RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 UBDO15205 165 aa12.94□□□□□ -0.34
HIF3A-204ENST00000300862 DNAJA2O60884 412 aa12.94□□□□□ -0.34
HIF3A-204ENST00000300862 TRPA1O75762 1119 aa12.94□□□□□ -0.34
HIF3A-204ENST00000300862 S1PR4O95977 384 aa12.94□□□□□ -0.34
HIF3A-204ENST00000300862 PRSS56P0CW18 603 aa12.94□□□□□ -0.34
HIF3A-204ENST00000300862 PMLP29590 882 aa12.94□□□□□ -0.34
HIF3A-204ENST00000300862 CLCN5P51795 746 aa12.94□□□□□ -0.34
HIF3A-204ENST00000300862 KPNA2P52292 529 aaKnown RBP12.94□□□□□ -0.34
HIF3A-204ENST00000300862 CRHR2Q13324 411 aa12.94□□□□□ -0.34
HIF3A-204ENST00000300862 HERC3Q15034 1050 aa12.94□□□□□ -0.34
HIF3A-204ENST00000300862 FBXO48Q5FWF7 155 aa12.94□□□□□ -0.34
HIF3A-204ENST00000300862 MAP3K21Q5TCX8 1036 aa12.94□□□□□ -0.34
HIF3A-204ENST00000300862 KIAA0408Q6ZU52 694 aa12.94□□□□□ -0.34
HIF3A-204ENST00000300862 MON1AQ86VX9 555 aa12.94□□□□□ -0.34
HIF3A-204ENST00000300862 NUP93Q8N1F7 819 aa12.94□□□□□ -0.34
HIF3A-204ENST00000300862 PTERQ96BW5 349 aa12.94□□□□□ -0.34
HIF3A-204ENST00000300862 UBXN10Q96LJ8 280 aa12.94□□□□□ -0.34
HIF3A-204ENST00000300862 CNBD2Q96M20 576 aa12.94□□□□□ -0.34
HIF3A-204ENST00000300862 SEMA6AQ9H2E6 1030 aa12.94□□□□□ -0.34
HIF3A-204ENST00000300862 SPC25Q9HBM1 224 aa12.94□□□□□ -0.34
HIF3A-204ENST00000300862 ARNT2Q9HBZ2 717 aa12.94□□□□□ -0.34
HIF3A-204ENST00000300862 ATP13A1Q9HD20 1204 aa12.94□□□□□ -0.34
HIF3A-204ENST00000300862 PRDM5Q9NQX1 630 aaPredicted RBP12.94□□□□□ -0.34
HIF3A-204ENST00000300862 SLC27A5Q9Y2P5 690 aa12.94□□□□□ -0.34
HIF3A-204ENST00000300862 C9JVG2 144 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 PSMD12O00232 456 aaPredicted RBP12.93□□□□□ -0.34
HIF3A-204ENST00000300862 MUSKO15146 869 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 SLC22A2O15244 555 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 HNRNPRO43390 633 aaKnown RBP12.93□□□□□ -0.34
HIF3A-204ENST00000300862 PEX1O43933 1283 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 GPC4O75487 556 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 RNASEH2AO75792 299 aaKnown RBP12.93□□□□□ -0.34
HIF3A-204ENST00000300862 BCAS2O75934 225 aaPredicted RBP12.93□□□□□ -0.34
HIF3A-204ENST00000300862 SIX3O95343 332 aaPredicted RBP12.93□□□□□ -0.34
HIF3A-204ENST00000300862 DNAJB1P25685 340 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 ADSLP30566 484 aaPredicted RBP12.93□□□□□ -0.34
HIF3A-204ENST00000300862 HTR7P34969 479 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 GALNT3Q14435 633 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.93□□□□□ -0.34
HIF3A-204ENST00000300862 PITRM1Q5JRX3 1037 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 RARS2Q5T160 578 aaKnown RBP12.93□□□□□ -0.34
HIF3A-204ENST00000300862 C6orf52Q5T4I8 152 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 IL23RQ5VWK5 629 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 CYHR1Q6ZMK1 362 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 ISCA2Q86U28 154 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 RTN4RL1Q86UN2 441 aaPredicted RBP12.93□□□□□ -0.34
HIF3A-204ENST00000300862 IFNL1Q8IU54 200 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 CALML6Q8TD86 181 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 C3orf30Q96M34 536 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 SEMA3CQ99985 751 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 GSTO2Q9H4Y5 243 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 PTTG2Q9NZH5 202 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 VPS28Q9UK41 221 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 PCDHB8Q9UN66 801 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 SCML2Q9UQR0 700 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 TRAF6Q9Y4K3 522 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 COL4A4P53420 1690 aaPredicted RBP12.93□□□□□ -0.34
HIF3A-204ENST00000300862 FNDC1Q4ZHG4 1894 aaPredicted RBP12.93□□□□□ -0.34
HIF3A-204ENST00000300862 MYO16Q9Y6X6 1858 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 CSPG5O95196 566 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 CRTAMO95727 393 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 RHOQP17081 205 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 TYMPP19971 482 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 SH3BGRP55822 239 aaPredicted RBP12.93□□□□□ -0.34
HIF3A-204ENST00000300862 CDKL1Q00532 357 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 MAP7Q14244 749 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 CYP2R1Q6VVX0 501 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 ZNF598Q86UK7 904 aaKnown RBP12.93□□□□□ -0.34
HIF3A-204ENST00000300862 CFAP52Q8N1V2 620 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 METTL25Q8N6Q8 603 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 OR13C4Q8NGS5 318 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 ARRDC2Q8TBH0 407 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 SLC45A3Q96JT2 553 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 C1orf74Q96LT6 269 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 RPRD1AQ96P16 312 aaPredicted RBP12.93□□□□□ -0.34
HIF3A-204ENST00000300862 BTBD9Q96Q07 612 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 RGS18Q9NS28 235 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 CACNA2D2Q9NY47 1150 aa12.93□□□□□ -0.34
HIF3A-204ENST00000300862 MROH6A6NGR9 719 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 LDB2O43679 373 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 TFAP2AP05549 437 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 RBP1P09455 135 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 ATXN1LP0C7T5 689 aaKnown RBP12.92□□□□□ -0.34
HIF3A-204ENST00000300862 FGFR3P22607 806 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 RPL26P61254 145 aaKnown RBP12.92□□□□□ -0.34
HIF3A-204ENST00000300862 SEMA3AQ14563 771 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 POLD3Q15054 466 aaPredicted RBP12.92□□□□□ -0.34
HIF3A-204ENST00000300862 ACAP2Q15057 778 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 REP15Q6BDI9 236 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 ZNF549Q6P9A3 640 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 DNAJC14Q6Y2X3 702 aaPredicted RBP12.92□□□□□ -0.34
HIF3A-204ENST00000300862 RBM44Q6ZP01 1051 aaKnown RBP12.92□□□□□ -0.34
HIF3A-204ENST00000300862 CHSY3Q70JA7 882 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 PPP1R2P1Q96PQ5 205 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 MEAF6Q9HAF1 191 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 EML4Q9HC35 981 aaKnown RBP12.92□□□□□ -0.34
HIF3A-204ENST00000300862 APPL1Q9UKG1 709 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 AP4B1Q9Y6B7 739 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 PRORSD1PA6NEY8 169 aa12.92□□□□□ -0.34
HIF3A-204ENST00000300862 WASH4PA8MWX3 477 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms