RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 PCSK1P29120 753 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 GRIA1P42261 906 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 EEFSECP57772 596 aaKnown RBP4.52□□□□□ -1.69
CNOT1-201ENST00000317147 MAMLD1Q13495 774 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 TRAPPC3LQ5T215 181 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 HHIPL2Q6UWX4 724 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 CXXC5Q7LFL8 322 aaKnown RBP4.52□□□□□ -1.69
CNOT1-201ENST00000317147 TMC7Q7Z402 723 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 DPP10Q8N608 796 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 TMEM174Q8WUU8 243 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 RFKQ969G6 155 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 FAM149B1Q96BN6 582 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 TEKT5Q96M29 485 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 PCIF1Q9H4Z3 704 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 EXOSC4Q9NPD3 245 aaKnown RBP4.52□□□□□ -1.69
CNOT1-201ENST00000317147 SLCO1B3Q9NPD5 702 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 ACTR3BQ9P1U1 418 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 ZNF646O15015 1829 aaPredicted RBP4.52□□□□□ -1.69
CNOT1-201ENST00000317147 STRCQ7RTU9 1775 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 TOP3BO95985 862 aaKnown RBP4.52□□□□□ -1.69
CNOT1-201ENST00000317147 NR2F6P10588 404 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 MYF6P23409 242 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 DCKP27707 260 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 SCNN1AP37088 669 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 HLCSP50747 726 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 MYBPC1Q00872 1141 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 PRKD1Q15139 912 aaPredicted RBP4.52□□□□□ -1.69
CNOT1-201ENST00000317147 NDUFA9Q16795 377 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 CTC1Q2NKJ3 1217 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 PITRM1Q5JRX3 1037 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 ANKS3Q6ZW76 656 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 ERMP1Q7Z2K6 904 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 HERC6Q8IVU3 1022 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 CHERPQ8IWX8 916 aaKnown RBP4.52□□□□□ -1.69
CNOT1-201ENST00000317147 DCLK2Q8N568 766 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 STAG3L4Q8TBR4 150 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 PEX13Q92968 403 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 CERS2Q96G23 380 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 ARL5BQ96KC2 179 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 TXLNGYQ9BZA5 131 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 ZNF70Q9UC06 446 aaPredicted RBP4.52□□□□□ -1.69
CNOT1-201ENST00000317147 MLXQ9UH92 298 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 ACSL5Q9ULC5 683 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 F8W810 466 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 G3V2T6 193 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 BCKDKO14874 412 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 RAP2AP10114 183 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 BMP2P12643 396 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 GRIA3P42263 894 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 PEX3P56589 373 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 PPATQ06203 517 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 CNTN1Q12860 1018 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 EFR3AQ14156 821 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 STARD3Q14849 445 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 TAF12Q16514 161 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 CLPPQ16740 277 aaPredicted RBP4.52□□□□□ -1.69
CNOT1-201ENST00000317147 PLEKHG4Q58EX7 1191 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 FGD2Q7Z6J4 655 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 ATG16L2Q8NAA4 619 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 AGAP3Q96P47 875 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 DHX35Q9H5Z1 703 aaKnown RBP4.52□□□□□ -1.69
CNOT1-201ENST00000317147 TM9SF3Q9HD45 589 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 KCNMB3Q9NPA1 279 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 SIRPGQ9P1W8 387 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 MALT1Q9UDY8 824 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 MAB21L2Q9Y586 359 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 FRMPD3Q5JV73 1810 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 ZNF142P52746 1687 aaPredicted RBP4.52□□□□□ -1.69
CNOT1-201ENST00000317147 LCTP09848 1927 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 ANKDD1BA6NHY2 528 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 C2orf81A6NN90 581 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 RASAL1O95294 804 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 PHKG1Q16816 387 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 GPR107Q5VW38 600 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 STK32CQ86UX6 486 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 TMEM17Q86X19 198 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 GATAD2AQ86YP4 633 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 C4orf19Q8IY42 314 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 GSTCDQ8NEC7 633 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 LPCAT1Q8NF37 534 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 HAVCR2Q8TDQ0 301 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 RNFT2Q96EX2 444 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 CORO1BQ9BR76 489 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 THUMPD3Q9BV44 507 aaKnown RBP4.52□□□□□ -1.69
CNOT1-201ENST00000317147 SHCBP1LQ9BZQ2 653 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 SLITRK2Q9H156 845 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 POLR3FQ9H1D9 316 aaPredicted RBP4.52□□□□□ -1.69
CNOT1-201ENST00000317147 FOLH1BQ9HBA9 442 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 TMEM260Q9NX78 707 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 BRCA1P38398 1863 aaKnown RBP4.52□□□□□ -1.69
CNOT1-201ENST00000317147 hCG_1818297A0A087WSY0 165 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 RGS14O43566 566 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 SLC28A2O43868 658 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 GCATO75600 419 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 SOX30O94993 753 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 CYP19A1P11511 503 aaPredicted RBP4.52□□□□□ -1.69
CNOT1-201ENST00000317147 RCVRNP35243 200 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 SRP54P61011 504 aaKnown RBP4.52□□□□□ -1.69
CNOT1-201ENST00000317147 GTF2IP78347 998 aa4.52□□□□□ -1.69
CNOT1-201ENST00000317147 GALNT1Q10472 559 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms