RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 UGT1A1P22309 533 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 UGT1A4P22310 534 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 HMOX2P30519 316 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 ADRA1AP35348 466 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 UGT1A3P35503 534 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 UGT1A5P35504 534 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 HALP42357 657 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 CXCR3P49682 368 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 BNIP3Q12983 259 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 PDCD4Q53EL6 469 aaKnown RBP13.49□□□□□ -0.25
SKA3-202ENST00000314759 AGAP9Q5VTM2 703 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 NEPROQ6NW34 567 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 CENPSQ8N2Z9 138 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 ZMIZ2Q8NF64 920 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 ADAMTS16Q8TE57 1224 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 ERLEC1Q96DZ1 483 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 SLX1AQ9BQ83 275 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 NPLQ9BXD5 320 aaPredicted RBP13.49□□□□□ -0.25
SKA3-202ENST00000314759 GSTO2Q9H4Y5 243 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 MROH8Q9H579 483 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 IL1RL2Q9HB29 575 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 MRM3Q9HC36 420 aaKnown RBP13.49□□□□□ -0.25
SKA3-202ENST00000314759 GLOD4Q9HC38 313 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 GPRC5DQ9NZD1 345 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 HACD3Q9P035 362 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 MAP10Q9P2G4 905 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 GIPC1O14908 333 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 PMPCBO75439 489 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 ANXA9O76027 345 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 KCNE1P15382 129 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 MYF6P23409 242 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 ACADVLP49748 655 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 MAPK10P53779 464 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 NME5P56597 212 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 C21orf59P57076 290 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 YBX1P67809 324 aaKnown RBP13.49□□□□□ -0.25
SKA3-202ENST00000314759 ZNF829Q3KNS6 432 aaPredicted RBP13.49□□□□□ -0.25
SKA3-202ENST00000314759 MAP7D1Q3KQU3 841 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 AARS2Q5JTZ9 985 aaKnown RBP13.49□□□□□ -0.25
SKA3-202ENST00000314759 TBCELQ5QJ74 424 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 INTS11Q5TA45 600 aaKnown RBP13.49□□□□□ -0.25
SKA3-202ENST00000314759 RWDD4Q6NW29 188 aaKnown RBP13.49□□□□□ -0.25
SKA3-202ENST00000314759 DCLRE1AQ6PJP8 1040 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 TMEM26Q6ZUK4 368 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 ERO1BQ86YB8 467 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 CAMK1DQ8IU85 385 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 SPPL2CQ8IUH8 684 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 DQX1Q8TE96 717 aaKnown RBP13.49□□□□□ -0.25
SKA3-202ENST00000314759 ANKRD49Q8WVL7 239 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 ABHD8Q96I13 439 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 PPP1R10Q96QC0 940 aaKnown RBP13.49□□□□□ -0.25
SKA3-202ENST00000314759 NEURL2Q9BR09 285 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 GPATCH1Q9BRR8 931 aaKnown RBP13.49□□□□□ -0.25
SKA3-202ENST00000314759 ADI1Q9BV57 179 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 MUC3BQ9H195 1237 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 CNGB3Q9NQW8 809 aa13.49□□□□□ -0.25
SKA3-202ENST00000314759 PTBP2Q9UKA9 531 aaKnown RBP13.49□□□□□ -0.25
SKA3-202ENST00000314759 GABRDO14764 452 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 ALDH2P05091 517 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 INHBBP09529 407 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 LTA4HP09960 611 aaKnown RBP13.48□□□□□ -0.25
SKA3-202ENST00000314759 GPX3P22352 226 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 KCNC1P48547 511 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 GALNT1Q10472 559 aaPredicted RBP13.48□□□□□ -0.25
SKA3-202ENST00000314759 MERTKQ12866 999 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 MTA1Q13330 715 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 SEPT6Q14141 434 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 XKR4Q5GH76 650 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 BHLHA9Q7RTU4 235 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 PACRGLQ8N7B6 248 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 ARRDC4Q8NCT1 418 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 EMID1Q96A84 441 aaPredicted RBP13.48□□□□□ -0.25
SKA3-202ENST00000314759 ZUFSPQ96AP4 578 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 ROPN1LQ96C74 230 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 AGPAT4Q9NRZ5 378 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 EGFL7Q9UHF1 273 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 CDH7Q9ULB5 785 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 PIN4Q9Y237 131 aaKnown RBP13.48□□□□□ -0.25
SKA3-202ENST00000314759 CORINQ9Y5Q5 1042 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 TRIM64A6NGJ6 449 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 UNCXA6NJT0 531 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 TPST1O60507 370 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 F9P00740 461 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 DARSP14868 501 aaKnown RBP13.48□□□□□ -0.25
SKA3-202ENST00000314759 PAMP19021 973 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 CCNCP24863 283 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 KIAA0930Q6ICG6 404 aaPredicted RBP13.48□□□□□ -0.25
SKA3-202ENST00000314759 ARHGAP12Q8IWW6 846 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 PTCD2Q8WV60 388 aaKnown RBP13.48□□□□□ -0.25
SKA3-202ENST00000314759 TMEM40Q8WWA1 233 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 BORCS5Q969J3 196 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 RHOBTB2Q9BYZ6 727 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 CACNG4Q9UBN1 327 aa13.48□□□□□ -0.25
SKA3-202ENST00000314759 MRPL42Q9Y6G3 142 aaKnown RBP13.48□□□□□ -0.25
SKA3-202ENST00000314759 FNDC1Q4ZHG4 1894 aaPredicted RBP13.48□□□□□ -0.25
SKA3-202ENST00000314759 MYLKQ15746 1914 aa13.47□□□□□ -0.25
SKA3-202ENST00000314759 DHRS12A0PJE2 317 aa13.47□□□□□ -0.25
SKA3-202ENST00000314759 ZNF701M0R085 212 aaPredicted RBP13.47□□□□□ -0.25
SKA3-202ENST00000314759 BCAP31P51572 246 aa13.47□□□□□ -0.25
SKA3-202ENST00000314759 ZNF33AQ06730 810 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms