RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 LEF1Q9UJU2 399 aaPredicted RBP13.43□□□□□ -0.26
TRIM56-201ENST00000306085 TCOF1Q13428 1488 aaKnown RBP13.43□□□□□ -0.26
TRIM56-201ENST00000306085 COX4I1P13073 169 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 ACTL9Q8TC94 416 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 DCLK3Q9C098 648 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 C11orf16Q9NQ32 467 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 SEMA3GQ9NS98 782 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 CDC42BPGQ6DT37 1551 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 MDFIC2A0A1B0GVS7 189 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 CSH1P0DML2 217 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 CSH2P0DML3 217 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 PFKPQ01813 784 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 SUSD4Q5VX71 490 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 KCTD8Q6ZWB6 473 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 STK40Q8N2I9 435 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 SEMA4AQ9H3S1 761 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 XPNPEP3Q9NQH7 507 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 FAM86B1E9PN63 330 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 SSTR1P30872 391 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 TBX2Q13207 712 aaPredicted RBP13.43□□□□□ -0.26
TRIM56-201ENST00000306085 C5orf34Q96MH7 638 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 BTRCQ9Y297 605 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 CAMTA2O94983 1202 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 VTNP04004 478 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 FAM228BP0C875 321 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 CXCR2P25025 360 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 NAA20P61599 178 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 SNAP47Q5SQN1 464 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 AGAP11Q8TF27 550 aa13.43□□□□□ -0.26
TRIM56-201ENST00000306085 FDX1P10109 184 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 MYBL2P10244 700 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 ITGA7Q13683 1181 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 TCEAL3Q969E4 200 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 ATP13A1Q9HD20 1204 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 EGFL7Q9UHF1 273 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 PCDHA3Q9Y5H8 950 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 STMND1H3BQB6 276 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 SLC30A4O14863 429 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 THP07101 528 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 ABCG1P45844 678 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 CSTF1Q05048 431 aaKnown RBP13.42□□□□□ -0.26
TRIM56-201ENST00000306085 ILF3Q12906 894 aaKnown RBP eCLIP13.42□□□□□ -0.26
TRIM56-201ENST00000306085 AMIGO2Q86SJ2 522 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 ZBTB8BQ8NAP8 495 aaPredicted RBP13.42□□□□□ -0.26
TRIM56-201ENST00000306085 VANGL1Q8TAA9 524 aaPredicted RBP13.42□□□□□ -0.26
TRIM56-201ENST00000306085 CD101Q93033 1021 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 MALT1Q9UDY8 824 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 CFAP74Q9C0B2 1584 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 SCAMP1O15126 338 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 RRM1P23921 792 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 AQP1P29972 269 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 BCL2L1Q07817 233 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 GRHL2Q6ISB3 625 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 GHDCQ8N2G8 530 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 BRSK1Q8TDC3 778 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 ZNF649Q9BS31 505 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 ACAT2Q9BWD1 397 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 PADI2Q9Y2J8 665 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 TRIM64CA6NLI5 447 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 OPLAHO14841 1288 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 GSTT2BP0CG30 244 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 ZNF157P51786 506 aaPredicted RBP13.42□□□□□ -0.26
TRIM56-201ENST00000306085 DLG4P78352 724 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 MFSD10Q14728 455 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 SPIN3Q5JUX0 258 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 ACTRT1Q8TDG2 376 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 HBP1O60381 514 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 MAGEA11P43364 429 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 CDK7P50613 346 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 AASSQ9UDR5 926 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 CNOT6Q9ULM6 557 aaKnown RBP13.42□□□□□ -0.26
TRIM56-201ENST00000306085 MINPP1Q9UNW1 487 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 CCRL2O00421 344 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 RPL3P39023 403 aaKnown RBP13.42□□□□□ -0.26
TRIM56-201ENST00000306085 LGI2Q8N0V4 545 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 HTR3CQ8WXA8 447 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 TEFMQ96QE5 360 aaKnown RBP13.42□□□□□ -0.26
TRIM56-201ENST00000306085 AGPAT3Q9NRZ7 376 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 SLC26A4O43511 780 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 LINGO3P0C6S8 592 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 MANFP55145 182 aaKnown RBP13.42□□□□□ -0.26
TRIM56-201ENST00000306085 ZCCHC12Q6PEW1 402 aa13.42□□□□□ -0.26
TRIM56-201ENST00000306085 H3BQF6 201 aa13.41□□□□□ -0.26
TRIM56-201ENST00000306085 PLK4O00444 970 aa13.41□□□□□ -0.26
TRIM56-201ENST00000306085 PER2O15055 1255 aa13.41□□□□□ -0.26
TRIM56-201ENST00000306085 UGT2B11O75310 529 aa13.41□□□□□ -0.26
TRIM56-201ENST00000306085 PAPSS2O95340 614 aaPredicted RBP13.41□□□□□ -0.26
TRIM56-201ENST00000306085 AXLP30530 894 aa13.41□□□□□ -0.26
TRIM56-201ENST00000306085 IFI35P80217 286 aaPredicted RBP13.41□□□□□ -0.26
TRIM56-201ENST00000306085 SLITRK4Q8IW52 837 aa13.41□□□□□ -0.26
TRIM56-201ENST00000306085 CXorf40BQ96DE9 158 aa13.41□□□□□ -0.26
TRIM56-201ENST00000306085 MYO5CQ9NQX4 1742 aa13.41□□□□□ -0.26
TRIM56-201ENST00000306085 ARHGEF40Q8TER5 1519 aa13.41□□□□□ -0.26
TRIM56-201ENST00000306085 DPYSQ14117 519 aa13.41□□□□□ -0.26
TRIM56-201ENST00000306085 GPR65Q8IYL9 337 aa13.41□□□□□ -0.26
TRIM56-201ENST00000306085 OR10G6Q8NH81 332 aa13.41□□□□□ -0.26
TRIM56-201ENST00000306085 ACOT12Q8WYK0 555 aa13.41□□□□□ -0.26
TRIM56-201ENST00000306085 KDM6AO15550 1401 aaPredicted RBP13.41□□□□□ -0.26
TRIM56-201ENST00000306085 ERAL1O75616 437 aaKnown RBP13.41□□□□□ -0.26
TRIM56-201ENST00000306085 VDRP11473 427 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms