RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 FUBP1Q96AE4 644 aaKnown RBP13.92□□□□□ -0.18
TMEM41B-201ENST00000299596 RBM15Q96T37 977 aaKnown RBP eCLIP13.92□□□□□ -0.181e-6■■□□□ 12.1
TMEM41B-201ENST00000299596 NOD2Q9HC29 1040 aa13.92□□□□□ -0.18
TMEM41B-201ENST00000299596 GULP1Q9UBP9 304 aa13.92□□□□□ -0.18
TMEM41B-201ENST00000299596 B4GALT6Q9UBX8 382 aa13.92□□□□□ -0.18
TMEM41B-201ENST00000299596 LCMT1Q9UIC8 334 aa13.92□□□□□ -0.18
TMEM41B-201ENST00000299596 PHTF1Q9UMS5 762 aa13.92□□□□□ -0.18
TMEM41B-201ENST00000299596 CACNA1GO43497 2377 aa13.92□□□□□ -0.18
TMEM41B-201ENST00000299596 LOC400499M0QZD8 3231 aa13.92□□□□□ -0.18
TMEM41B-201ENST00000299596 CPP00450 1065 aa13.91□□□□□ -0.18
TMEM41B-201ENST00000299596 MPOP05164 745 aa13.91□□□□□ -0.18
TMEM41B-201ENST00000299596 CELA2BP08218 269 aaPredicted RBP13.91□□□□□ -0.18
TMEM41B-201ENST00000299596 H2AFZP0C0S5 128 aa13.91□□□□□ -0.18
TMEM41B-201ENST00000299596 CYP2A6P11509 494 aaPredicted RBP13.91□□□□□ -0.18
TMEM41B-201ENST00000299596 ITPKBP27987 946 aa13.91□□□□□ -0.18
TMEM41B-201ENST00000299596 VIPR1P32241 457 aa13.91□□□□□ -0.18
TMEM41B-201ENST00000299596 ERVPABLB-1P60509 514 aa13.91□□□□□ -0.18
TMEM41B-201ENST00000299596 GABREP78334 506 aa13.91□□□□□ -0.18
TMEM41B-201ENST00000299596 SKOR2Q2VWA4 1001 aaPredicted RBP13.91□□□□□ -0.18
TMEM41B-201ENST00000299596 PERM1Q5SV97 790 aa13.91□□□□□ -0.18
TMEM41B-201ENST00000299596 PNCKQ6P2M8 343 aa13.91□□□□□ -0.18
TMEM41B-201ENST00000299596 H2AFVQ71UI9 128 aa13.91□□□□□ -0.18
TMEM41B-201ENST00000299596 MAP7D3Q8IWC1 876 aa13.91□□□□□ -0.18
TMEM41B-201ENST00000299596 KCTD6Q8NC69 237 aa13.91□□□□□ -0.18
TMEM41B-201ENST00000299596 PCDH19Q8TAB3 1148 aa13.91□□□□□ -0.18
TMEM41B-201ENST00000299596 COQ10AQ96MF6 247 aa13.91□□□□□ -0.18
TMEM41B-201ENST00000299596 CCDC3Q9BQI4 270 aa13.91□□□□□ -0.18
TMEM41B-201ENST00000299596 XPO4Q9C0E2 1151 aaKnown RBP13.91□□□□□ -0.18
TMEM41B-201ENST00000299596 WDR26Q9H7D7 661 aa13.91□□□□□ -0.18
TMEM41B-201ENST00000299596 CTTNBP2NLQ9P2B4 639 aa13.91□□□□□ -0.18
TMEM41B-201ENST00000299596 UVRAGQ9P2Y5 699 aa13.91□□□□□ -0.18
TMEM41B-201ENST00000299596 NENFQ9UMX5 172 aa13.91□□□□□ -0.18
TMEM41B-201ENST00000299596 GPR34Q9UPC5 381 aa13.91□□□□□ -0.18
TMEM41B-201ENST00000299596 TMEM202A6NGA9 273 aa13.9□□□□□ -0.18
TMEM41B-201ENST00000299596 PROSCO94903 275 aa13.9□□□□□ -0.18
TMEM41B-201ENST00000299596 HEXIM1O94992 359 aaKnown RBP13.9□□□□□ -0.18
TMEM41B-201ENST00000299596 KRT10P13645 584 aa13.9□□□□□ -0.18
TMEM41B-201ENST00000299596 GM2AP17900 193 aa13.9□□□□□ -0.18
TMEM41B-201ENST00000299596 CES1P23141 567 aa13.9□□□□□ -0.18
TMEM41B-201ENST00000299596 ARSEP51690 589 aa13.9□□□□□ -0.18
TMEM41B-201ENST00000299596 MAXP61244 160 aa13.9□□□□□ -0.18
TMEM41B-201ENST00000299596 MMRN1Q13201 1228 aa13.9□□□□□ -0.18
TMEM41B-201ENST00000299596 TRIM14Q14142 442 aa13.9□□□□□ -0.18
TMEM41B-201ENST00000299596 PAFAH1B3Q15102 231 aaKnown RBP13.9□□□□□ -0.18
TMEM41B-201ENST00000299596 PDK2Q15119 407 aa13.9□□□□□ -0.18
TMEM41B-201ENST00000299596 SLC18A3Q16572 532 aa13.9□□□□□ -0.18
TMEM41B-201ENST00000299596 CRTC1Q6UUV9 634 aa13.9□□□□□ -0.18
TMEM41B-201ENST00000299596 NDUFAF2Q8N183 169 aa13.9□□□□□ -0.18
TMEM41B-201ENST00000299596 CBARPQ8N350 705 aaPredicted RBP13.9□□□□□ -0.18
TMEM41B-201ENST00000299596 TEX26Q8N6G2 289 aa13.9□□□□□ -0.18
TMEM41B-201ENST00000299596 ZNF248Q8NDW4 579 aa13.9□□□□□ -0.18
TMEM41B-201ENST00000299596 OR8K1Q8NGG5 319 aa13.9□□□□□ -0.18
TMEM41B-201ENST00000299596 CTNNBL1Q8WYA6 563 aaPredicted RBP13.9□□□□□ -0.18
TMEM41B-201ENST00000299596 OR1E3Q8WZA6 343 aa13.9□□□□□ -0.18
TMEM41B-201ENST00000299596 SCRN2Q96FV2 425 aa13.9□□□□□ -0.18
TMEM41B-201ENST00000299596 HAUS2Q9NVX0 235 aa13.9□□□□□ -0.18
TMEM41B-201ENST00000299596 ENTPD2Q9Y5L3 495 aa13.9□□□□□ -0.18
TMEM41B-201ENST00000299596 MYLKQ15746 1914 aa13.9□□□□□ -0.18
TMEM41B-201ENST00000299596 PSMD11O00231 422 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 CBFA2T2O43439 604 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 PGLSO95336 258 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 KRT7P08729 469 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 CD48P09326 243 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 HOXB3P14651 431 aaPredicted RBP13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 GARSP41250 739 aaKnown RBP13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 PCBP4P57723 403 aaKnown RBP13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 GALNT2Q10471 571 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 TRAF2Q12933 501 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 ARHGEF7Q14155 803 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 SPIDRQ14159 915 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 DPYSL3Q14195 570 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 CNGA3Q16281 694 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 TSR1Q2NL82 804 aaKnown RBP13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 ARMC12Q5T9G4 340 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 SPECC1LQ69YQ0 1117 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 TIGD7Q6NT04 549 aaPredicted RBP13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 IGF2-ASQ6U949 168 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 USP45Q70EL2 814 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 TAF8Q7Z7C8 310 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 FATE1Q969F0 183 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 NUS1Q96E22 293 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 PDXPQ96GD0 296 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 ATXN7L3BQ96GX2 97 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 MCCC1Q96RQ3 725 aaPredicted RBP13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 ZNF670Q9BS34 389 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 POLR1EQ9GZS1 481 aaKnown RBP13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 FGF22Q9HCT0 170 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 NT5MQ9NPB1 228 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 THSD1Q9NS62 852 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 ZNHIT6Q9NWK9 470 aaKnown RBP13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 SIRPGQ9P1W8 387 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 AMACRQ9UHK6 382 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 PPIL1Q9Y3C6 166 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 PCDHGA8Q9Y5G5 932 aa13.9□□□□□ -0.19
TMEM41B-201ENST00000299596 NTN3O00634 580 aaPredicted RBP13.89□□□□□ -0.19
TMEM41B-201ENST00000299596 MATN3O15232 486 aa13.89□□□□□ -0.19
TMEM41B-201ENST00000299596 MYCLP1P12525 358 aaPredicted RBP13.89□□□□□ -0.19
TMEM41B-201ENST00000299596 CCNCP24863 283 aa13.89□□□□□ -0.19
TMEM41B-201ENST00000299596 RBMS1P29558 406 aaKnown RBP13.89□□□□□ -0.19
TMEM41B-201ENST00000299596 ITKQ08881 620 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms