ENST00000336904 TXNDC8Q6A555 127 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 MSANTD2Q6P1R3 559 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 TMEM154Q6P9G4 183 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 ACAD11Q709F0 780 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 CUZD1Q86UP6 607 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 PIANPQ8IYJ0 282 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 DSELQ8IZU8 1212 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 MDGA1Q8NFP4 955 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 CMTM5Q96DZ9 223 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 SPDL1Q96EA4 605 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 FUBP3Q96I24 572 aaKnown RBP eCLIP8.87□□□□□ -0.99
SNCA-201ENST00000336904 MYCBPQ99417 103 aaPredicted RBP8.87□□□□□ -0.99
SNCA-201ENST00000336904 TRIM62Q9BVG3 475 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 CINPQ9BW66 212 aaPredicted RBP8.87□□□□□ -0.99
SNCA-201ENST00000336904 YIPF3Q9GZM5 350 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 POLR1EQ9GZS1 481 aaKnown RBP8.87□□□□□ -0.99
SNCA-201ENST00000336904 ADA2Q9NZK5 511 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 STX18Q9P2W9 335 aaKnown RBP8.87□□□□□ -0.99
SNCA-201ENST00000336904 TIMM22Q9Y584 194 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 PRUNE2Q8WUY3 3088 aa8.87□□□□□ -0.99
SNCA-201ENST00000336904 SDHDO14521 159 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 INSIG1O15503 277 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 MAP3K7O43318 606 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 NIPSNAP2O75323 286 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 GLP2RO95838 553 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 LTA4HP09960 611 aaKnown RBP8.86□□□□□ -0.99
SNCA-201ENST00000336904 CHRM3P20309 590 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 ATP6V1C1P21283 382 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 PRDX3P30048 256 aaKnown RBP8.86□□□□□ -0.99
SNCA-201ENST00000336904 ATP5C1P36542 298 aaKnown RBP8.86□□□□□ -0.99
SNCA-201ENST00000336904 NDST2P52849 883 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 ZXDBP98169 803 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 NOGQ13253 232 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 TRIP10Q15642 601 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 GRAMD1BQ3KR37 738 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 SFT2D3Q587I9 215 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 PSAPL1Q6NUJ1 521 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 PAQR3Q6TCH7 311 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 CYP2R1Q6VVX0 501 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 TPGS1Q6ZTW0 290 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 NET1Q7Z628 596 aaPredicted RBP8.86□□□□□ -0.99
SNCA-201ENST00000336904 CNTN4Q8IWV2 1026 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 FAM126BQ8IXS8 530 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 PTGR2Q8N8N7 351 aaPredicted RBP8.86□□□□□ -0.99
SNCA-201ENST00000336904 C1orf74Q96LT6 269 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 EBF3Q9H4W6 596 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 FKBPLQ9UIM3 349 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 PCDHGB4Q9UN71 923 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 ARHGAP26Q9UNA1 814 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 PCDHGB5Q9Y5G0 923 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 VCANP13611 3396 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 MYOFQ9NZM1 2061 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 TMEM114B3SHH9 223 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 CDC7O00311 574 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 SYN3O14994 580 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 PSMD3O43242 534 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 ACSL4O60488 711 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 PRAMEF11O60813 436 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 RHOCP08134 193 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 ALOX15P16050 662 aaPredicted RBP8.86□□□□□ -0.99
SNCA-201ENST00000336904 CA5AP35218 305 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 CSRP3P50461 194 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 AQP4P55087 323 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 PLIN5Q00G26 463 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 TIAL1Q01085 375 aaKnown RBP eCLIP8.86□□□□□ -0.99
SNCA-201ENST00000336904 PRKAA1Q13131 559 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 CEACAM7Q14002 265 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 CYLC2Q14093 348 aaPredicted RBP8.86□□□□□ -0.99
SNCA-201ENST00000336904 MRPL58Q14197 206 aaKnown RBP8.86□□□□□ -0.99
SNCA-201ENST00000336904 AGKQ53H12 422 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 RNF220Q5VTB9 566 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 PAOXQ6QHF9 649 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 GLT6D1Q7Z4J2 308 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 MYLK4Q86YV6 388 aaPredicted RBP8.86□□□□□ -0.99
SNCA-201ENST00000336904 DDIASQ8IXT1 998 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 HMGCLL1Q8TB92 370 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 TRPC4APQ8TEL6 797 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 CDK15Q96Q40 435 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 HIPK3Q9H422 1215 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 CLIC5Q9NZA1 410 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 LRRC42Q9Y546 428 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 ASB1Q9Y576 335 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 ARHGEF37A1IGU5 675 aa8.86□□□□□ -0.99
SNCA-201ENST00000336904 NPEPPSL1A6NEC2 478 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms