RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 TUBP50607 506 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 BOP1Q14137 746 aaKnown RBP11.32□□□□□ -0.6
GCN1-201ENST00000300648 LACTB2Q53H82 288 aaPredicted RBP11.32□□□□□ -0.6
GCN1-201ENST00000300648 BRSK2Q8IWQ3 736 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 PGAM4Q8N0Y7 254 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 TTLL2Q9BWV7 592 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 OSGEPL1Q9H4B0 414 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 PTGS2P35354 604 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 ZBTB6Q15916 424 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 PAMR1Q6UXH9 720 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 DNAJC14Q6Y2X3 702 aaPredicted RBP11.32□□□□□ -0.6
GCN1-201ENST00000300648 DAW1Q8N136 415 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 FBXO30Q8TB52 745 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 SYT15Q9BQS2 421 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 ADARB2Q9NS39 739 aaKnown RBP11.32□□□□□ -0.6
GCN1-201ENST00000300648 CFL2Q9Y281 166 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 MRPS33Q9Y291 106 aaKnown RBP11.32□□□□□ -0.6
GCN1-201ENST00000300648 RPTORQ8N122 1335 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 CCL15-CCL14A0A0B4J2E2 113 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 SLC12A8A0AV02 714 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 CHURC1-FNTBB4DL54 471 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 AP5Z1O43299 807 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 NTSR2O95665 410 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 SERPINA3P01011 423 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 PKNOX1P55347 436 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 SUZ12Q15022 739 aaKnown RBP11.32□□□□□ -0.6
GCN1-201ENST00000300648 MED22Q15528 200 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 CCL15Q16663 113 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 GCNT7Q6ZNI0 430 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 NAT14Q8WUY8 206 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 PDE2AO00408 941 aaPredicted RBP11.32□□□□□ -0.6
GCN1-201ENST00000300648 SASH3O75995 380 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 USP43Q70EL4 1123 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 AKAP1Q92667 903 aaKnown RBP eCLIP11.32□□□□□ -0.63e-10■■□□□ 14.4
GCN1-201ENST00000300648 S100A14Q9HCY8 104 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 A0A0G2JPF8 293 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 HNRNPCL3B7ZW38 293 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 KMOO15229 486 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 CYP7B1O75881 506 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 CSPG5O95196 566 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 HNRNPCL4P0DMR1 293 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 CCNCP24863 283 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 LAMTOR4Q0VGL1 99 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 PIK3R6Q5UE93 754 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 BEND5Q7L4P6 421 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 ACSF2Q96CM8 615 aaPredicted RBP11.32□□□□□ -0.6
GCN1-201ENST00000300648 SCGB3A2Q96PL1 93 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 AGO4Q9HCK5 861 aaKnown RBP11.32□□□□□ -0.6
GCN1-201ENST00000300648 SUCOQ9UBS9 1254 aaKnown RBP11.32□□□□□ -0.6
GCN1-201ENST00000300648 PCP4L1A6NKN8 68 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 DDX3YO15523 660 aaKnown RBP11.32□□□□□ -0.6
GCN1-201ENST00000300648 LIASO43766 372 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 CAP2P40123 477 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 HSFY1Q96LI6 401 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 YTHDF1Q9BYJ9 559 aaKnown RBP11.32□□□□□ -0.6
GCN1-201ENST00000300648 RIOX1Q9H6W3 641 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 AXIN2Q9Y2T1 843 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 PCDHB12Q9Y5F1 795 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 FADS3Q9Y5Q0 445 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 C3P01024 1663 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 SPATA31A5Q5VU36 1347 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 SPATA31A7Q8IWB4 1347 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 PDCD5O14737 125 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 OR5F1O95221 314 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 APOL3O95236 402 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 PARNO95453 639 aaKnown RBP11.32□□□□□ -0.6
GCN1-201ENST00000300648 DCKP27707 260 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 TAS2R41P59536 307 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 SNRPD1P62314 119 aaKnown RBP11.32□□□□□ -0.6
GCN1-201ENST00000300648 IRF8Q02556 426 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 TRIM32Q13049 653 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 UROC1Q96N76 676 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 MGME1Q9BQP7 344 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 ATP13A3Q9H7F0 1226 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.32□□□□□ -0.6
GCN1-201ENST00000300648 COG5Q9UP83 839 aa11.32□□□□□ -0.6
GCN1-201ENST00000300648 AZIN1O14977 448 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 PLIN3O60664 434 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 NR2F1P10589 423 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 CRHR1P34998 444 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 OVOS1Q6IE37 1185 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 XYLBO75191 536 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 BTN3A2P78410 334 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 IL18R1Q13478 541 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 BLMHQ13867 455 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 TEAD4Q15561 434 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 FAM153CQ494X1 144 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 ANO7Q6IWH7 933 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 KIAA0895Q8NCT3 520 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 WNT8BQ93098 351 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 ZC3H10Q96K80 434 aaKnown RBP11.31□□□□□ -0.6
GCN1-201ENST00000300648 ATP13A1Q9HD20 1204 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 KCNE2Q9Y6J6 123 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 ITGA10O75578 1167 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 RLN1P04808 185 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 HNRNPH3P31942 346 aaKnown RBP11.31□□□□□ -0.6
GCN1-201ENST00000300648 SLC27A1Q6PCB7 646 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 P2RY8Q86VZ1 359 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 C18orf25Q96B23 403 aaPredicted RBP11.31□□□□□ -0.6
GCN1-201ENST00000300648 CENPNQ96H22 339 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms