RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 RPL26L1Q9UNX3 145 aaKnown RBP20.34■□□□□ 0.85
RIPPLY3-201ENST00000329553 MRPS23Q9Y3D9 190 aaKnown RBP20.34■□□□□ 0.85
RIPPLY3-201ENST00000329553 ANKRD66B4E2M5 251 aa20.34■□□□□ 0.85
RIPPLY3-201ENST00000329553 PLIN3O60664 434 aa20.34■□□□□ 0.85
RIPPLY3-201ENST00000329553 PENKP01210 267 aaPredicted RBP20.34■□□□□ 0.85
RIPPLY3-201ENST00000329553 BPGMP07738 259 aa20.34■□□□□ 0.85
RIPPLY3-201ENST00000329553 GM2AP17900 193 aa20.34■□□□□ 0.85
RIPPLY3-201ENST00000329553 CD151P48509 253 aa20.34■□□□□ 0.85
RIPPLY3-201ENST00000329553 IRF9Q00978 393 aa20.34■□□□□ 0.85
RIPPLY3-201ENST00000329553 ASTLQ6HA08 431 aaPredicted RBP20.34■□□□□ 0.85
RIPPLY3-201ENST00000329553 CNSTQ6PJW8 725 aa20.34■□□□□ 0.85
RIPPLY3-201ENST00000329553 KIAA0408Q6ZU52 694 aa20.34■□□□□ 0.85
RIPPLY3-201ENST00000329553 SLC41A1Q8IVJ1 513 aa20.34■□□□□ 0.85
RIPPLY3-201ENST00000329553 MDGA1Q8NFP4 955 aa20.34■□□□□ 0.85
RIPPLY3-201ENST00000329553 STYXQ8WUJ0 223 aa20.34■□□□□ 0.85
RIPPLY3-201ENST00000329553 IRF7Q92985 503 aa20.34■□□□□ 0.85
RIPPLY3-201ENST00000329553 NKX1-2Q9UD57 310 aaPredicted RBP20.34■□□□□ 0.85
RIPPLY3-201ENST00000329553 NEDD8-MDP1E9PL57 170 aa20.33■□□□□ 0.85
RIPPLY3-201ENST00000329553 DNAJC6O75061 913 aa20.33■□□□□ 0.85
RIPPLY3-201ENST00000329553 POU2F2P09086 479 aa20.33■□□□□ 0.85
RIPPLY3-201ENST00000329553 GNAZP19086 355 aa20.33■□□□□ 0.85
RIPPLY3-201ENST00000329553 CLNS1AP54105 237 aaKnown RBP20.33■□□□□ 0.85
RIPPLY3-201ENST00000329553 PITRM1Q5JRX3 1037 aa20.33■□□□□ 0.85
RIPPLY3-201ENST00000329553 CLEC14AQ86T13 490 aa20.33■□□□□ 0.85
RIPPLY3-201ENST00000329553 CILP2Q8IUL8 1156 aa20.33■□□□□ 0.85
RIPPLY3-201ENST00000329553 NUDCD3Q8IVD9 361 aa20.33■□□□□ 0.85
RIPPLY3-201ENST00000329553 SMG7Q92540 1137 aaKnown RBP20.33■□□□□ 0.85
RIPPLY3-201ENST00000329553 RPL10LQ96L21 214 aaKnown RBP20.33■□□□□ 0.85
RIPPLY3-201ENST00000329553 BBS2Q9BXC9 721 aa20.33■□□□□ 0.85
RIPPLY3-201ENST00000329553 ADGRE3Q9BY15 652 aa20.33■□□□□ 0.85
RIPPLY3-201ENST00000329553 SIRPGQ9P1W8 387 aa20.33■□□□□ 0.85
RIPPLY3-201ENST00000329553 MARCH4Q9P2E8 410 aaPredicted RBP20.33■□□□□ 0.85
RIPPLY3-201ENST00000329553 RIMKLBQ9ULI2 386 aa20.33■□□□□ 0.85
RIPPLY3-201ENST00000329553 FAM95CA0A1B0GW59 222 aa20.33■□□□□ 0.84
RIPPLY3-201ENST00000329553 PROCP04070 461 aa20.33■□□□□ 0.84
RIPPLY3-201ENST00000329553 CALB2P22676 271 aa20.33■□□□□ 0.84
RIPPLY3-201ENST00000329553 CTSOP43234 321 aaPredicted RBP20.33■□□□□ 0.84
RIPPLY3-201ENST00000329553 LEPRP48357 1165 aaKnown RBP20.33■□□□□ 0.84
RIPPLY3-201ENST00000329553 NRIP1P48552 1158 aa20.33■□□□□ 0.84
RIPPLY3-201ENST00000329553 USP4Q13107 963 aa20.33■□□□□ 0.84
RIPPLY3-201ENST00000329553 PTPRRQ15256 657 aa20.33■□□□□ 0.84
RIPPLY3-201ENST00000329553 WASHC2DQ5SRD0 308 aa20.33■□□□□ 0.84
RIPPLY3-201ENST00000329553 TMC5Q6UXY8 1006 aa20.33■□□□□ 0.84
RIPPLY3-201ENST00000329553 LDB1Q86U70 411 aaPredicted RBP20.33■□□□□ 0.84
RIPPLY3-201ENST00000329553 OR6K2Q8NGY2 324 aa20.33■□□□□ 0.84
RIPPLY3-201ENST00000329553 PBX4Q9BYU1 374 aa20.33■□□□□ 0.84
RIPPLY3-201ENST00000329553 SPHK2Q9NRA0 654 aa20.33■□□□□ 0.84
RIPPLY3-201ENST00000329553 A0A0G2JND7 137 aa20.32■□□□□ 0.84
RIPPLY3-201ENST00000329553 KLF11O14901 512 aa20.32■□□□□ 0.84
RIPPLY3-201ENST00000329553 BIRC5O15392 142 aa20.32■□□□□ 0.84
RIPPLY3-201ENST00000329553 PHGDHO43175 533 aaKnown RBP20.32■□□□□ 0.84
RIPPLY3-201ENST00000329553 ZNF821O75541 412 aaPredicted RBP20.32■□□□□ 0.84
RIPPLY3-201ENST00000329553 CRTAMO95727 393 aa20.32■□□□□ 0.84
RIPPLY3-201ENST00000329553 GOT2P00505 430 aaKnown RBP20.32■□□□□ 0.84
RIPPLY3-201ENST00000329553 DLDP09622 509 aaKnown RBP20.32■□□□□ 0.84
RIPPLY3-201ENST00000329553 SLC12A1Q13621 1099 aa20.32■□□□□ 0.84
RIPPLY3-201ENST00000329553 RALGPS1Q5JS13 557 aa20.32■□□□□ 0.84
RIPPLY3-201ENST00000329553 CES4AQ5XG92 561 aa20.32■□□□□ 0.84
RIPPLY3-201ENST00000329553 RAPH1Q70E73 1250 aa20.32■□□□□ 0.84
RIPPLY3-201ENST00000329553 ADGRG2Q8IZP9 1017 aa20.32■□□□□ 0.84
RIPPLY3-201ENST00000329553 SKA1Q96BD8 255 aa20.32■□□□□ 0.84
RIPPLY3-201ENST00000329553 TBC1D14Q9P2M4 693 aa20.32■□□□□ 0.84
RIPPLY3-201ENST00000329553 HEY2Q9UBP5 337 aa20.32■□□□□ 0.84
RIPPLY3-201ENST00000329553 EVLQ9UI08 416 aaPredicted RBP20.32■□□□□ 0.84
RIPPLY3-201ENST00000329553 WNT6Q9Y6F9 365 aa20.32■□□□□ 0.84
RIPPLY3-201ENST00000329553 CCDC162PA2VCL2 907 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 FZD6O60353 706 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 RPP40O75818 363 aaKnown RBP20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 ARFIP2P53365 341 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 TAF1AQ15573 450 aaPredicted RBP20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 CHI3L2Q15782 390 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 DUSP6Q16828 381 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 FUT11Q495W5 492 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 DGKKQ5KSL6 1271 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 LY6G5CQ5SRR4 150 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 GLT6D1Q7Z4J2 308 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 CEP97Q8IW35 865 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 ENDOVQ8N8Q3 282 aaKnown RBP20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 GABPB2Q8TAK5 448 aaPredicted RBP20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 E2F7Q96AV8 911 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 PTCD3Q96EY7 689 aaKnown RBP20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 CDKN2AIPNLQ96HQ2 116 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 ANKRD27Q96NW4 1050 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 LRRC3BQ96PB8 259 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 MIPEPQ99797 713 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 TUBB6Q9BUF5 446 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 NKX2-4Q9H2Z4 354 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 ZMYM5Q9UJ78 669 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 PCDHB9Q9Y5E1 797 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 ATG2AQ2TAZ0 1938 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 S1PR4O95977 384 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 TYRP14679 529 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 ABL2P42684 1182 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 POLD2P49005 469 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 ZNF140P52738 457 aaPredicted RBP20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 AP1S1P61966 158 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 FASTKD1Q53R41 847 aaKnown RBP20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 RBM20Q5T481 1227 aaKnown RBP20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 ELMSAN1Q6PJG2 1045 aa20.31■□□□□ 0.84
RIPPLY3-201ENST00000329553 CAMK1DQ8IU85 385 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms