RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 AXIN1O15169 862 aa27.2■■□□□ 1.94
HDAC3-201ENST00000305264 CCDC38Q502W7 563 aa27.2■■□□□ 1.94
HDAC3-201ENST00000305264 GLT6D1Q7Z4J2 308 aa27.2■■□□□ 1.94
HDAC3-201ENST00000305264 GSPT2Q8IYD1 628 aaKnown RBP27.2■■□□□ 1.94
HDAC3-201ENST00000305264 FRMD8Q9BZ67 464 aaPredicted RBP27.2■■□□□ 1.94
HDAC3-201ENST00000305264 BFARQ9NZS9 450 aa27.2■■□□□ 1.94
HDAC3-201ENST00000305264 WDFY4Q6ZS81 3184 aa27.19■■□□□ 1.94
HDAC3-201ENST00000305264 NEMP1O14524 444 aa27.19■■□□□ 1.94
HDAC3-201ENST00000305264 AP1G1O43747 822 aa27.19■■□□□ 1.94
HDAC3-201ENST00000305264 CYP2A6P11509 494 aaPredicted RBP27.19■■□□□ 1.94
HDAC3-201ENST00000305264 NFKBIAP25963 317 aa27.19■■□□□ 1.94
HDAC3-201ENST00000305264 HOXA6P31267 233 aa27.19■■□□□ 1.94
HDAC3-201ENST00000305264 ARL4CP56559 192 aa27.19■■□□□ 1.94
HDAC3-201ENST00000305264 CNGA3Q16281 694 aa27.19■■□□□ 1.94
HDAC3-201ENST00000305264 PDIK1LQ8N165 341 aa27.19■■□□□ 1.94
HDAC3-201ENST00000305264 ARL5AQ9Y689 179 aa27.19■■□□□ 1.94
HDAC3-201ENST00000305264 AP3B1O00203 1094 aa27.18■■□□□ 1.94
HDAC3-201ENST00000305264 PPFIA2O75334 1257 aa27.18■■□□□ 1.94
HDAC3-201ENST00000305264 ZNF217O75362 1048 aa27.18■■□□□ 1.94
HDAC3-201ENST00000305264 CLDN7O95471 211 aa27.18■■□□□ 1.94
HDAC3-201ENST00000305264 MYBL2P10244 700 aa27.18■■□□□ 1.94
HDAC3-201ENST00000305264 CSTF1Q05048 431 aaKnown RBP27.18■■□□□ 1.94
HDAC3-201ENST00000305264 DHX9Q08211 1270 aaKnown RBP27.18■■□□□ 1.94
HDAC3-201ENST00000305264 SEPT6Q14141 434 aa27.18■■□□□ 1.94
HDAC3-201ENST00000305264 EID2BQ96D98 161 aa27.18■■□□□ 1.94
HDAC3-201ENST00000305264 FAM129AQ9BZQ8 928 aa27.18■■□□□ 1.94
HDAC3-201ENST00000305264 BTBD1Q9H0C5 482 aa27.18■■□□□ 1.94
HDAC3-201ENST00000305264 PRR23AA6NEV1 266 aa27.18■■□□□ 1.94
HDAC3-201ENST00000305264 NPY2RP49146 381 aa27.18■■□□□ 1.94
HDAC3-201ENST00000305264 MAP7D1Q3KQU3 841 aa27.18■■□□□ 1.94
HDAC3-201ENST00000305264 BBS9Q3SYG4 887 aa27.18■■□□□ 1.94
HDAC3-201ENST00000305264 TTC30BQ8N4P2 665 aa27.18■■□□□ 1.94
HDAC3-201ENST00000305264 BRSK1Q8TDC3 778 aa27.18■■□□□ 1.94
HDAC3-201ENST00000305264 RUBCNQ92622 972 aa27.18■■□□□ 1.94
HDAC3-201ENST00000305264 WDR83Q9BRX9 315 aaKnown RBP27.18■■□□□ 1.94
HDAC3-201ENST00000305264 IL22Q9GZX6 179 aa27.18■■□□□ 1.94
HDAC3-201ENST00000305264 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP27.18■■□□□ 1.94
HDAC3-201ENST00000305264 HACD3Q9P035 362 aa27.18■■□□□ 1.94
HDAC3-201ENST00000305264 INVSQ9Y283 1065 aa27.18■■□□□ 1.94
HDAC3-201ENST00000305264 IGHV1OR15-9A0A0B4J2B8 117 aa27.17■■□□□ 1.94
HDAC3-201ENST00000305264 FAM47DPA6NHR8 397 aa27.17■■□□□ 1.94
HDAC3-201ENST00000305264 BUD23O43709 281 aaKnown RBP27.17■■□□□ 1.94
HDAC3-201ENST00000305264 GPR37L1O60883 481 aa27.17■■□□□ 1.94
HDAC3-201ENST00000305264 FNTBP49356 437 aa27.17■■□□□ 1.94
HDAC3-201ENST00000305264 VSNL1P62760 191 aa27.17■■□□□ 1.94
HDAC3-201ENST00000305264 ELF2Q15723 593 aa27.17■■□□□ 1.94
HDAC3-201ENST00000305264 TMEM52BQ4KMG9 183 aa27.17■■□□□ 1.94
HDAC3-201ENST00000305264 TOE1Q96GM8 510 aaKnown RBP27.17■■□□□ 1.94
HDAC3-201ENST00000305264 SIGLEC10Q96LC7 697 aa27.17■■□□□ 1.94
HDAC3-201ENST00000305264 ZFYVE1Q9HBF4 777 aa27.17■■□□□ 1.94
HDAC3-201ENST00000305264 KCTD3Q9Y597 815 aa27.17■■□□□ 1.94
HDAC3-201ENST00000305264 TRPM6Q9BX84 2022 aa27.17■■□□□ 1.94
HDAC3-201ENST00000305264 DOCK9Q9BZ29 2069 aa27.17■■□□□ 1.94
HDAC3-201ENST00000305264 CCDC78A2IDD5 438 aa27.17■■□□□ 1.94
HDAC3-201ENST00000305264 PRR33A8MZF0 331 aa27.17■■□□□ 1.94
HDAC3-201ENST00000305264 LDB2O43679 373 aa27.17■■□□□ 1.94
HDAC3-201ENST00000305264 PCDH8O95206 1070 aa27.17■■□□□ 1.94
HDAC3-201ENST00000305264 ARHGEF7Q14155 803 aa27.17■■□□□ 1.94
HDAC3-201ENST00000305264 HP1BP3Q5SSJ5 553 aaPredicted RBP27.17■■□□□ 1.94
HDAC3-201ENST00000305264 LIPIQ6XZB0 460 aa27.17■■□□□ 1.94
HDAC3-201ENST00000305264 FMO2Q99518 471 aa27.17■■□□□ 1.94
HDAC3-201ENST00000305264 TRIM56Q9BRZ2 755 aaKnown RBP27.17■■□□□ 1.94
HDAC3-201ENST00000305264 GPR63Q9BZJ6 419 aa27.17■■□□□ 1.94
HDAC3-201ENST00000305264 TRABDQ9H4I3 376 aa27.17■■□□□ 1.94
HDAC3-201ENST00000305264 SGK2Q9HBY8 427 aa27.17■■□□□ 1.94
HDAC3-201ENST00000305264 ZNF318Q5VUA4 2279 aa27.16■■□□□ 1.94
HDAC3-201ENST00000305264 SDR42E2A6NKP2 422 aa27.16■■□□□ 1.94
HDAC3-201ENST00000305264 TSPAN6O43657 245 aa27.16■■□□□ 1.94
HDAC3-201ENST00000305264 ELFN1P0C7U0 828 aa27.16■■□□□ 1.94
HDAC3-201ENST00000305264 TNFRSF8P28908 595 aa27.16■■□□□ 1.94
HDAC3-201ENST00000305264 CD6P30203 668 aa27.16■■□□□ 1.94
HDAC3-201ENST00000305264 LIG3P49916 1009 aa27.16■■□□□ 1.94
HDAC3-201ENST00000305264 PTSQ03393 145 aa27.16■■□□□ 1.94
HDAC3-201ENST00000305264 FASTKD3Q14CZ7 662 aaKnown RBP27.16■■□□□ 1.94
HDAC3-201ENST00000305264 DNAJC21Q5F1R6 531 aaKnown RBP27.16■■□□□ 1.94
HDAC3-201ENST00000305264 CCDC25Q86WR0 208 aa27.16■■□□□ 1.94
HDAC3-201ENST00000305264 GPR161Q8N6U8 529 aaKnown RBP27.16■■□□□ 1.94
HDAC3-201ENST00000305264 SRPK1Q96SB4 655 aaKnown RBP27.16■■□□□ 1.94
HDAC3-201ENST00000305264 WSB2Q9NYS7 404 aaPredicted RBP27.16■■□□□ 1.94
HDAC3-201ENST00000305264 TCAF1Q9Y4C2 921 aa27.16■■□□□ 1.94
HDAC3-201ENST00000305264 E7ESA3 106 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 MMP20O60882 483 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 C1SP09871 688 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 PDIA2Q13087 525 aaKnown RBP27.15■■□□□ 1.94
HDAC3-201ENST00000305264 PTPRCAPQ14761 206 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 TAF1AQ15573 450 aaPredicted RBP27.15■■□□□ 1.94
HDAC3-201ENST00000305264 SEL1L3Q68CR1 1132 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 CASC4Q6P4E1 433 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 CXorf40AQ8TE69 158 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 RANBP9Q96S59 729 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 PREBQ9HCU5 417 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 CHRAC1Q9NRG0 131 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 MTRF1LQ9UGC7 380 aaKnown RBP27.15■■□□□ 1.94
HDAC3-201ENST00000305264 TBC1D3DA0A087WVF3 549 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 TBC1D3IA0A087WXS9 549 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 TBC1D3EA0A087X179 549 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 TBC1D3KA0A087X1G2 549 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 TBC1D3FA6NER0 549 aaPredicted RBP27.15■■□□□ 1.94
HDAC3-201ENST00000305264 GOLGA8CPA6NN73 597 aa27.15■■□□□ 1.94
HDAC3-201ENST00000305264 TBC1D3LB9A6J9 549 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms