RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 SCG3Q8WXD2 468 aaKnown RBP7.59□□□□□ -1.19
IFT88-201ENST00000319980 PHF21BQ96EK2 531 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 TSPAN17Q96FV3 270 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 CDKN2AIPNLQ96HQ2 116 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 CLPTM1LQ96KA5 538 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 UBXN10Q96LJ8 280 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 FAM161BQ96MY7 647 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 YME1L1Q96TA2 773 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 TACO1Q9BSH4 297 aaKnown RBP7.59□□□□□ -1.19
IFT88-201ENST00000319980 REPIN1Q9BWE0 567 aaKnown RBP7.59□□□□□ -1.19
IFT88-201ENST00000319980 OSBPL1AQ9BXW6 950 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 RETREG1Q9H6L5 497 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 RNPEPL1Q9HAU8 725 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 ZNF334Q9HCZ1 680 aaPredicted RBP7.59□□□□□ -1.19
IFT88-201ENST00000319980 MRPL17Q9NRX2 175 aaKnown RBP7.59□□□□□ -1.19
IFT88-201ENST00000319980 SPO11Q9Y5K1 396 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 INSL5Q9Y5Q6 135 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 TBL1XO60907 577 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 RPP40O75818 363 aaKnown RBP7.59□□□□□ -1.19
IFT88-201ENST00000319980 WFS1O76024 890 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 CSPG5O95196 566 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 CRTAMO95727 393 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 PRLP01236 227 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 HNRNPLP14866 589 aaKnown RBP eCLIP7.59□□□□□ -1.19
IFT88-201ENST00000319980 CR2P20023 1033 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 KCNA5P22460 613 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 ATP5F1P24539 256 aaPredicted RBP7.59□□□□□ -1.19
IFT88-201ENST00000319980 ARF5P84085 180 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 SLC25A3Q00325 362 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 ACVR1Q04771 509 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 LAMB3Q13751 1172 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 SEMA3AQ14563 771 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 RFTN1Q14699 578 aaPredicted RBP7.59□□□□□ -1.19
IFT88-201ENST00000319980 TMEM207Q6UWW9 146 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 RPS27LQ71UM5 84 aaKnown RBP7.59□□□□□ -1.19
IFT88-201ENST00000319980 CHST9Q7L1S5 443 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 OTOP2Q7RTS6 562 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 GLT6D1Q7Z4J2 308 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 HERC6Q8IVU3 1022 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 LMNTD2Q8IXW0 634 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 LSMEM2Q8N112 164 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 ARHGAP24Q8N264 748 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 RYBPQ8N488 228 aaPredicted RBP7.59□□□□□ -1.19
IFT88-201ENST00000319980 LPCAT1Q8NF37 534 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 OR4K2Q8NGD2 314 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 PEX13Q92968 403 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 TMA16Q96EY4 203 aaKnown RBP7.59□□□□□ -1.19
IFT88-201ENST00000319980 ZFRQ96KR1 1074 aaKnown RBP7.59□□□□□ -1.19
IFT88-201ENST00000319980 NOP53Q9NZM5 478 aaKnown RBP7.59□□□□□ -1.19
IFT88-201ENST00000319980 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.59□□□□□ -1.19
IFT88-201ENST00000319980 VPS28Q9UK41 221 aa7.59□□□□□ -1.19
IFT88-201ENST00000319980 G3BP2Q9UN86 482 aaKnown RBP7.59□□□□□ -1.19
IFT88-201ENST00000319980 FNDC3AQ9Y2H6 1198 aaKnown RBP7.59□□□□□ -1.19
IFT88-201ENST00000319980 ALPK3Q96L96 1907 aa7.59□□□□□ -1.2
IFT88-201ENST00000319980 FNDC1Q4ZHG4 1894 aaPredicted RBP7.58□□□□□ -1.2
IFT88-201ENST00000319980 TMEM233B4DJY2 109 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 ZBTB14O43829 449 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 JUNP05412 331 aaKnown RBP7.58□□□□□ -1.2
IFT88-201ENST00000319980 LAG3P18627 525 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 PPP3CCP48454 512 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 ERFP50548 548 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 COPAP53621 1224 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 WDR5P61964 334 aaKnown RBP7.58□□□□□ -1.2
IFT88-201ENST00000319980 ASPHQ12797 758 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 ACAP2Q15057 778 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 PTPRRQ15256 657 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 PDCD2Q16342 344 aaPredicted RBP7.58□□□□□ -1.2
IFT88-201ENST00000319980 TECRLQ5HYJ1 363 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 SWT1Q5T5J6 900 aaKnown RBP7.58□□□□□ -1.2
IFT88-201ENST00000319980 C1orf53Q5VUE5 145 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 ZNF549Q6P9A3 640 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 GALNT7Q86SF2 657 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 SDCCAG8Q86SQ7 713 aaPredicted RBP7.58□□□□□ -1.2
IFT88-201ENST00000319980 DDX53Q86TM3 631 aaKnown RBP7.58□□□□□ -1.2
IFT88-201ENST00000319980 TCEAL8Q8IYN2 117 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 MDGA1Q8NFP4 955 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 DDX50Q9BQ39 737 aaKnown RBP7.58□□□□□ -1.2
IFT88-201ENST00000319980 TDRD1Q9BXT4 1180 aaKnown RBP7.58□□□□□ -1.2
IFT88-201ENST00000319980 CRISPLD2Q9H0B8 497 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 MMADHCQ9H3L0 296 aaPredicted RBP7.58□□□□□ -1.2
IFT88-201ENST00000319980 ALG9Q9H6U8 611 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 CATSPERZQ9NTU4 200 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 RPL26L1Q9UNX3 145 aaKnown RBP7.58□□□□□ -1.2
IFT88-201ENST00000319980 FIS1Q9Y3D6 152 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 RAI2Q9Y5P3 530 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 CPQQ9Y646 472 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 GREB1Q4ZG55 1949 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 A0A0U1RQS6 177 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 UBA6A0AVT1 1052 aaPredicted RBP7.58□□□□□ -1.2
IFT88-201ENST00000319980 GRID2O43424 1007 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 ZMPSTE24O75844 475 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 IPO13O94829 963 aaKnown RBP7.58□□□□□ -1.2
IFT88-201ENST00000319980 TMCC1O94876 653 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 CD160O95971 181 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 F11P03951 625 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 RBP1P09455 135 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 TPBGLP0DKB5 382 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 ZNF16P17020 682 aaPredicted RBP7.58□□□□□ -1.2
IFT88-201ENST00000319980 KCNC1P48547 511 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 CAMK2BQ13554 666 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms