RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 MARC1Q5VT66 337 aa16.72■□□□□ 0.27
TRAPPC1-201ENST00000303731 NDUFAF2Q8N183 169 aa16.72■□□□□ 0.27
TRAPPC1-201ENST00000303731 PCDH19Q8TAB3 1148 aa16.72■□□□□ 0.27
TRAPPC1-201ENST00000303731 FAM71BQ8TC56 605 aa16.72■□□□□ 0.27
TRAPPC1-201ENST00000303731 CPLX3Q8WVH0 158 aa16.72■□□□□ 0.27
TRAPPC1-201ENST00000303731 CCDC3Q9BQI4 270 aa16.72■□□□□ 0.27
TRAPPC1-201ENST00000303731 WDR26Q9H7D7 661 aa16.72■□□□□ 0.27
TRAPPC1-201ENST00000303731 ETNK2Q9NVF9 386 aa16.72■□□□□ 0.27
TRAPPC1-201ENST00000303731 PHTF1Q9UMS5 762 aa16.72■□□□□ 0.27
TRAPPC1-201ENST00000303731 COL27A1Q8IZC6 1860 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 FASNP49327 2511 aaKnown RBP16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 TMX2-CTNND1H3BSU7 103 aa16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 GYPCP04921 128 aa16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 TCF4P15884 667 aa16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 CES1P23141 567 aa16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 VIPR1P32241 457 aa16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 MMP13P45452 471 aa16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 UCNP55089 124 aa16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 ACOX1Q15067 660 aa16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 PERM1Q5SV97 790 aa16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 CCDC122Q5T0U0 273 aa16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 RD3Q7Z3Z2 195 aa16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 MAP7D3Q8IWC1 876 aa16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 TP53INP2Q8IXH6 220 aa16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 PLA2G15Q8NCC3 412 aa16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 ZNF564Q8TBZ8 553 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 PDCD6IPQ8WUM4 868 aaKnown RBP16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 FUBP1Q96AE4 644 aaKnown RBP16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 NUS1Q96E22 293 aa16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 HIC2Q96JB3 615 aa16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 UBL7Q96S82 380 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 LGMNQ99538 433 aa16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 UVRAGQ9P2Y5 699 aa16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 GULP1Q9UBP9 304 aa16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 B4GALT6Q9UBX8 382 aa16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 AMACRQ9UHK6 382 aa16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 GPR34Q9UPC5 381 aa16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 PCDHGA8Q9Y5G5 932 aa16.71■□□□□ 0.27
TRAPPC1-201ENST00000303731 MYCLP1P12525 358 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 ITPKBP27987 946 aa16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 RBMS1P29558 406 aaKnown RBP16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 HNRNPH3P31942 346 aaKnown RBP16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 TRIM14Q14142 442 aa16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 PDK2Q15119 407 aa16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 SOWAHCQ53LP3 525 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 BROXQ5VW32 411 aa16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 TXNRD3NBQ6F5E7 133 aa16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 TIGD7Q6NT04 549 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 PNCKQ6P2M8 343 aa16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 USP45Q70EL2 814 aa16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 KYQ8NBH2 561 aa16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 WDR36Q8NI36 951 aaKnown RBP16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 FATE1Q969F0 183 aa16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 CCDC97Q96F63 343 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 PDXPQ96GD0 296 aa16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 COQ10AQ96MF6 247 aa16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 ZNF670Q9BS34 389 aa16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 POLR1EQ9GZS1 481 aaKnown RBP16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 PRORYQ9H606 182 aa16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 NOD2Q9HC29 1040 aa16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 PHPT1Q9NRX4 125 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 IFNKQ9P0W0 207 aa16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 PCDHGC4Q9Y5F7 938 aa16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 ENTPD2Q9Y5L3 495 aa16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 BPTFQ12830 3046 aa16.7■□□□□ 0.26
TRAPPC1-201ENST00000303731 EIF4E1BA6NMX2 242 aaKnown RBP16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 NTN3O00634 580 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 HEXIM1O94992 359 aaKnown RBP16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 CELA2BP08218 269 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 KRT7P08729 469 aa16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 H2AFZP0C0S5 128 aa16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 PNLIPP16233 465 aa16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 GM2AP17900 193 aa16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 TEAD1P28347 426 aa16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 CASP14P31944 242 aa16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 SSR1P43307 286 aaKnown RBP16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 EIF3IQ13347 325 aaKnown RBP16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 PEX6Q13608 980 aa16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 ARHGEF7Q14155 803 aa16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 CNGA3Q16281 694 aa16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 C3orf38Q5JPI3 329 aa16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 ARMC12Q5T9G4 340 aa16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 H2AFVQ71UI9 128 aa16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 PGBD5Q8N414 524 aa16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 ARL14Q8N4G2 192 aa16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 TEX26Q8N6G2 289 aa16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 CTNNBL1Q8WYA6 563 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 SCRN2Q96FV2 425 aa16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 ATXN7L3BQ96GX2 97 aa16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 BTBD6Q96KE9 485 aa16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 MCCC1Q96RQ3 725 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 DPH1Q9BZG8 443 aa16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 FGF22Q9HCT0 170 aa16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 CTTNBP2NLQ9P2B4 639 aa16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 DNPEPQ9ULA0 475 aa16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 SATB2Q9UPW6 733 aa16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 PPIL1Q9Y3C6 166 aa16.69■□□□□ 0.26
TRAPPC1-201ENST00000303731 BAHCC1Q9P281 2608 aa16.68■□□□□ 0.26
TRAPPC1-201ENST00000303731 CCDC187A0A096LP49 1063 aa16.68■□□□□ 0.26
TRAPPC1-201ENST00000303731 TMEM202A6NGA9 273 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms