RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 ZNF821O75541 412 aaPredicted RBP16.99■□□□□ 0.31
DDX41-201ENST00000330503 FGF19O95750 216 aa16.99■□□□□ 0.31
DDX41-201ENST00000330503 DDX6P26196 483 aaKnown RBP eCLIP16.99■□□□□ 0.31
DDX41-201ENST00000330503 SERPINB3P29508 390 aa16.99■□□□□ 0.31
DDX41-201ENST00000330503 SLC12A2P55011 1212 aa16.99■□□□□ 0.31
DDX41-201ENST00000330503 AQP5P55064 265 aa16.99■□□□□ 0.31
DDX41-201ENST00000330503 TIAL1Q01085 375 aaKnown RBP eCLIP16.99■□□□□ 0.31
DDX41-201ENST00000330503 CTC1Q2NKJ3 1217 aa16.99■□□□□ 0.31
DDX41-201ENST00000330503 PLEKHG6Q3KR16 790 aa16.99■□□□□ 0.31
DDX41-201ENST00000330503 RALGPS1Q5JS13 557 aa16.99■□□□□ 0.31
DDX41-201ENST00000330503 RETSATQ6NUM9 610 aa16.99■□□□□ 0.31
DDX41-201ENST00000330503 CLNKQ7Z7G1 428 aa16.99■□□□□ 0.31
DDX41-201ENST00000330503 TMEM25Q86YD3 366 aa16.99■□□□□ 0.31
DDX41-201ENST00000330503 TTC30BQ8N4P2 665 aa16.99■□□□□ 0.31
DDX41-201ENST00000330503 PDCD6IPQ8WUM4 868 aaKnown RBP16.99■□□□□ 0.31
DDX41-201ENST00000330503 ACDQ96AP0 544 aa16.99■□□□□ 0.31
DDX41-201ENST00000330503 PRR11Q96HE9 360 aaPredicted RBP16.99■□□□□ 0.31
DDX41-201ENST00000330503 SCYL1Q96KG9 808 aa16.99■□□□□ 0.31
DDX41-201ENST00000330503 TSNARE1Q96NA8 513 aa16.99■□□□□ 0.31
DDX41-201ENST00000330503 GATA5Q9BWX5 397 aaPredicted RBP16.99■□□□□ 0.31
DDX41-201ENST00000330503 UNKQ9C0B0 810 aaKnown RBP16.99■□□□□ 0.31
DDX41-201ENST00000330503 CATSPERZQ9NTU4 200 aa16.99■□□□□ 0.31
DDX41-201ENST00000330503 ZFP69BQ9UJL9 534 aa16.99■□□□□ 0.31
DDX41-201ENST00000330503 CRYL1Q9Y2S2 319 aa16.99■□□□□ 0.31
DDX41-201ENST00000330503 A0A0U1RQS6 177 aa16.99■□□□□ 0.31
DDX41-201ENST00000330503 PRSS36Q5K4E3 855 aa16.99■□□□□ 0.31
DDX41-201ENST00000330503 ASTLQ6HA08 431 aaPredicted RBP16.99■□□□□ 0.31
DDX41-201ENST00000330503 MRNIPQ6NTE8 343 aa16.99■□□□□ 0.31
DDX41-201ENST00000330503 TMEM207Q6UWW9 146 aa16.99■□□□□ 0.31
DDX41-201ENST00000330503 CCDC91Q7Z6B0 441 aa16.99■□□□□ 0.31
DDX41-201ENST00000330503 MOCOSQ96EN8 888 aa16.99■□□□□ 0.31
DDX41-201ENST00000330503 TM6SF2Q9BZW4 377 aa16.99■□□□□ 0.31
DDX41-201ENST00000330503 ABCB8Q9NUT2 735 aa16.99■□□□□ 0.31
DDX41-201ENST00000330503 C2orf81A6NN90 581 aa16.98■□□□□ 0.31
DDX41-201ENST00000330503 PER2O15055 1255 aa16.98■□□□□ 0.31
DDX41-201ENST00000330503 PRAMEF12O95522 483 aa16.98■□□□□ 0.31
DDX41-201ENST00000330503 RB1P06400 928 aa16.98■□□□□ 0.31
DDX41-201ENST00000330503 BMP1P13497 986 aa16.98■□□□□ 0.31
DDX41-201ENST00000330503 LPOP22079 712 aaPredicted RBP16.98■□□□□ 0.31
DDX41-201ENST00000330503 HOXA9P31269 272 aa16.98■□□□□ 0.31
DDX41-201ENST00000330503 DGKKQ5KSL6 1271 aa16.98■□□□□ 0.31
DDX41-201ENST00000330503 SPDYAQ5MJ70 313 aa16.98■□□□□ 0.31
DDX41-201ENST00000330503 ZNF697Q5TEC3 545 aa16.98■□□□□ 0.31
DDX41-201ENST00000330503 FAM109BQ6ICB4 259 aaPredicted RBP16.98■□□□□ 0.31
DDX41-201ENST00000330503 ASRGL1Q7L266 308 aa16.98■□□□□ 0.31
DDX41-201ENST00000330503 PIWIL2Q8TC59 973 aaKnown RBP16.98■□□□□ 0.31
DDX41-201ENST00000330503 UBXN10Q96LJ8 280 aa16.98■□□□□ 0.31
DDX41-201ENST00000330503 ZSWIM3Q96MP5 696 aa16.98■□□□□ 0.31
DDX41-201ENST00000330503 TDP1Q9NUW8 608 aa16.98■□□□□ 0.31
DDX41-201ENST00000330503 EVLQ9UI08 416 aaPredicted RBP16.98■□□□□ 0.31
DDX41-201ENST00000330503 MID2Q9UJV3 735 aa16.98■□□□□ 0.31
DDX41-201ENST00000330503 MTF2Q9Y483 593 aaPredicted RBP16.98■□□□□ 0.31
DDX41-201ENST00000330503 PCDHB9Q9Y5E1 797 aa16.98■□□□□ 0.31
DDX41-201ENST00000330503 HCFC2Q9Y5Z7 792 aa16.98■□□□□ 0.31
DDX41-201ENST00000330503 DLX3O60479 287 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 UNC5CO95185 931 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 CYBBP04839 570 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 HNRNPA1P09651 372 aaKnown RBP eCLIP16.97■□□□□ 0.31
DDX41-201ENST00000330503 OGNP20774 298 aaKnown RBP16.97■□□□□ 0.31
DDX41-201ENST00000330503 SKIV2L2P42285 1042 aaKnown RBP16.97■□□□□ 0.31
DDX41-201ENST00000330503 CTSOP43234 321 aaPredicted RBP16.97■□□□□ 0.31
DDX41-201ENST00000330503 AP1S1P61966 158 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 TYSND1Q2T9J0 566 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 TSNAXIP1Q2TAA8 658 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 ALYREFQ86V81 257 aaKnown RBP16.97■□□□□ 0.31
DDX41-201ENST00000330503 CAMK1DQ8IU85 385 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 EFHBQ8N7U6 833 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 OR6K2Q8NGY2 324 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 ANKRD49Q8WVL7 239 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 PIH1D2Q8WWB5 315 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 TSPAN17Q96FV3 270 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 LINC00597Q9H2U6 94 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 SLC40A1Q9NP59 571 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 ACSS2Q9NR19 701 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 XPR1Q9UBH6 696 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 MYOFQ9NZM1 2061 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 H0YHG0 523 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 ZNF195O14628 629 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 PGLSO95336 258 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 HLA-FP30511 346 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 GKP32189 559 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 CSNK1DP48730 415 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 STC1P52823 247 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 CSHL1Q14406 222 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 ARHGAP15Q53QZ3 475 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 PITRM1Q5JRX3 1037 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 LIPMQ5VYY2 423 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 FBXW10Q5XX13 1052 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 MAVSQ7Z434 540 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 SDCCAG8Q86SQ7 713 aaPredicted RBP16.97■□□□□ 0.31
DDX41-201ENST00000330503 TBC1D1Q86TI0 1168 aaPredicted RBP16.97■□□□□ 0.31
DDX41-201ENST00000330503 VOPP1Q96AW1 172 aa16.97■□□□□ 0.31
DDX41-201ENST00000330503 MRPL57Q9BQC6 102 aaKnown RBP16.97■□□□□ 0.31
DDX41-201ENST00000330503 TMEM114B3SHH9 223 aa16.96■□□□□ 0.31
DDX41-201ENST00000330503 TRAFD1O14545 582 aaPredicted RBP16.96■□□□□ 0.31
DDX41-201ENST00000330503 RASSF9O75901 435 aa16.96■□□□□ 0.31
DDX41-201ENST00000330503 PENKP01210 267 aaPredicted RBP16.96■□□□□ 0.31
DDX41-201ENST00000330503 CCDC166P0CW27 439 aa16.96■□□□□ 0.31
DDX41-201ENST00000330503 FDXRP22570 491 aa16.96■□□□□ 0.31
DDX41-201ENST00000330503 TARSP26639 723 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms