RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 PABPC1LQ4VXU2 614 aaKnown RBP11.03□□□□□ -0.64
TOP3A-201ENST00000321105 AMIGO2Q86SJ2 522 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 FAM126BQ8IXS8 530 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 BHLHE22Q8NFJ8 381 aaPredicted RBP11.03□□□□□ -0.64
TOP3A-201ENST00000321105 STAG3L4Q8TBR4 150 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 ACMSDQ8TDX5 336 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 SMIM14Q96QK8 99 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 TXLNGYQ9BZA5 131 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 MTIF3Q9H2K0 278 aaKnown RBP11.03□□□□□ -0.64
TOP3A-201ENST00000321105 CAPN10Q9HC96 672 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 UBR3Q6ZT12 1888 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 CCDC162PA2VCL2 907 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 MTMR11A4FU01 709 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 PSMG1O95456 288 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 IGSF6O95976 241 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 ALDOAP04075 364 aaKnown RBP11.03□□□□□ -0.64
TOP3A-201ENST00000321105 NTRK1P04629 796 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 ZNF23P17027 643 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 GLDCP23378 1020 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 SLC34A1Q06495 639 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 TRMT5Q32P41 509 aaKnown RBP11.03□□□□□ -0.64
TOP3A-201ENST00000321105 MS4A13Q5J8X5 152 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 ARCQ7LC44 396 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 CUZD1Q86UP6 607 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 CPNE9Q8IYJ1 553 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 C10orf82Q8WW14 230 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 KCTD13Q8WZ19 329 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 MRPL57Q9BQC6 102 aaKnown RBP11.03□□□□□ -0.64
TOP3A-201ENST00000321105 CADM1Q9BY67 442 aaKnown RBP11.03□□□□□ -0.64
TOP3A-201ENST00000321105 WASF2Q9Y6W5 498 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 ARID1BQ8NFD5 2236 aaPredicted RBP11.03□□□□□ -0.64
TOP3A-201ENST00000321105 GNG14A0A1W2PPG7 69 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 SYCE1LA8MT33 242 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 AURKAO14965 403 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 LRATO95237 230 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 IL1BP01584 269 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 PCNAP12004 261 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 CYBAP13498 195 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 SERPINA4P29622 427 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 ESRRGP62508 458 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 ABRQ12979 859 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 SLC9B1Q4ZJI4 515 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 LPCAT4Q643R3 524 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 TMC5Q6UXY8 1006 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 PAQR9Q6ZVX9 377 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 NTAN1Q96AB6 310 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 OR52B2Q96RD2 323 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 PARVBQ9HBI1 364 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 VPS9D1Q9Y2B5 631 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 TDRKHQ9Y2W6 561 aaKnown RBP11.03□□□□□ -0.64
TOP3A-201ENST00000321105 RAP2CQ9Y3L5 183 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 ORC6Q9Y5N6 252 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 TYROBPO43914 113 aa11.02□□□□□ -0.64
TOP3A-201ENST00000321105 NIPSNAP2O75323 286 aa11.02□□□□□ -0.64
TOP3A-201ENST00000321105 RFPL1O75677 317 aa11.02□□□□□ -0.64
TOP3A-201ENST00000321105 PIK3R1P27986 724 aa11.02□□□□□ -0.64
TOP3A-201ENST00000321105 CLCN5P51795 746 aa11.02□□□□□ -0.64
TOP3A-201ENST00000321105 ZNF135P52742 658 aaPredicted RBP11.02□□□□□ -0.64
TOP3A-201ENST00000321105 KLF10Q13118 480 aa11.02□□□□□ -0.64
TOP3A-201ENST00000321105 CRY1Q16526 586 aa11.02□□□□□ -0.64
TOP3A-201ENST00000321105 PIWIL4Q7Z3Z4 852 aaKnown RBP11.02□□□□□ -0.64
TOP3A-201ENST00000321105 SLC22A9Q8IVM8 553 aa11.02□□□□□ -0.64
TOP3A-201ENST00000321105 CMTM8Q8IZV2 173 aa11.02□□□□□ -0.64
TOP3A-201ENST00000321105 IRGQQ8WZA9 623 aa11.02□□□□□ -0.64
TOP3A-201ENST00000321105 CDK15Q96Q40 435 aa11.02□□□□□ -0.64
TOP3A-201ENST00000321105 CDH19Q9H159 772 aa11.02□□□□□ -0.64
TOP3A-201ENST00000321105 CYLDQ9NQC7 956 aa11.02□□□□□ -0.64
TOP3A-201ENST00000321105 TRAF6Q9Y4K3 522 aa11.02□□□□□ -0.64
TOP3A-201ENST00000321105 ARHGAP10A1A4S6 786 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 OR2AG2A6NM03 316 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 STX16-NPEPL1H3BU86 382 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 CLDN11O75508 207 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 C8AP07357 584 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 GALTP07902 379 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 PRSS56P0CW18 603 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 CSF2RAP15509 400 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 TSHRP16473 764 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 TYMPP19971 482 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 DSG1Q02413 1049 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 TIGD2Q4W5G0 525 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 TSTD2Q5T7W7 516 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 TEDDM1Q5T9Z0 273 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 UGT3A1Q6NUS8 523 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.02□□□□□ -0.65
TOP3A-201ENST00000321105 PHTF2Q8N3S3 785 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 CNTD1Q8N815 330 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 SLAIN1Q8ND83 568 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 GDPD5Q8WTR4 605 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 FIG4Q92562 907 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 FAXDC2Q96IV6 333 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 SH3BP4Q9P0V3 963 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 NDUFAF1Q9Y375 327 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.02□□□□□ -0.65
TOP3A-201ENST00000321105 BRWD1Q9NSI6 2320 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 SRRM3A6NNA2 597 aaPredicted RBP11.02□□□□□ -0.65
TOP3A-201ENST00000321105 NDST3O95803 873 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 FGF1P05230 155 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 SERPINA6P08185 405 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 SOAT1P35610 550 aa11.02□□□□□ -0.65
TOP3A-201ENST00000321105 GRIA3P42263 894 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms