RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 TRIM23P36406 574 aa18.3■□□□□ 0.52
TMEM88-201ENST00000301599 ARSEP51690 589 aa18.3■□□□□ 0.52
TMEM88-201ENST00000301599 MMRN1Q13201 1228 aa18.3■□□□□ 0.52
TMEM88-201ENST00000301599 TRIM14Q14142 442 aa18.3■□□□□ 0.52
TMEM88-201ENST00000301599 PDK2Q15119 407 aa18.3■□□□□ 0.52
TMEM88-201ENST00000301599 SLC18A3Q16572 532 aa18.3■□□□□ 0.52
TMEM88-201ENST00000301599 ATP13A4Q4VNC1 1196 aa18.3■□□□□ 0.52
TMEM88-201ENST00000301599 SPECC1LQ69YQ0 1117 aa18.3■□□□□ 0.52
TMEM88-201ENST00000301599 WDR48Q8TAF3 677 aa18.3■□□□□ 0.52
TMEM88-201ENST00000301599 FUBP1Q96AE4 644 aaKnown RBP18.3■□□□□ 0.52
TMEM88-201ENST00000301599 PCDHB1Q9Y5F3 818 aa18.3■□□□□ 0.52
TMEM88-201ENST00000301599 DGKBQ9Y6T7 804 aa18.3■□□□□ 0.52
TMEM88-201ENST00000301599 TNFRSF10CO14798 259 aa18.29■□□□□ 0.52
TMEM88-201ENST00000301599 TLX3O43711 291 aaPredicted RBP18.29■□□□□ 0.52
TMEM88-201ENST00000301599 CPP00450 1065 aa18.29■□□□□ 0.52
TMEM88-201ENST00000301599 CD48P09326 243 aa18.29■□□□□ 0.52
TMEM88-201ENST00000301599 KRT10P13645 584 aa18.29■□□□□ 0.52
TMEM88-201ENST00000301599 CES1P23141 567 aa18.29■□□□□ 0.52
TMEM88-201ENST00000301599 VIPR1P32241 457 aa18.29■□□□□ 0.52
TMEM88-201ENST00000301599 LSSP48449 732 aa18.29■□□□□ 0.52
TMEM88-201ENST00000301599 KIAA1024LP59773 190 aa18.29■□□□□ 0.52
TMEM88-201ENST00000301599 MAXP61244 160 aa18.29■□□□□ 0.52
TMEM88-201ENST00000301599 ITKQ08881 620 aa18.29■□□□□ 0.52
TMEM88-201ENST00000301599 DPYSL3Q14195 570 aa18.29■□□□□ 0.52
TMEM88-201ENST00000301599 PAFAH1B3Q15102 231 aaKnown RBP18.29■□□□□ 0.52
TMEM88-201ENST00000301599 ISXQ2M1V0 245 aa18.29■□□□□ 0.52
TMEM88-201ENST00000301599 ANKRD20A8PQ5CZ79 823 aa18.29■□□□□ 0.52
TMEM88-201ENST00000301599 PNCKQ6P2M8 343 aa18.29■□□□□ 0.52
TMEM88-201ENST00000301599 NDUFAF2Q8N183 169 aa18.29■□□□□ 0.52
TMEM88-201ENST00000301599 CBARPQ8N350 705 aaPredicted RBP18.29■□□□□ 0.52
TMEM88-201ENST00000301599 TEX26Q8N6G2 289 aa18.29■□□□□ 0.52
TMEM88-201ENST00000301599 OR56A4Q8NGH8 313 aa18.29■□□□□ 0.52
TMEM88-201ENST00000301599 SCRN2Q96FV2 425 aa18.29■□□□□ 0.52
TMEM88-201ENST00000301599 COQ10AQ96MF6 247 aa18.29■□□□□ 0.52
TMEM88-201ENST00000301599 DNAJC7Q99615 494 aa18.29■□□□□ 0.52
TMEM88-201ENST00000301599 DEF6Q9H4E7 631 aa18.29■□□□□ 0.52
TMEM88-201ENST00000301599 GPR34Q9UPC5 381 aa18.29■□□□□ 0.52
TMEM88-201ENST00000301599 ZFYVE26Q68DK2 2539 aa18.28■□□□□ 0.52
TMEM88-201ENST00000301599 TCEA3O75764 348 aa18.28■□□□□ 0.52
TMEM88-201ENST00000301599 CELA2BP08218 269 aaPredicted RBP18.28■□□□□ 0.52
TMEM88-201ENST00000301599 KRT7P08729 469 aa18.28■□□□□ 0.52
TMEM88-201ENST00000301599 TPM1P09493 284 aa18.28■□□□□ 0.52
TMEM88-201ENST00000301599 GM2AP17900 193 aa18.28■□□□□ 0.52
TMEM88-201ENST00000301599 ABCG1P45844 678 aa18.28■□□□□ 0.52
TMEM88-201ENST00000301599 IFI16Q16666 785 aaKnown RBP18.28■□□□□ 0.52
TMEM88-201ENST00000301599 PERM1Q5SV97 790 aa18.28■□□□□ 0.52
TMEM88-201ENST00000301599 ARMC12Q5T9G4 340 aa18.28■□□□□ 0.52
TMEM88-201ENST00000301599 RBM44Q6ZP01 1051 aaKnown RBP18.28■□□□□ 0.52
TMEM88-201ENST00000301599 ARL10Q8N8L6 244 aa18.28■□□□□ 0.52
TMEM88-201ENST00000301599 PCDH19Q8TAB3 1148 aa18.28■□□□□ 0.52
TMEM88-201ENST00000301599 SNIP1Q8TAD8 396 aaKnown RBP18.28■□□□□ 0.52
TMEM88-201ENST00000301599 RBM15Q96T37 977 aaKnown RBP eCLIP18.28■□□□□ 0.52
TMEM88-201ENST00000301599 POLR1BQ9H9Y6 1135 aa18.28■□□□□ 0.52
TMEM88-201ENST00000301599 NT5MQ9NPB1 228 aa18.28■□□□□ 0.52
TMEM88-201ENST00000301599 HAUS2Q9NVX0 235 aa18.28■□□□□ 0.52
TMEM88-201ENST00000301599 SSU72P8A0A1W2PR75 194 aa18.27■□□□□ 0.52
TMEM88-201ENST00000301599 TMEM202A6NGA9 273 aa18.27■□□□□ 0.52
TMEM88-201ENST00000301599 MATN3O15232 486 aa18.27■□□□□ 0.52
TMEM88-201ENST00000301599 AKR1B10O60218 316 aa18.27■□□□□ 0.52
TMEM88-201ENST00000301599 HEXIM1O94992 359 aaKnown RBP18.27■□□□□ 0.52
TMEM88-201ENST00000301599 PGLSO95336 258 aa18.27■□□□□ 0.52
TMEM88-201ENST00000301599 MPOP05164 745 aa18.27■□□□□ 0.52
TMEM88-201ENST00000301599 CCNCP24863 283 aa18.27■□□□□ 0.52
TMEM88-201ENST00000301599 GJC1P36383 396 aa18.27■□□□□ 0.52
TMEM88-201ENST00000301599 GARSP41250 739 aaKnown RBP18.27■□□□□ 0.52
TMEM88-201ENST00000301599 GALNT2Q10471 571 aa18.27■□□□□ 0.52
TMEM88-201ENST00000301599 TRAF2Q12933 501 aa18.27■□□□□ 0.52
TMEM88-201ENST00000301599 CNGA3Q16281 694 aa18.27■□□□□ 0.52
TMEM88-201ENST00000301599 ASTE1Q2TB18 679 aaPredicted RBP18.27■□□□□ 0.52
TMEM88-201ENST00000301599 TBC1D25Q3MII6 688 aa18.27■□□□□ 0.52
TMEM88-201ENST00000301599 TIGD7Q6NT04 549 aaPredicted RBP18.27■□□□□ 0.52
TMEM88-201ENST00000301599 OR6C4Q8NGE1 309 aa18.27■□□□□ 0.52
TMEM88-201ENST00000301599 OR1E3Q8WZA6 343 aa18.27■□□□□ 0.52
TMEM88-201ENST00000301599 NUS1Q96E22 293 aa18.27■□□□□ 0.52
TMEM88-201ENST00000301599 ZNF578Q96N58 590 aaPredicted RBP18.27■□□□□ 0.52
TMEM88-201ENST00000301599 TSGA13Q96PP4 275 aa18.27■□□□□ 0.52
TMEM88-201ENST00000301599 SEMA3CQ99985 751 aa18.27■□□□□ 0.52
TMEM88-201ENST00000301599 ZNF670Q9BS34 389 aa18.27■□□□□ 0.52
TMEM88-201ENST00000301599 PACSIN1Q9BY11 444 aa18.27■□□□□ 0.52
TMEM88-201ENST00000301599 POLR1EQ9GZS1 481 aaKnown RBP18.27■□□□□ 0.52
TMEM88-201ENST00000301599 WDR26Q9H7D7 661 aa18.27■□□□□ 0.52
TMEM88-201ENST00000301599 AMACRQ9UHK6 382 aa18.27■□□□□ 0.52
TMEM88-201ENST00000301599 PPIL1Q9Y3C6 166 aa18.27■□□□□ 0.52
TMEM88-201ENST00000301599 RAI2Q9Y5P3 530 aa18.27■□□□□ 0.52
TMEM88-201ENST00000301599 ASXL3Q9C0F0 2248 aa18.26■□□□□ 0.51
TMEM88-201ENST00000301599 PSMD11O00231 422 aa18.26■□□□□ 0.51
TMEM88-201ENST00000301599 TMEM253P0C7T8 217 aa18.26■□□□□ 0.51
TMEM88-201ENST00000301599 ITPKBP27987 946 aa18.26■□□□□ 0.51
TMEM88-201ENST00000301599 TAS2R40P59535 323 aa18.26■□□□□ 0.51
TMEM88-201ENST00000301599 GABREP78334 506 aa18.26■□□□□ 0.51
TMEM88-201ENST00000301599 ARHGEF7Q14155 803 aa18.26■□□□□ 0.51
TMEM88-201ENST00000301599 ZFYVE27Q5T4F4 411 aa18.26■□□□□ 0.51
TMEM88-201ENST00000301599 DENND2CQ68D51 928 aa18.26■□□□□ 0.51
TMEM88-201ENST00000301599 NCBP2-AS2Q69YL0 99 aa18.26■□□□□ 0.51
TMEM88-201ENST00000301599 CRTC1Q6UUV9 634 aa18.26■□□□□ 0.51
TMEM88-201ENST00000301599 NYAP1Q6ZVC0 841 aa18.26■□□□□ 0.51
TMEM88-201ENST00000301599 USP45Q70EL2 814 aa18.26■□□□□ 0.51
TMEM88-201ENST00000301599 TAF8Q7Z7C8 310 aa18.26■□□□□ 0.51
TMEM88-201ENST00000301599 PIH1D2Q8WWB5 315 aa18.26■□□□□ 0.51
TMEM88-201ENST00000301599 MAML1Q92585 1016 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms