RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 TTC8Q8TAM2 541 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 SPPL3Q8TCT6 385 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 SCG3Q8WXD2 468 aaKnown RBP9.61□□□□□ -0.87
TRIM55-201ENST00000276573 BHMTQ93088 406 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 UBXN10Q96LJ8 280 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 GCNAQ96QF7 691 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 SMIM14Q96QK8 99 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 DRC3Q9H069 523 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 ILKAPQ9H0C8 392 aaPredicted RBP9.61□□□□□ -0.87
TRIM55-201ENST00000276573 MRPL46Q9H2W6 279 aaKnown RBP9.61□□□□□ -0.87
TRIM55-201ENST00000276573 ASAH2Q9NR71 780 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 CATSPERZQ9NTU4 200 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 DNAJC28Q9NX36 388 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 XPR1Q9UBH6 696 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 PRKAG2Q9UGJ0 569 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 CORO1CQ9ULV4 474 aaPredicted RBP9.61□□□□□ -0.87
TRIM55-201ENST00000276573 CRYL1Q9Y2S2 319 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 LCHNA4D1U4 455 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 CAPN14A8MX76 684 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 FZD6O60353 706 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 WISP3O95389 354 aaPredicted RBP9.61□□□□□ -0.87
TRIM55-201ENST00000276573 LTA4HP09960 611 aaKnown RBP9.61□□□□□ -0.87
TRIM55-201ENST00000276573 CCDC166P0CW27 439 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 LPOP22079 712 aaPredicted RBP9.61□□□□□ -0.87
TRIM55-201ENST00000276573 SLC26A3P40879 764 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 CCR2P41597 374 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 ABL2P42684 1182 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 GRIA4P48058 902 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 NAGLUP54802 743 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 RHOAP61586 193 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 ASPHQ12797 758 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 CSHL1Q14406 222 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 AGAP9Q5VTM2 703 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 PLPP4Q5VZY2 271 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 FAM45BPQ6NSW5 357 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 MAVSQ7Z434 540 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 GLT6D1Q7Z4J2 308 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 UBE2Q1Q7Z7E8 422 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 SPNS2Q8IVW8 549 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 FAM45AQ8TCE6 357 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 UTP4Q969X6 686 aaKnown RBP9.61□□□□□ -0.87
TRIM55-201ENST00000276573 MOCOSQ96EN8 888 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 RAB3IPQ96QF0 476 aaPredicted RBP9.61□□□□□ -0.87
TRIM55-201ENST00000276573 CDH19Q9H159 772 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 GPAMQ9HCL2 828 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 HCFC1R1Q9NWW0 138 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 KIAA1522Q9P206 1035 aaPredicted RBP9.61□□□□□ -0.87
TRIM55-201ENST00000276573 CLEC4EQ9ULY5 219 aa9.61□□□□□ -0.87
TRIM55-201ENST00000276573 APOBEC2Q9Y235 224 aaKnown RBP9.61□□□□□ -0.87
TRIM55-201ENST00000276573 FCF1Q9Y324 198 aaKnown RBP9.61□□□□□ -0.87
TRIM55-201ENST00000276573 K7ERQ8 282 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 TLL1O43897 1013 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 SERPINA6P08185 405 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 RBP1P09455 135 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 ESRRAP11474 423 aaPredicted RBP9.6□□□□□ -0.87
TRIM55-201ENST00000276573 HOXB8P17481 243 aaPredicted RBP9.6□□□□□ -0.87
TRIM55-201ENST00000276573 PTPN2P17706 415 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 FDXRP22570 491 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 CALB2P22676 271 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 ATP5F1P24539 256 aaPredicted RBP9.6□□□□□ -0.87
TRIM55-201ENST00000276573 PMLP29590 882 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 CTNNB1P35222 781 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 CLCN4P51793 760 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 STC1P52823 247 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 DNAJB13P59910 316 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 TIAL1Q01085 375 aaKnown RBP eCLIP9.6□□□□□ -0.87
TRIM55-201ENST00000276573 PFKPQ01813 784 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 LMAN2Q12907 356 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 USP4Q13107 963 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 RIPK1Q13546 671 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 ACAP2Q15057 778 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 TECRLQ5HYJ1 363 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 ATXN7L2Q5T6C5 722 aaPredicted RBP9.6□□□□□ -0.87
TRIM55-201ENST00000276573 RETSATQ6NUM9 610 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 TMEM207Q6UWW9 146 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 TPGS1Q6ZTW0 290 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 RTL10Q7L3V2 364 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 TREML1Q86YW5 311 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 TTC30BQ8N4P2 665 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 ZNF781Q8N8C0 355 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 SHKBP1Q8TBC3 707 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 PHOSPHO2Q8TCD6 241 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 PDCD6IPQ8WUM4 868 aaKnown RBP9.6□□□□□ -0.87
TRIM55-201ENST00000276573 ANKRD49Q8WVL7 239 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 POF1BQ8WVV4 589 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 HERVK_113Q902F9 699 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 ACDQ96AP0 544 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 TCF12Q99081 682 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 C2orf49Q9BVC5 232 aaPredicted RBP9.6□□□□□ -0.87
TRIM55-201ENST00000276573 CCDC106Q9BWC9 280 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 TBC1D10AQ9BXI6 508 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 UNKQ9C0B0 810 aaKnown RBP9.6□□□□□ -0.87
TRIM55-201ENST00000276573 TLE6Q9H808 572 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 INTS10Q9NVR2 710 aaKnown RBP9.6□□□□□ -0.87
TRIM55-201ENST00000276573 PLK2Q9NYY3 685 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 ARMCX1Q9P291 453 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 ARHGAP26Q9UNA1 814 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 SORCS3Q9UPU3 1222 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 STK38LQ9Y2H1 464 aa9.6□□□□□ -0.87
TRIM55-201ENST00000276573 RAP2CQ9Y3L5 183 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms