RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 ZZZ3Q8IYH5 903 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 PIWIL2Q8TC59 973 aaKnown RBP8.75□□□□□ -1.01
NIPBL-201ENST00000282516 CPB2Q96IY4 423 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 PRICKLE1Q96MT3 831 aaPredicted RBP8.75□□□□□ -1.01
NIPBL-201ENST00000282516 MND1Q9BWT6 205 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 ZNHIT2Q9UHR6 403 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 MED14O60244 1454 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 TPRP12270 2363 aaKnown RBP8.75□□□□□ -1.01
NIPBL-201ENST00000282516 CTSKP43235 329 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 RPL38P63173 70 aaKnown RBP8.75□□□□□ -1.01
NIPBL-201ENST00000282516 GPR107Q5VW38 600 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 TMEM192Q8IY95 271 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 ZNF398Q8TD17 642 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 GIPC3Q8TF64 312 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 ATXN3LQ9H3M9 355 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 PEX16Q9Y5Y5 336 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 HMGCRP04035 888 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 PFKPQ01813 784 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 OR52E6Q96RD3 313 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 FBXO9Q9UK97 447 aaPredicted RBP8.75□□□□□ -1.01
NIPBL-201ENST00000282516 SNAP23O00161 211 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 FFAR3O14843 346 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 GPR42O15529 346 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 APOL3O95236 402 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 ZNF286BP0CG31 522 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 TPH1P17752 444 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 GNALP38405 381 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 TBC1D21Q8IYX1 336 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 MCOLN2Q8IZK6 566 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 HDDC3Q8N4P3 179 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 ANKFN1Q8N957 763 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 PANX1Q96RD7 426 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 MROH8Q9H579 483 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 AFDNP55196 1824 aaKnown RBP8.75□□□□□ -1.01
NIPBL-201ENST00000282516 MTHFD1P11586 935 aaKnown RBP8.75□□□□□ -1.01
NIPBL-201ENST00000282516 KLRC2P26717 231 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 MAZP56270 477 aaKnown RBP8.75□□□□□ -1.01
NIPBL-201ENST00000282516 PTPRNQ16849 979 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 FIGNQ5HY92 759 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 OR2L8Q8NGY9 312 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 EDEM1Q92611 657 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 TP53INP1Q96A56 240 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 C1GALT1C1Q96EU7 318 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 TBATAQ96M53 351 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 ZNF350Q9GZX5 532 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 COMMD4Q9H0A8 199 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 ZFP14Q9HCL3 533 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 MARCH2Q9P0N8 246 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 MYH1P12882 1939 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 MYH2Q9UKX2 1941 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 MYH4Q9Y623 1939 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 APOC4-APOC2K7ER74 178 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 DDX3YO15523 660 aaKnown RBP8.75□□□□□ -1.01
NIPBL-201ENST00000282516 APOC2P02655 101 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 CDH5P33151 784 aaPredicted RBP8.75□□□□□ -1.01
NIPBL-201ENST00000282516 ELF3P78545 371 aaPredicted RBP8.75□□□□□ -1.01
NIPBL-201ENST00000282516 PITPNAQ00169 270 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 ZNF268Q14587 947 aaPredicted RBP8.75□□□□□ -1.01
NIPBL-201ENST00000282516 ANGEL2Q5VTE6 544 aaKnown RBP8.75□□□□□ -1.01
NIPBL-201ENST00000282516 PIWIL4Q7Z3Z4 852 aaKnown RBP8.75□□□□□ -1.01
NIPBL-201ENST00000282516 CELF1Q92879 486 aaKnown RBP8.75□□□□□ -1.01
NIPBL-201ENST00000282516 PPCDCQ96CD2 204 aa8.75□□□□□ -1.01
NIPBL-201ENST00000282516 RPL26L1Q9UNX3 145 aaKnown RBP8.75□□□□□ -1.01
NIPBL-201ENST00000282516 A0A0A0MRY4 1105 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 C1QTNF3-AMACRE9PGA6 284 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 AXIN1O15169 862 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 OR1I1O60431 355 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 UROSP10746 265 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 RGS8P57771 180 aaPredicted RBP8.74□□□□□ -1.01
NIPBL-201ENST00000282516 SCARF1Q14162 830 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 MBOAT7Q96N66 472 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 SPATA13Q96N96 652 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 IL1RAPQ9NPH3 570 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 GULP1Q9UBP9 304 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 TSPAN16Q9UKR8 245 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 PCDHGB5Q9Y5G0 923 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 ASXL3Q9C0F0 2248 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 CASTOR2A6NHX0 329 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 PRMT5O14744 637 aaPredicted RBP8.74□□□□□ -1.01
NIPBL-201ENST00000282516 PDCD4Q53EL6 469 aaKnown RBP8.74□□□□□ -1.01
NIPBL-201ENST00000282516 STXBP5Q5T5C0 1151 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 RANBP3LQ86VV4 465 aaPredicted RBP8.74□□□□□ -1.01
NIPBL-201ENST00000282516 CHST4Q8NCG5 386 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 AP2M1Q96CW1 435 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 PGM2Q96G03 612 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 PRPF19Q9UMS4 504 aaKnown RBP8.74□□□□□ -1.01
NIPBL-201ENST00000282516 ALDH4A1P30038 563 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 PSMD5Q16401 504 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 AAGABQ6PD74 315 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 ACMSDQ8TDX5 336 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 PRAMEF33A0A0G2JMD5 474 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 PRAMEF10O60809 474 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 AMHP03971 560 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 SERPINA6P08185 405 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 SLC35G4P0C7Q5 338 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 FSHRP23945 695 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 CYP2C18P33260 490 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 CD86P42081 329 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 FOLH1Q04609 750 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 LAMTOR4Q0VGL1 99 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms