RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 HDAC3O15379 428 aa9.02□□□□□ -0.97
SEC16A-201ENST00000277537 ATF6P18850 670 aa9.02□□□□□ -0.97
SEC16A-201ENST00000277537 MZF1P28698 734 aaPredicted RBP9.02□□□□□ -0.97
SEC16A-201ENST00000277537 BTKQ06187 659 aa9.02□□□□□ -0.97
SEC16A-201ENST00000277537 TNFAIP8L3Q5GJ75 292 aa9.02□□□□□ -0.97
SEC16A-201ENST00000277537 CMTM8Q8IZV2 173 aa9.02□□□□□ -0.97
SEC16A-201ENST00000277537 SNX31Q8N9S9 440 aa9.02□□□□□ -0.97
SEC16A-201ENST00000277537 IL12RB2Q99665 862 aa9.02□□□□□ -0.97
SEC16A-201ENST00000277537 KIFC1Q9BW19 673 aa9.02□□□□□ -0.97
SEC16A-201ENST00000277537 ABHD14A-ACY1A0A1B0GW23 586 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 KPNA3O00505 521 aaPredicted RBP9.01□□□□□ -0.97
SEC16A-201ENST00000277537 H2AFYO75367 372 aaKnown RBP9.01□□□□□ -0.97
SEC16A-201ENST00000277537 RPP40O75818 363 aaKnown RBP9.01□□□□□ -0.97
SEC16A-201ENST00000277537 STC2O76061 302 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 LMNAP02545 664 aaKnown RBP9.01□□□□□ -0.97
SEC16A-201ENST00000277537 ALPIP09923 528 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 SERPINA4P29622 427 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 CYLC2Q14093 348 aaPredicted RBP9.01□□□□□ -0.97
SEC16A-201ENST00000277537 BOP1Q14137 746 aaKnown RBP9.01□□□□□ -0.97
SEC16A-201ENST00000277537 KIAA0930Q6ICG6 404 aaPredicted RBP9.01□□□□□ -0.97
SEC16A-201ENST00000277537 NAPRTQ6XQN6 538 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 SPNS2Q8IVW8 549 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 ACVR1CQ8NER5 493 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 BRSK1Q8TDC3 778 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 PRR11Q96HE9 360 aaPredicted RBP9.01□□□□□ -0.97
SEC16A-201ENST00000277537 WWOXQ9NZC7 414 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 DICER1Q9UPY3 1922 aaKnown RBP9.01□□□□□ -0.97
SEC16A-201ENST00000277537 ANGPT2O15123 496 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 UBDO15205 165 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 SH3BP5O60239 455 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 UGT2B4P06133 528 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 HIST1H2AGP0C0S8 130 aaPredicted RBP9.01□□□□□ -0.97
SEC16A-201ENST00000277537 HIST1H2ADP20671 130 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 PBLDP30039 288 aaPredicted RBP9.01□□□□□ -0.97
SEC16A-201ENST00000277537 RPL34P49207 117 aaKnown RBP9.01□□□□□ -0.97
SEC16A-201ENST00000277537 ARSDP51689 593 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 PKNOX1P55347 436 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 FAM189BP81408 668 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 SEMA3BQ13214 749 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 RBBP5Q15291 538 aaKnown RBP9.01□□□□□ -0.97
SEC16A-201ENST00000277537 C6orf10Q5SRN2 563 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 STXBP5Q5T5C0 1151 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 TPGS2Q68CL5 300 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 CAPRIN2Q6IMN6 1127 aaKnown RBP9.01□□□□□ -0.97
SEC16A-201ENST00000277537 FAM45BPQ6NSW5 357 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 CGB2Q6NT52 195 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 FAM45AQ8TCE6 357 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 PLD4Q96BZ4 506 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 ZNF333Q96JL9 665 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 HIST1H2AHQ96KK5 128 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 SMIM14Q96QK8 99 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 GPR21Q99679 349 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 HIST1H2AJQ99878 128 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 CLSTN3Q9BQT9 956 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 H2AFJQ9BTM1 129 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 DYRK4Q9NR20 520 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 MTRRQ9UBK8 725 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 BTRCQ9Y297 605 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 RAP2CQ9Y3L5 183 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 TMEM189-UBE2V1I3L0A0 370 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 TBC1D4O60343 1298 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 ATXN8OSP0DMR3 200 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 THRAP10827 490 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 NFKBIAP25963 317 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 IL2P60568 153 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 HSPA14Q0VDF9 509 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 TBL3Q12788 808 aaKnown RBP9.01□□□□□ -0.97
SEC16A-201ENST00000277537 PCLAFQ15004 111 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 CLEC6AQ6EIG7 209 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 SLC22A9Q8IVM8 553 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 C7orf61Q8IZ16 206 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 TRIM54Q9BYV2 358 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 RNF38Q9H0F5 515 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 CDH19Q9H159 772 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 SPATS2LQ9NUQ6 558 aaKnown RBP9.01□□□□□ -0.97
SEC16A-201ENST00000277537 ABCB8Q9NUT2 735 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 HECAQ9UBI9 543 aaPredicted RBP9.01□□□□□ -0.97
SEC16A-201ENST00000277537 ZMYM5Q9UJ78 669 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 SLC12A4Q9UP95 1085 aa9.01□□□□□ -0.97
SEC16A-201ENST00000277537 ZNF646O15015 1829 aaPredicted RBP9.01□□□□□ -0.97
SEC16A-201ENST00000277537 TMEM233B4DJY2 109 aa9□□□□□ -0.97
SEC16A-201ENST00000277537 PRAMEF11O60813 436 aa9□□□□□ -0.97
SEC16A-201ENST00000277537 PRSS56P0CW18 603 aa9□□□□□ -0.97
SEC16A-201ENST00000277537 ZNF7P17097 686 aaPredicted RBP9□□□□□ -0.97
SEC16A-201ENST00000277537 MAGEA6P43360 314 aa9□□□□□ -0.97
SEC16A-201ENST00000277537 FOXD4Q12950 439 aaPredicted RBP9□□□□□ -0.97
SEC16A-201ENST00000277537 ZNF789Q5FWF6 425 aa9□□□□□ -0.97
SEC16A-201ENST00000277537 TMEM198Q66K66 360 aa9□□□□□ -0.97
SEC16A-201ENST00000277537 AFTPHQ6ULP2 937 aa9□□□□□ -0.97
SEC16A-201ENST00000277537 PIWIL4Q7Z3Z4 852 aaKnown RBP9□□□□□ -0.97
SEC16A-201ENST00000277537 KLHL23Q8NBE8 558 aa9□□□□□ -0.97
SEC16A-201ENST00000277537 ZNF784Q8NCA9 323 aaPredicted RBP9□□□□□ -0.97
SEC16A-201ENST00000277537 RBM15BQ8NDT2 890 aaKnown RBP9□□□□□ -0.97
SEC16A-201ENST00000277537 FAM13CQ8NE31 585 aa9□□□□□ -0.97
SEC16A-201ENST00000277537 CEP70Q8NHQ1 597 aa9□□□□□ -0.97
SEC16A-201ENST00000277537 PTCD2Q8WV60 388 aaKnown RBP9□□□□□ -0.97
SEC16A-201ENST00000277537 INPP5DQ92835 1189 aa9□□□□□ -0.97
SEC16A-201ENST00000277537 IMP4Q96G21 291 aaKnown RBP9□□□□□ -0.97
SEC16A-201ENST00000277537 CDKN2AIPNLQ96HQ2 116 aa9□□□□□ -0.97
SEC16A-201ENST00000277537 DHRS4Q9BTZ2 278 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms