RNA–Protein interactions for RNA: ENST00000323224.7

TYMS-201, Transcript of thymidylate synthetase, humanhuman

TSL 1 (best) BASIC

Gene TYMS, Length 1,327 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-201ENST00000323224 LHCGRP22888 699 aa18.8■□□□□ 0.6
TYMS-201ENST00000323224 MMP13P45452 471 aa18.8■□□□□ 0.6
TYMS-201ENST00000323224 ABCG1P45844 678 aa18.8■□□□□ 0.6
TYMS-201ENST00000323224 GABREP78334 506 aa18.8■□□□□ 0.6
TYMS-201ENST00000323224 ISXQ2M1V0 245 aa18.8■□□□□ 0.6
TYMS-201ENST00000323224 SOWAHCQ53LP3 525 aaPredicted RBP18.8■□□□□ 0.6
TYMS-201ENST00000323224 DENND2CQ68D51 928 aa18.8■□□□□ 0.6
TYMS-201ENST00000323224 NCBP2-AS2Q69YL0 99 aa18.8■□□□□ 0.6
TYMS-201ENST00000323224 TSPAN33Q86UF1 283 aa18.8■□□□□ 0.6
TYMS-201ENST00000323224 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.8■□□□□ 0.6
TYMS-201ENST00000323224 SNIP1Q8TAD8 396 aaKnown RBP18.8■□□□□ 0.6
TYMS-201ENST00000323224 ATXN7L3BQ96GX2 97 aa18.8■□□□□ 0.6
TYMS-201ENST00000323224 CCDC3Q9BQI4 270 aa18.8■□□□□ 0.6
TYMS-201ENST00000323224 NT5MQ9NPB1 228 aa18.8■□□□□ 0.6
TYMS-201ENST00000323224 EVA1BQ9NVM1 165 aa18.8■□□□□ 0.6
TYMS-201ENST00000323224 CTTNBP2NLQ9P2B4 639 aa18.8■□□□□ 0.6
TYMS-201ENST00000323224 PADI4Q9UM07 663 aa18.8■□□□□ 0.6
TYMS-201ENST00000323224 FASNP49327 2511 aaKnown RBP18.8■□□□□ 0.6
TYMS-201ENST00000323224 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.79■□□□□ 0.6
TYMS-201ENST00000323224 CFAP69A5D8W1 941 aa18.79■□□□□ 0.6
TYMS-201ENST00000323224 NPIPB15A6NHN6 443 aaPredicted RBP18.79■□□□□ 0.6
TYMS-201ENST00000323224 CTPS1P17812 591 aa18.79■□□□□ 0.6
TYMS-201ENST00000323224 HTR1BP28222 390 aa18.79■□□□□ 0.6
TYMS-201ENST00000323224 HNRNPH3P31942 346 aaKnown RBP18.79■□□□□ 0.6
TYMS-201ENST00000323224 SERPINB6P35237 376 aa18.79■□□□□ 0.6
TYMS-201ENST00000323224 BLKP51451 505 aa18.79■□□□□ 0.6
TYMS-201ENST00000323224 PDX1P52945 283 aa18.79■□□□□ 0.6
TYMS-201ENST00000323224 POLR2LP62875 67 aaKnown RBP18.79■□□□□ 0.6
TYMS-201ENST00000323224 CCDC173Q0VFZ6 552 aa18.79■□□□□ 0.6
TYMS-201ENST00000323224 ELOCQ15369 112 aa18.79■□□□□ 0.6
TYMS-201ENST00000323224 TBC1D25Q3MII6 688 aa18.79■□□□□ 0.6
TYMS-201ENST00000323224 RFLNAQ6ZTI6 216 aa18.79■□□□□ 0.6
TYMS-201ENST00000323224 HSD11B1LQ7Z5J1 315 aa18.79■□□□□ 0.6
TYMS-201ENST00000323224 FSTL5Q8N475 847 aaPredicted RBP18.79■□□□□ 0.6
TYMS-201ENST00000323224 CCL4L1Q8NHW4 92 aa18.79■□□□□ 0.6
TYMS-201ENST00000323224 SPOCK2Q92563 424 aa18.79■□□□□ 0.6
TYMS-201ENST00000323224 FGF11Q92914 225 aa18.79■□□□□ 0.6
TYMS-201ENST00000323224 IQCDQ96DY2 449 aa18.79■□□□□ 0.6
TYMS-201ENST00000323224 SYNDIG1Q9H7V2 258 aa18.79■□□□□ 0.6
TYMS-201ENST00000323224 NCKIPSDQ9NZQ3 722 aa18.79■□□□□ 0.6
TYMS-201ENST00000323224 GPR34Q9UPC5 381 aa18.79■□□□□ 0.6
TYMS-201ENST00000323224 DOLKQ9UPQ8 538 aa18.79■□□□□ 0.6
TYMS-201ENST00000323224 ENTPD2Q9Y5L3 495 aa18.79■□□□□ 0.6
TYMS-201ENST00000323224 SOCS5O75159 536 aa18.78■□□□□ 0.6
TYMS-201ENST00000323224 PROSCO94903 275 aa18.78■□□□□ 0.6
TYMS-201ENST00000323224 HEXIM1O94992 359 aaKnown RBP18.78■□□□□ 0.6
TYMS-201ENST00000323224 PDHA1P08559 390 aa18.78■□□□□ 0.6
TYMS-201ENST00000323224 ALPIP09923 528 aa18.78■□□□□ 0.6
TYMS-201ENST00000323224 VIPR1P32241 457 aa18.78■□□□□ 0.6
TYMS-201ENST00000323224 TRIM23P36406 574 aa18.78■□□□□ 0.6
TYMS-201ENST00000323224 HSPA9P38646 679 aaKnown RBP18.78■□□□□ 0.6
TYMS-201ENST00000323224 ETV3P41162 512 aa18.78■□□□□ 0.6
TYMS-201ENST00000323224 KIAA1024LP59773 190 aa18.78■□□□□ 0.6
TYMS-201ENST00000323224 ASTE1Q2TB18 679 aaPredicted RBP18.78■□□□□ 0.6
TYMS-201ENST00000323224 C3orf38Q5JPI3 329 aa18.78■□□□□ 0.6
TYMS-201ENST00000323224 MARC1Q5VT66 337 aa18.78■□□□□ 0.6
TYMS-201ENST00000323224 PNCKQ6P2M8 343 aa18.78■□□□□ 0.6
TYMS-201ENST00000323224 OR56A4Q8NGH8 313 aa18.78■□□□□ 0.6
TYMS-201ENST00000323224 PTCD2Q8WV60 388 aaKnown RBP18.78■□□□□ 0.6
TYMS-201ENST00000323224 CCDC74AQ96AQ1 378 aa18.78■□□□□ 0.6
TYMS-201ENST00000323224 NAF1Q96HR8 494 aaKnown RBP18.78■□□□□ 0.6
TYMS-201ENST00000323224 RBM15Q96T37 977 aaKnown RBP eCLIP18.78■□□□□ 0.65e-7■■□□□ 11.5
TYMS-201ENST00000323224 SEMA3CQ99985 751 aa18.78■□□□□ 0.6
TYMS-201ENST00000323224 TMEM168Q9H0V1 697 aa18.78■□□□□ 0.6
TYMS-201ENST00000323224 SUDS3Q9H7L9 328 aaPredicted RBP18.78■□□□□ 0.6
TYMS-201ENST00000323224 SATB2Q9UPW6 733 aa18.78■□□□□ 0.6
TYMS-201ENST00000323224 DGKBQ9Y6T7 804 aa18.78■□□□□ 0.6
TYMS-201ENST00000323224 UNC13CQ8NB66 2214 aa18.78■□□□□ 0.6
TYMS-201ENST00000323224 BAHCC1Q9P281 2608 aa18.77■□□□□ 0.6
TYMS-201ENST00000323224 CACNB4O00305 520 aaPredicted RBP18.77■□□□□ 0.6
TYMS-201ENST00000323224 PGLSO95336 258 aa18.77■□□□□ 0.6
TYMS-201ENST00000323224 TNFP01375 233 aa18.77■□□□□ 0.6
TYMS-201ENST00000323224 FUCA1P04066 466 aa18.77■□□□□ 0.6
TYMS-201ENST00000323224 GARSP41250 739 aaKnown RBP18.77■□□□□ 0.6
TYMS-201ENST00000323224 RPIAP49247 311 aa18.77■□□□□ 0.6
TYMS-201ENST00000323224 DSC2Q02487 901 aa18.77■□□□□ 0.6
TYMS-201ENST00000323224 GALNT2Q10471 571 aa18.77■□□□□ 0.6
TYMS-201ENST00000323224 PAFAH1B3Q15102 231 aaKnown RBP18.77■□□□□ 0.6
TYMS-201ENST00000323224 SLC18A3Q16572 532 aa18.77■□□□□ 0.6
TYMS-201ENST00000323224 HADHQ16836 314 aaKnown RBP18.77■□□□□ 0.6
TYMS-201ENST00000323224 ANKRD20A8PQ5CZ79 823 aa18.77■□□□□ 0.6
TYMS-201ENST00000323224 ESRP1Q6NXG1 681 aaKnown RBP18.77■□□□□ 0.6
TYMS-201ENST00000323224 RBM44Q6ZP01 1051 aaKnown RBP18.77■□□□□ 0.6
TYMS-201ENST00000323224 CBARPQ8N350 705 aaPredicted RBP18.77■□□□□ 0.6
TYMS-201ENST00000323224 TEX26Q8N6G2 289 aa18.77■□□□□ 0.6
TYMS-201ENST00000323224 PQLC3Q8N755 202 aa18.77■□□□□ 0.6
TYMS-201ENST00000323224 ARL10Q8N8L6 244 aa18.77■□□□□ 0.6
TYMS-201ENST00000323224 PIH1D2Q8WWB5 315 aa18.77■□□□□ 0.6
TYMS-201ENST00000323224 GLMNQ92990 594 aa18.77■□□□□ 0.6
TYMS-201ENST00000323224 NUS1Q96E22 293 aa18.77■□□□□ 0.6
TYMS-201ENST00000323224 DNAJC7Q99615 494 aa18.77■□□□□ 0.6
TYMS-201ENST00000323224 WDR26Q9H7D7 661 aa18.77■□□□□ 0.6
TYMS-201ENST00000323224 POLR1BQ9H9Y6 1135 aa18.77■□□□□ 0.6
TYMS-201ENST00000323224 CYP4F12Q9HCS2 524 aa18.77■□□□□ 0.6
TYMS-201ENST00000323224 ASCL3Q9NQ33 180 aa18.77■□□□□ 0.6
TYMS-201ENST00000323224 RCOR3Q9P2K3 495 aaPredicted RBP18.77■□□□□ 0.6
TYMS-201ENST00000323224 MOSPD1Q9UJG1 213 aa18.77■□□□□ 0.6
TYMS-201ENST00000323224 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.77■□□□□ 0.64e-13■□□□□ 9.4
TYMS-201ENST00000323224 ACTN2P35609 894 aa18.76■□□□□ 0.59
TYMS-201ENST00000323224 LSSP48449 732 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms