RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 C2CD4AQ8NCU7 369 aaPredicted RBP17.58■□□□□ 0.4
KRT28-201ENST00000306658 OR4K2Q8NGD2 314 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 CENPTQ96BT3 561 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 CDKN2AIPNLQ96HQ2 116 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 LRIG1Q96JA1 1093 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 KLF6Q99612 283 aaPredicted RBP17.58■□□□□ 0.4
KRT28-201ENST00000306658 GPR63Q9BZJ6 419 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 PSD3Q9NYI0 1048 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 GGT7Q9UJ14 662 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 FBXO5Q9UKT4 447 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 ZNF711Q9Y462 761 aa17.58■□□□□ 0.4
KRT28-201ENST00000306658 SZT2Q5T011 3432 aa17.57■□□□□ 0.4
KRT28-201ENST00000306658 ARNTLO00327 626 aa17.57■□□□□ 0.4
KRT28-201ENST00000306658 TYROBPO43914 113 aa17.57■□□□□ 0.4
KRT28-201ENST00000306658 RFPL1O75677 317 aa17.57■□□□□ 0.4
KRT28-201ENST00000306658 AHSGP02765 367 aa17.57■□□□□ 0.4
KRT28-201ENST00000306658 UGT2B4P06133 528 aa17.57■□□□□ 0.4
KRT28-201ENST00000306658 GRIA2P42262 883 aa17.57■□□□□ 0.4
KRT28-201ENST00000306658 SLC1A2P43004 574 aa17.57■□□□□ 0.4
KRT28-201ENST00000306658 PPARDQ03181 441 aa17.57■□□□□ 0.4
KRT28-201ENST00000306658 ILF2Q12905 390 aaKnown RBP17.57■□□□□ 0.4
KRT28-201ENST00000306658 CTBP1Q13363 440 aa17.57■□□□□ 0.4
KRT28-201ENST00000306658 FNDC3BQ53EP0 1204 aaKnown RBP17.57■□□□□ 0.4
KRT28-201ENST00000306658 FSTL4Q6MZW2 842 aa17.57■□□□□ 0.4
KRT28-201ENST00000306658 MRNIPQ6NTE8 343 aa17.57■□□□□ 0.4
KRT28-201ENST00000306658 SH2D5Q6ZV89 423 aa17.57■□□□□ 0.4
KRT28-201ENST00000306658 DENND6AQ8IWF6 608 aa17.57■□□□□ 0.4
KRT28-201ENST00000306658 OTUD6BQ8N6M0 293 aa17.57■□□□□ 0.4
KRT28-201ENST00000306658 ANKRD42Q8N9B4 389 aa17.57■□□□□ 0.4
KRT28-201ENST00000306658 ACMSDQ8TDX5 336 aa17.57■□□□□ 0.4
KRT28-201ENST00000306658 VOPP1Q96AW1 172 aa17.57■□□□□ 0.4
KRT28-201ENST00000306658 SGSM3Q96HU1 749 aa17.57■□□□□ 0.4
KRT28-201ENST00000306658 SMIM14Q96QK8 99 aa17.57■□□□□ 0.4
KRT28-201ENST00000306658 OSBPL1AQ9BXW6 950 aa17.57■□□□□ 0.4
KRT28-201ENST00000306658 RHOJQ9H4E5 214 aa17.57■□□□□ 0.4
KRT28-201ENST00000306658 PKP3Q9Y446 797 aa17.57■□□□□ 0.4
KRT28-201ENST00000306658 SOX1O00570 391 aaPredicted RBP17.56■□□□□ 0.4
KRT28-201ENST00000306658 ZWINTO95229 277 aa17.56■□□□□ 0.4
KRT28-201ENST00000306658 KAT7O95251 611 aa17.56■□□□□ 0.4
KRT28-201ENST00000306658 GOT2P00505 430 aaKnown RBP17.56■□□□□ 0.4
KRT28-201ENST00000306658 ALPIP09923 528 aa17.56■□□□□ 0.4
KRT28-201ENST00000306658 SP100P23497 879 aaPredicted RBP17.56■□□□□ 0.4
KRT28-201ENST00000306658 HMGCLP35914 325 aa17.56■□□□□ 0.4
KRT28-201ENST00000306658 GNGT1P63211 74 aa17.56■□□□□ 0.4
KRT28-201ENST00000306658 PTPRCAPQ14761 206 aa17.56■□□□□ 0.4
KRT28-201ENST00000306658 TTC19Q6DKK2 380 aaPredicted RBP17.56■□□□□ 0.4
KRT28-201ENST00000306658 BRAT1Q6PJG6 821 aa17.56■□□□□ 0.4
KRT28-201ENST00000306658 USP45Q70EL2 814 aa17.56■□□□□ 0.4
KRT28-201ENST00000306658 GALNT7Q86SF2 657 aa17.56■□□□□ 0.4
KRT28-201ENST00000306658 ZC3HC1Q86WB0 502 aaKnown RBP17.56■□□□□ 0.4
KRT28-201ENST00000306658 TTC30BQ8N4P2 665 aa17.56■□□□□ 0.4
KRT28-201ENST00000306658 GPR150Q8NGU9 434 aa17.56■□□□□ 0.4
KRT28-201ENST00000306658 OR4L1Q8NH43 312 aa17.56■□□□□ 0.4
KRT28-201ENST00000306658 CSGALNACT1Q8TDX6 532 aa17.56■□□□□ 0.4
KRT28-201ENST00000306658 SCRN2Q96FV2 425 aa17.56■□□□□ 0.4
KRT28-201ENST00000306658 VPS39Q96JC1 886 aa17.56■□□□□ 0.4
KRT28-201ENST00000306658 C19orf43Q9BQ61 176 aa17.56■□□□□ 0.4
KRT28-201ENST00000306658 MCMBPQ9BTE3 642 aa17.56■□□□□ 0.4
KRT28-201ENST00000306658 ZFYVE1Q9HBF4 777 aa17.56■□□□□ 0.4
KRT28-201ENST00000306658 IL36AQ9UHA7 158 aa17.56■□□□□ 0.4
KRT28-201ENST00000306658 PPIL1Q9Y3C6 166 aa17.56■□□□□ 0.4
KRT28-201ENST00000306658 KIAA1549LQ6ZVL6 1849 aa17.56■□□□□ 0.4
KRT28-201ENST00000306658 CCDC162PA2VCL2 907 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 CAPN8A6NHC0 703 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 CCL22O00626 93 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 COPEO14579 308 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 CD3EAPO15446 510 aaKnown RBP17.55■□□□□ 0.4
KRT28-201ENST00000306658 SHOX2O60902 331 aaPredicted RBP17.55■□□□□ 0.4
KRT28-201ENST00000306658 SLC4A1P02730 911 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 APODP05090 189 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 KCNA5P22460 613 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 NFKBIAP25963 317 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 TYK2P29597 1187 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 HNF1BP35680 557 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 CD151P48509 253 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 CCT5P48643 541 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 POLD2P49005 469 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 MPP2Q14168 576 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 E2F5Q15329 346 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 SEPT7Q16181 437 aaKnown RBP17.55■□□□□ 0.4
KRT28-201ENST00000306658 AFTPHQ6ULP2 937 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 SDCCAG8Q86SQ7 713 aaPredicted RBP17.55■□□□□ 0.4
KRT28-201ENST00000306658 CILP2Q8IUL8 1156 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 DCLK2Q8N568 766 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 GRIN3AQ8TCU5 1115 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 ATXN7L3BQ96GX2 97 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 APOPT1Q96IL0 206 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 KLHL32Q96NJ5 620 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 LYSMD1Q96S90 227 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 IQCGQ9H095 443 aaKnown RBP17.55■□□□□ 0.4
KRT28-201ENST00000306658 SUDS3Q9H7L9 328 aaPredicted RBP17.55■□□□□ 0.4
KRT28-201ENST00000306658 CATSPERZQ9NTU4 200 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 WASF2Q9Y6W5 498 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 C1orf232A0A0U1RR37 186 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 EDDM13A0A1B0GTR0 161 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 GRXCR2A6NFK2 248 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 TPP1O14773 563 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 TM9SF1O15321 606 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 LEFTY1O75610 366 aa17.55■□□□□ 0.4
KRT28-201ENST00000306658 ALDOAP04075 364 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms