RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 MMADHCQ9H3L0 296 aaPredicted RBP17.33■□□□□ 0.36
SHANK1-201ENST00000293441 XPR1Q9UBH6 696 aa17.33■□□□□ 0.36
SHANK1-201ENST00000293441 PCDHA2Q9Y5H9 948 aa17.33■□□□□ 0.36
SHANK1-201ENST00000293441 ARL5CA6NH57 179 aa17.33■□□□□ 0.36
SHANK1-201ENST00000293441 ERN1O75460 977 aaKnown RBP17.33■□□□□ 0.36
SHANK1-201ENST00000293441 SMPD1P17405 629 aa17.33■□□□□ 0.36
SHANK1-201ENST00000293441 KELP23276 732 aa17.33■□□□□ 0.36
SHANK1-201ENST00000293441 CYP4F2P78329 520 aa17.33■□□□□ 0.36
SHANK1-201ENST00000293441 FUT10Q6P4F1 479 aa17.33■□□□□ 0.36
SHANK1-201ENST00000293441 XYLT1Q86Y38 959 aa17.33■□□□□ 0.36
SHANK1-201ENST00000293441 ARNTL2Q8WYA1 636 aa17.33■□□□□ 0.36
SHANK1-201ENST00000293441 UPF1Q92900 1129 aaKnown RBP eCLIP17.33■□□□□ 0.36
SHANK1-201ENST00000293441 OXCT2Q9BYC2 517 aaPredicted RBP17.33■□□□□ 0.36
SHANK1-201ENST00000293441 FBXO5Q9UKT4 447 aa17.33■□□□□ 0.36
SHANK1-201ENST00000293441 CORO2BQ9UQ03 480 aa17.33■□□□□ 0.36
SHANK1-201ENST00000293441 TSC22D4Q9Y3Q8 395 aa17.33■□□□□ 0.36
SHANK1-201ENST00000293441 LRRC10BA6NIK2 292 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 KIF1CO43896 1103 aaKnown RBP17.32■□□□□ 0.36
SHANK1-201ENST00000293441 NFATC1O95644 943 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 CCNYL3P0C7X3 344 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 SEMA5AQ13591 1074 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 BMT2Q1RMZ1 405 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 CCDC92Q53HC0 331 aaPredicted RBP17.32■□□□□ 0.36
SHANK1-201ENST00000293441 LBX2Q6XYB7 198 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 C10orf107Q8IVU9 208 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 MCRS1Q96EZ8 462 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 AARSD1Q9BTE6 412 aaKnown RBP17.32■□□□□ 0.36
SHANK1-201ENST00000293441 LHX5Q9H2C1 402 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 DUS2Q9NX74 493 aaKnown RBP17.32■□□□□ 0.36
SHANK1-201ENST00000293441 CD84Q9UIB8 345 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 RAB21Q9UL25 225 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 C4BPBP20851 252 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 REM2Q8IYK8 340 aaPredicted RBP17.32■□□□□ 0.36
SHANK1-201ENST00000293441 PRELID2Q8N945 189 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 CCNDBP1O95273 360 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 INHAP05111 366 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 INTS6LQ5JSJ4 861 aaKnown RBP17.32■□□□□ 0.36
SHANK1-201ENST00000293441 SH3BP5LQ7L8J4 393 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 FAM220AQ7Z4H9 259 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 KCTD15Q96SI1 283 aaPredicted RBP17.32■□□□□ 0.36
SHANK1-201ENST00000293441 WRAP53Q9BUR4 548 aaKnown RBP17.32■□□□□ 0.36
SHANK1-201ENST00000293441 ACE2Q9BYF1 805 aaPredicted RBP17.32■□□□□ 0.36
SHANK1-201ENST00000293441 SAR1AQ9NR31 198 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 BTNL10A8MVZ5 291 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 WNT7AO00755 349 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 SLC28A2O43868 658 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 GMFGO60234 142 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 BUD31P41223 144 aaPredicted RBP17.32■□□□□ 0.36
SHANK1-201ENST00000293441 ERVK-21P61565 698 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 STRADAQ7RTN6 431 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 ART4Q93070 314 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 PANX1Q96RD7 426 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 DGCR6LQ9BY27 220 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 SGK2Q9HBY8 427 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 GLOD4Q9HC38 313 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 ZNF624Q9P2J8 865 aaPredicted RBP17.32■□□□□ 0.36
SHANK1-201ENST00000293441 MYRFQ9Y2G1 1151 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 ZFP37Q9Y6Q3 630 aaPredicted RBP17.32■□□□□ 0.36
SHANK1-201ENST00000293441 GLYATL1P3A0A0U1RQE8 302 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 RCCD1A6NED2 376 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 PARP15Q460N3 678 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 PACS1Q6VY07 963 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 CPXM1Q96SM3 734 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 ITPKAP23677 461 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 SLC25A3Q00325 362 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 UBAP2LQ14157 1087 aaKnown RBP17.32■□□□□ 0.36
SHANK1-201ENST00000293441 OFCC1Q8IZS5 231 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 VPS35Q96QK1 796 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 CXorf56Q9H5V9 222 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 PHPT1Q9NRX4 125 aaPredicted RBP17.32■□□□□ 0.36
SHANK1-201ENST00000293441 PACSIN3Q9UKS6 424 aa17.32■□□□□ 0.36
SHANK1-201ENST00000293441 CST3P01034 146 aaPredicted RBP17.31■□□□□ 0.36
SHANK1-201ENST00000293441 MCCC1Q96RQ3 725 aaPredicted RBP17.31■□□□□ 0.36
SHANK1-201ENST00000293441 SH3GL2Q99962 352 aa17.31■□□□□ 0.36
SHANK1-201ENST00000293441 TOR4AQ9NXH8 423 aa17.31■□□□□ 0.36
SHANK1-201ENST00000293441 COPG2Q9UBF2 871 aa17.31■□□□□ 0.36
SHANK1-201ENST00000293441 POLR3HQ9Y535 204 aaPredicted RBP17.31■□□□□ 0.36
SHANK1-201ENST00000293441 PTPN20Q4JDL3 420 aa17.31■□□□□ 0.36
SHANK1-201ENST00000293441 CKAP2Q8WWK9 683 aa17.31■□□□□ 0.36
SHANK1-201ENST00000293441 KLHL25Q9H0H3 589 aa17.31■□□□□ 0.36
SHANK1-201ENST00000293441 RAI2Q9Y5P3 530 aa17.31■□□□□ 0.36
SHANK1-201ENST00000293441 ATP6AP2A0A1C7CYW4 349 aa17.31■□□□□ 0.36
SHANK1-201ENST00000293441 ATP6AP2O75787 350 aa17.31■□□□□ 0.36
SHANK1-201ENST00000293441 COX4I1P13073 169 aa17.31■□□□□ 0.36
SHANK1-201ENST00000293441 PRG2P13727 222 aa17.31■□□□□ 0.36
SHANK1-201ENST00000293441 TACR2P21452 398 aa17.31■□□□□ 0.36
SHANK1-201ENST00000293441 CACNA2D1P54289 1103 aa17.31■□□□□ 0.36
SHANK1-201ENST00000293441 ATP6V0D1P61421 351 aa17.31■□□□□ 0.36
SHANK1-201ENST00000293441 NPAS4Q8IUM7 802 aa17.31■□□□□ 0.36
SHANK1-201ENST00000293441 KREMEN1Q96MU8 473 aa17.31■□□□□ 0.36
SHANK1-201ENST00000293441 KLRG2A4D1S0 409 aaPredicted RBP17.31■□□□□ 0.36
SHANK1-201ENST00000293441 ZNF37AP17032 561 aaPredicted RBP17.31■□□□□ 0.36
SHANK1-201ENST00000293441 BMP6P22004 513 aa17.31■□□□□ 0.36
SHANK1-201ENST00000293441 IRF2BP2Q7Z5L9 587 aa17.31■□□□□ 0.36
SHANK1-201ENST00000293441 TMPRSS11BQ86T26 416 aa17.31■□□□□ 0.36
SHANK1-201ENST00000293441 ST13P5Q8NFI4 369 aaPredicted RBP17.31■□□□□ 0.36
SHANK1-201ENST00000293441 ZNF398Q8TD17 642 aa17.31■□□□□ 0.36
SHANK1-201ENST00000293441 TRMT13Q9NUP7 481 aaKnown RBP17.31■□□□□ 0.36
SHANK1-201ENST00000293441 INTS7Q9NVH2 962 aaKnown RBP17.31■□□□□ 0.36
SHANK1-201ENST00000293441 CAMTA1Q9Y6Y1 1673 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms